RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 CIRBPQ14011 172 aaKnown RBP8.56□□□□□ -1.04
SENP3-209ENST00000610454 NDUFA5Q16718 116 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 KIAA1644Q3SXP7 199 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 C2orf66Q6UXQ4 117 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 TEX43Q6ZNM6 134 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 LINC00474Q9P2X8 69 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
SENP3-209ENST00000610454 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 A0A087WYN8 130 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 C10orf91Q5T1B1 145 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 CAMK2N2Q96S95 79 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
SENP3-209ENST00000610454 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
SENP3-209ENST00000610454 IGLV4-3A0A075B6K6 122 aa8.54□□□□□ -1.04
SENP3-209ENST00000610454 MT-ND6P03923 174 aa8.54□□□□□ -1.04
SENP3-209ENST00000610454 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
SENP3-209ENST00000610454 OR10D4PQ8NGN7 298 aa8.54□□□□□ -1.04
SENP3-209ENST00000610454 PAPPA-AS1Q5QFB9 102 aa8.53□□□□□ -1.04
SENP3-209ENST00000610454 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
SENP3-209ENST00000610454 VCX2Q9H322 139 aa8.53□□□□□ -1.04
SENP3-209ENST00000610454 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
SENP3-209ENST00000610454 A0A096LNI7 61 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 APOC3P02656 99 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 NPSP0C0P6 89 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 STPG4Q8N801 248 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 C7orf33Q8WU49 177 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 FAM104AQ969W3 186 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
SENP3-209ENST00000610454 MRPL18Q9H0U6 180 aaKnown RBP8.52□□□□□ -1.05
SENP3-209ENST00000610454 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 SNAPINO95295 136 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 Q6ZRU5 148 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 SVBPQ8N300 66 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
SENP3-209ENST00000610454 SMCO4Q9NRQ5 59 aa8.5□□□□□ -1.05
SENP3-209ENST00000610454 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 F8WDY8 70 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 J3QL48 77 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 NDUFA1O15239 70 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 FA2HQ7L5A8 372 aa8.49□□□□□ -1.05
SENP3-209ENST00000610454 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
SENP3-209ENST00000610454 A0A087WZ39 114 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 IGIPA6NJ69 53 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 UBE2D1P51668 147 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 SEC11AP67812 179 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
SENP3-209ENST00000610454 TOMM6Q96B49 74 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 SCGB3A1Q96QR1 104 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
SENP3-209ENST00000610454 MYCBP2O75592 4640 aa8.47□□□□□ -1.05
SENP3-209ENST00000610454 PTTG1IPP53801 180 aa8.47□□□□□ -1.05
SENP3-209ENST00000610454 AMELXQ99217 191 aa8.47□□□□□ -1.05
SENP3-209ENST00000610454 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
SENP3-209ENST00000610454 PRSS2P07478 247 aa8.46□□□□□ -1.06
SENP3-209ENST00000610454 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
SENP3-209ENST00000610454 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
SENP3-209ENST00000610454 ZC2HC1BQ5TFG8 222 aa8.46□□□□□ -1.06
SENP3-209ENST00000610454 LINC00173Q6ZV60 143 aa8.46□□□□□ -1.06
SENP3-209ENST00000610454 ERASQ7Z444 233 aa8.46□□□□□ -1.06
SENP3-209ENST00000610454 GEMIN7Q9H840 131 aaKnown RBP8.46□□□□□ -1.06
SENP3-209ENST00000610454 MRPL35Q9NZE8 188 aaKnown RBP8.46□□□□□ -1.06
SENP3-209ENST00000610454 HERVK_113P63121 156 aa8.45□□□□□ -1.06
SENP3-209ENST00000610454 LINC01561Q8N1V8 128 aa8.45□□□□□ -1.06
SENP3-209ENST00000610454 PACRGQ96M98 296 aaPredicted RBP8.45□□□□□ -1.06
SENP3-209ENST00000610454 A0A0J9YXV3 536 aa8.44□□□□□ -1.06
SENP3-209ENST00000610454 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
SENP3-209ENST00000610454 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
SENP3-209ENST00000610454 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
SENP3-209ENST00000610454 TOMM7Q9P0U1 55 aa8.43□□□□□ -1.06
SENP3-209ENST00000610454 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
SENP3-209ENST00000610454 CKS1BP61024 79 aa8.42□□□□□ -1.06
SENP3-209ENST00000610454 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
SENP3-209ENST00000610454 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 OXTP01178 125 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 RAB5BP61020 215 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 C10orf25Q5T742 122 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 C6orf48Q9UBA6 75 aa8.41□□□□□ -1.06
SENP3-209ENST00000610454 LINC00614P0C842 121 aa8.4□□□□□ -1.06
SENP3-209ENST00000610454 KIAA0087Q14695 138 aa8.4□□□□□ -1.06
SENP3-209ENST00000610454 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.06
SENP3-209ENST00000610454 C2orf82Q6UX34 121 aa8.4□□□□□ -1.06
SENP3-209ENST00000610454 C18orf32Q8TCD1 76 aa8.4□□□□□ -1.06
SENP3-209ENST00000610454 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
SENP3-209ENST00000610454 TLX1NBP0CAT3 122 aa8.39□□□□□ -1.07
SENP3-209ENST00000610454 HNRNPA3P51991 378 aaKnown RBP8.39□□□□□ -1.07
SENP3-209ENST00000610454 PRR3P79522 188 aaKnown RBP8.39□□□□□ -1.07
SENP3-209ENST00000610454 PMVKQ15126 192 aa8.39□□□□□ -1.07
SENP3-209ENST00000610454 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
SENP3-209ENST00000610454 Q8IZM0 81 aa8.39□□□□□ -1.07
SENP3-209ENST00000610454 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms