RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 C2orf88Q9BSF0 95 aa11.53□□□□□ -0.56
MUC1-224ENST00000611577 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 MALP21145 153 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 FOXI1Q12951 378 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 PAPPA-AS1Q5QFB9 102 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 SCGB3A1Q96QR1 104 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 VCX2Q9H322 139 aa11.52□□□□□ -0.57
MUC1-224ENST00000611577 LINC01546A6NGU7 62 aa11.51□□□□□ -0.57
MUC1-224ENST00000611577 SCO1O75880 301 aa11.51□□□□□ -0.57
MUC1-224ENST00000611577 LINC00614P0C842 121 aa11.51□□□□□ -0.57
MUC1-224ENST00000611577 Q6ZSA8 131 aa11.51□□□□□ -0.57
MUC1-224ENST00000611577 COX7A2LO14548 114 aa11.5□□□□□ -0.57
MUC1-224ENST00000611577 TRGC2P03986 189 aa11.5□□□□□ -0.57
MUC1-224ENST00000611577 PRSS1P07477 247 aa11.5□□□□□ -0.57
MUC1-224ENST00000611577 NPSP0C0P6 89 aa11.5□□□□□ -0.57
MUC1-224ENST00000611577 TIMM17AQ99595 171 aa11.5□□□□□ -0.57
MUC1-224ENST00000611577 IGIPA6NJ69 53 aa11.49□□□□□ -0.57
MUC1-224ENST00000611577 ERASQ7Z444 233 aa11.49□□□□□ -0.57
MUC1-224ENST00000611577 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
MUC1-224ENST00000611577 IGHV1-58A0A0C4DH39 117 aa11.48□□□□□ -0.57
MUC1-224ENST00000611577 COLCA2A8K830 154 aa11.48□□□□□ -0.57
MUC1-224ENST00000611577 HIGD2BQ4VC39 106 aa11.48□□□□□ -0.57
MUC1-224ENST00000611577 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
MUC1-224ENST00000611577 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
MUC1-224ENST00000611577 BAGE3Q86Y29 109 aa11.47□□□□□ -0.57
MUC1-224ENST00000611577 C15orf56Q8N910 161 aa11.47□□□□□ -0.57
MUC1-224ENST00000611577 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.46□□□□□ -0.57
MUC1-224ENST00000611577 APOMO95445 188 aa11.46□□□□□ -0.57
MUC1-224ENST00000611577 HBDP02042 147 aa11.46□□□□□ -0.57
MUC1-224ENST00000611577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.45□□□□□ -0.58
MUC1-224ENST00000611577 ZNF561-AS1K7EIQ3 104 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 S100A1P23297 94 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 LINC01620Q4KN68 170 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 ZC2HC1BQ5TFG8 222 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 SCXQ7RTU7 201 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 AMELXQ99217 191 aa11.45□□□□□ -0.58
MUC1-224ENST00000611577 UBE2D1P51668 147 aa11.44□□□□□ -0.58
MUC1-224ENST00000611577 CHCHD1Q96BP2 118 aaKnown RBP11.44□□□□□ -0.58
MUC1-224ENST00000611577 GVQW2A0A096LPI5 108 aaPredicted RBP11.43□□□□□ -0.58
MUC1-224ENST00000611577 LINC00173Q6ZV60 143 aa11.43□□□□□ -0.58
MUC1-224ENST00000611577 ATP6V1G1O75348 118 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 HSBP1O75506 76 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 NDUFA6P56556 154 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 SEC11AP67812 179 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
MUC1-224ENST00000611577 PKHD1L1Q86WI1 4243 aa11.42□□□□□ -0.58
MUC1-224ENST00000611577 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
MUC1-224ENST00000611577 A0A096LNJ9 63 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 ATP5LO75964 103 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 HERVK_113P63121 156 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 PMVKQ15126 192 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 C9orf163Q8N9P6 203 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 ORAOV1Q8WV07 137 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 PLA2G2DQ9UNK4 145 aa11.4□□□□□ -0.58
MUC1-224ENST00000611577 IGHV3-64A0A075B6Q5 118 aa11.39□□□□□ -0.59
MUC1-224ENST00000611577 OXTP01178 125 aa11.39□□□□□ -0.59
MUC1-224ENST00000611577 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
MUC1-224ENST00000611577 COX6A2Q02221 97 aa11.39□□□□□ -0.59
MUC1-224ENST00000611577 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
MUC1-224ENST00000611577 OR10D4PQ8NGN7 298 aa11.38□□□□□ -0.59
MUC1-224ENST00000611577 CHAC1Q9BUX1 264 aa11.38□□□□□ -0.59
MUC1-224ENST00000611577 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
MUC1-224ENST00000611577 IGLV4-69A0A075B6H9 119 aa11.37□□□□□ -0.59
MUC1-224ENST00000611577 A0A087WZ39 114 aa11.37□□□□□ -0.59
MUC1-224ENST00000611577 A0A0J9YXV3 536 aa11.37□□□□□ -0.59
MUC1-224ENST00000611577 PDZD11Q5EBL8 140 aa11.37□□□□□ -0.59
MUC1-224ENST00000611577 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
MUC1-224ENST00000611577 PACRGQ96M98 296 aaPredicted RBP11.37□□□□□ -0.59
MUC1-224ENST00000611577 SERF1AO75920 110 aa11.36□□□□□ -0.59
MUC1-224ENST00000611577 SYCNQ0VAF6 134 aa11.36□□□□□ -0.59
MUC1-224ENST00000611577 FAM19A3Q7Z5A8 133 aa11.36□□□□□ -0.59
MUC1-224ENST00000611577 CIRBP-AS1Q8TBR5 109 aa11.36□□□□□ -0.59
MUC1-224ENST00000611577 CAMK2N2Q96S95 79 aa11.36□□□□□ -0.59
MUC1-224ENST00000611577 SLPIP03973 132 aa11.35□□□□□ -0.59
MUC1-224ENST00000611577 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
MUC1-224ENST00000611577 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
MUC1-224ENST00000611577 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
MUC1-224ENST00000611577 PRSS2P07478 247 aa11.34□□□□□ -0.59
MUC1-224ENST00000611577 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
MUC1-224ENST00000611577 PKIGQ9Y2B9 76 aa11.34□□□□□ -0.59
MUC1-224ENST00000611577 LINC01561Q8N1V8 128 aa11.33□□□□□ -0.6
MUC1-224ENST00000611577 IFI27L1Q96BM0 104 aa11.33□□□□□ -0.6
MUC1-224ENST00000611577 TOMM7Q9P0U1 55 aa11.33□□□□□ -0.6
MUC1-224ENST00000611577 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
MUC1-224ENST00000611577 DPH3Q96FX2 82 aa11.32□□□□□ -0.6
MUC1-224ENST00000611577 NDUFA1O15239 70 aa11.31□□□□□ -0.6
MUC1-224ENST00000611577 SDIM1Q6ZPB5 146 aa11.31□□□□□ -0.6
MUC1-224ENST00000611577 H3BRM9 83 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BKO60814 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BJP06899 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BOP23527 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BBP33778 126 aa11.3□□□□□ -0.6
MUC1-224ENST00000611577 HIST1H2BDP58876 126 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms