RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
CBWD3-208ENST00000612050 COX6A2Q02221 97 aa7.92□□□□□ -1.14
CBWD3-208ENST00000612050 CAMK2N2Q96S95 79 aa7.92□□□□□ -1.14
CBWD3-208ENST00000612050 RPS10P5Q9NQ39 176 aa7.92□□□□□ -1.14
CBWD3-208ENST00000612050 PYGO1Q9Y3Y4 419 aa7.92□□□□□ -1.14
CBWD3-208ENST00000612050 LINC01549A6NIU2 74 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 MT-ND6P03923 174 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 C5orf38Q86SI9 138 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 OR10D4PQ8NGN7 298 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 PRSS3P2Q8NHM4 247 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 C7orf33Q8WU49 177 aa7.91□□□□□ -1.14
CBWD3-208ENST00000612050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.91□□□□□ -1.14
CBWD3-208ENST00000612050 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 IGKV2-24A0A0C4DH68 120 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 SLPIP03973 132 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 NPSP0C0P6 89 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 MAJINQ3KP22 176 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 C2orf66Q6UXQ4 117 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.14
CBWD3-208ENST00000612050 F8WDY8 70 aa7.89□□□□□ -1.15
CBWD3-208ENST00000612050 SPAG11BQ08648 103 aa7.89□□□□□ -1.15
CBWD3-208ENST00000612050 CIRBPQ14011 172 aaKnown RBP7.89□□□□□ -1.15
CBWD3-208ENST00000612050 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
CBWD3-208ENST00000612050 C2orf48Q96LS8 159 aa7.89□□□□□ -1.15
CBWD3-208ENST00000612050 VCX2Q9H322 139 aa7.89□□□□□ -1.15
CBWD3-208ENST00000612050 CARHSP1Q9Y2V2 147 aaKnown RBP7.89□□□□□ -1.15
CBWD3-208ENST00000612050 A0A087WYN8 130 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 LOC107984640A0A0U1RRK4 108 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 SNAPINO95295 136 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 SEC11AP67812 179 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 ORAOV1Q8WV07 137 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 SMCO4Q9NRQ5 59 aa7.88□□□□□ -1.15
CBWD3-208ENST00000612050 IGLV4-3A0A075B6K6 122 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 CHTF8P0CG12 524 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 KIAA1644Q3SXP7 199 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 SVBPQ8N300 66 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 STPG4Q8N801 248 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 LINC00526Q96FQ7 95 aa7.87□□□□□ -1.15
CBWD3-208ENST00000612050 OPRPNQ99935 248 aaPredicted RBP7.87□□□□□ -1.15
CBWD3-208ENST00000612050 NDUFA1O15239 70 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 APOC3P02656 99 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 FABP9Q0Z7S8 132 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 C10orf91Q5T1B1 145 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 IGHV3OR16-9A0A0B4J2B5 98 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 FA2HQ7L5A8 372 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 MRPL18Q9H0U6 180 aaKnown RBP7.86□□□□□ -1.15
CBWD3-208ENST00000612050 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
CBWD3-208ENST00000612050 A0A096LNI7 61 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 PANO1I0J062 215 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 PRSS2P07478 247 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 GAGE2BQ13066 116 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 Q6ZRU5 148 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 PACRGQ96M98 296 aaPredicted RBP7.85□□□□□ -1.15
CBWD3-208ENST00000612050 GEMIN7Q9H840 131 aaKnown RBP7.85□□□□□ -1.15
CBWD3-208ENST00000612050 ABCA13Q86UQ4 5058 aa7.85□□□□□ -1.15
CBWD3-208ENST00000612050 A0A087WZ39 114 aa7.84□□□□□ -1.15
CBWD3-208ENST00000612050 RPL18AQ02543 176 aaKnown RBP7.84□□□□□ -1.15
CBWD3-208ENST00000612050 RNF151Q2KHN1 245 aa7.84□□□□□ -1.15
CBWD3-208ENST00000612050 TOMM6Q96B49 74 aa7.84□□□□□ -1.15
CBWD3-208ENST00000612050 SCGB3A1Q96QR1 104 aa7.84□□□□□ -1.15
CBWD3-208ENST00000612050 TIMM17AQ99595 171 aa7.84□□□□□ -1.15
CBWD3-208ENST00000612050 UBE2D1P51668 147 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 HERVK_113P63121 156 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 ERASQ7Z444 233 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 LINC01561Q8N1V8 128 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
CBWD3-208ENST00000612050 MRPL35Q9NZE8 188 aaKnown RBP7.83□□□□□ -1.16
CBWD3-208ENST00000612050 TRAPPC1Q9Y5R8 145 aa7.83□□□□□ -1.16
CBWD3-208ENST00000612050 PTTG1IPP53801 180 aa7.82□□□□□ -1.16
CBWD3-208ENST00000612050 AMELXQ99217 191 aa7.82□□□□□ -1.16
CBWD3-208ENST00000612050 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
CBWD3-208ENST00000612050 CKS1BP61024 79 aa7.81□□□□□ -1.16
CBWD3-208ENST00000612050 RAB5BP61020 215 aa7.8□□□□□ -1.16
CBWD3-208ENST00000612050 FAM104AQ969W3 186 aa7.8□□□□□ -1.16
CBWD3-208ENST00000612050 OXTP01178 125 aa7.79□□□□□ -1.16
CBWD3-208ENST00000612050 C6orf226Q5I0X4 101 aa7.79□□□□□ -1.16
CBWD3-208ENST00000612050 TOMM7Q9P0U1 55 aa7.79□□□□□ -1.16
CBWD3-208ENST00000612050 DNAH8Q96JB1 4490 aa7.79□□□□□ -1.16
CBWD3-208ENST00000612050 TRBV30A0A0K0K1B3 111 aa7.78□□□□□ -1.16
CBWD3-208ENST00000612050 KRTAP29-1A8MX34 341 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-208ENST00000612050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.78□□□□□ -1.16
CBWD3-208ENST00000612050 LINC00173Q6ZV60 143 aa7.78□□□□□ -1.16
CBWD3-208ENST00000612050 FAM19A3Q7Z5A8 133 aa7.78□□□□□ -1.16
CBWD3-208ENST00000612050 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
CBWD3-208ENST00000612050 A0A0J9YXV3 536 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 LOC100996750A0A140TA64 210 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 LINC01546A6NGU7 62 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 LINC00614P0C842 121 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 CXCL5P42830 114 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 PMVKQ15126 192 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 UNQ6190/PRO20217Q6UXQ8 127 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 Q6ZRP5 223 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 Q8IZM0 81 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 KRTAP4-6Q9BYQ5 205 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
CBWD3-208ENST00000612050 H3BRM9 83 aa7.76□□□□□ -1.17
CBWD3-208ENST00000612050 TLX1NBP0CAT3 122 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms