RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BAALC-AS2P0C853 105 aa14.58□□□□□ -0.08
SSBP3-216ENST00000610401 GAGE2AQ6NT46 116 aa14.58□□□□□ -0.08
SSBP3-216ENST00000610401 A0A096LPF7 62 aa14.58□□□□□ -0.08
SSBP3-216ENST00000610401 H3BT86 120 aa14.57□□□□□ -0.08
SSBP3-216ENST00000610401 LINC00158P58513 81 aa14.57□□□□□ -0.08
SSBP3-216ENST00000610401 ITPR2Q14571 2701 aa14.57□□□□□ -0.08
SSBP3-216ENST00000610401 HERVK_113P63121 156 aa14.57□□□□□ -0.08
SSBP3-216ENST00000610401 C5orf38Q86SI9 138 aa14.57□□□□□ -0.08
SSBP3-216ENST00000610401 MIR7-3HGQ8N6C7 128 aa14.56□□□□□ -0.08
SSBP3-216ENST00000610401 OR13C6PQ8NH95 151 aa14.56□□□□□ -0.08
SSBP3-216ENST00000610401 IGHV4-31P0DP07 118 aa14.55□□□□□ -0.08
SSBP3-216ENST00000610401 SMCR5Q8TEV8 140 aa14.55□□□□□ -0.08
SSBP3-216ENST00000610401 VWFP04275 2813 aa14.54□□□□□ -0.08
SSBP3-216ENST00000610401 HIST2H2BCQ6DN03 193 aa14.54□□□□□ -0.08
SSBP3-216ENST00000610401 SVIPQ8NHG7 77 aa14.54□□□□□ -0.08
SSBP3-216ENST00000610401 K7EQD1 137 aa14.53□□□□□ -0.08
SSBP3-216ENST00000610401 SLPIP03973 132 aa14.53□□□□□ -0.08
SSBP3-216ENST00000610401 COX7A2LO14548 114 aa14.52□□□□□ -0.08
SSBP3-216ENST00000610401 DEFB130BP0DP73 79 aa14.52□□□□□ -0.09
SSBP3-216ENST00000610401 DEFB130AP0DP74 79 aa14.52□□□□□ -0.09
SSBP3-216ENST00000610401 CR1P17927 2039 aa14.52□□□□□ -0.09
SSBP3-216ENST00000610401 TIRAPP58753 221 aa14.51□□□□□ -0.09
SSBP3-216ENST00000610401 C9orf129Q5T035 196 aaKnown RBP14.51□□□□□ -0.09
SSBP3-216ENST00000610401 CDC42SE2Q9NRR3 84 aa14.51□□□□□ -0.09
SSBP3-216ENST00000610401 TRGV4A0A0C4DH28 118 aa14.5□□□□□ -0.09
SSBP3-216ENST00000610401 IGLV4-60A0A075B6I1 120 aa14.5□□□□□ -0.09
SSBP3-216ENST00000610401 RNASE1P07998 156 aaKnown RBP14.49□□□□□ -0.09
SSBP3-216ENST00000610401 A0A096LNT2 108 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 LINC00337Q8N6G1 96 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 DNAJC30Q96LL9 226 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 IGLV5-39A0A0G2JS06 123 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 PAX4O43316 350 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 CRPP02741 224 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 BEAN1Q3B7T3 259 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 TMEM243Q9BU79 118 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 SND1-IT1Q9HBX3 110 aa14.48□□□□□ -0.09
SSBP3-216ENST00000610401 M0QXV9 152 aa14.47□□□□□ -0.09
SSBP3-216ENST00000610401 C14orf132Q9NPU4 83 aa14.47□□□□□ -0.09
SSBP3-216ENST00000610401 A0A087WYN8 130 aa14.47□□□□□ -0.09
SSBP3-216ENST00000610401 C4orf3Q8WVX3 66 aa14.47□□□□□ -0.09
SSBP3-216ENST00000610401 ESM1Q9NQ30 184 aa14.47□□□□□ -0.09
SSBP3-216ENST00000610401 CCL24O00175 119 aa14.46□□□□□ -0.09
SSBP3-216ENST00000610401 HERV-K104P63124 156 aa14.46□□□□□ -0.1
SSBP3-216ENST00000610401 DSCR9P59020 149 aa14.45□□□□□ -0.1
SSBP3-216ENST00000610401 PRR3P79522 188 aaKnown RBP14.45□□□□□ -0.1
SSBP3-216ENST00000610401 IGLV5-45A0A087WSX0 123 aa14.45□□□□□ -0.1
SSBP3-216ENST00000610401 IGKV3D-7A0A0C4DH55 119 aa14.45□□□□□ -0.1
SSBP3-216ENST00000610401 F5H768 121 aa14.45□□□□□ -0.1
SSBP3-216ENST00000610401 XCL1P47992 114 aa14.45□□□□□ -0.1
SSBP3-216ENST00000610401 DNAL4O96015 105 aa14.44□□□□□ -0.1
SSBP3-216ENST00000610401 SHISA2Q6UWI4 295 aa14.44□□□□□ -0.1
SSBP3-216ENST00000610401 TIMM17BO60830 172 aa14.44□□□□□ -0.1
SSBP3-216ENST00000610401 SDIM1Q6ZPB5 146 aa14.44□□□□□ -0.1
SSBP3-216ENST00000610401 EDA2RQ9HAV5 297 aa14.43□□□□□ -0.1
SSBP3-216ENST00000610401 KLK5Q9Y337 293 aaPredicted RBP14.43□□□□□ -0.1
SSBP3-216ENST00000610401 J3QLI3 93 aa14.42□□□□□ -0.1
SSBP3-216ENST00000610401 COX7B2Q8TF08 81 aa14.42□□□□□ -0.1
SSBP3-216ENST00000610401 SMIM11BQ8TCY0 68 aa14.42□□□□□ -0.1
SSBP3-216ENST00000610401 LECT2O14960 151 aa14.41□□□□□ -0.1
SSBP3-216ENST00000610401 IGKV2-28A0A075B6P5 120 aa14.4□□□□□ -0.1
SSBP3-216ENST00000610401 NCR3O14931 201 aa14.4□□□□□ -0.1
SSBP3-216ENST00000610401 DEFB4AO15263 64 aa14.4□□□□□ -0.1
SSBP3-216ENST00000610401 IGKV2D-28P01615 120 aa14.4□□□□□ -0.1
SSBP3-216ENST00000610401 FASNP49327 2511 aaKnown RBP14.4□□□□□ -0.1
SSBP3-216ENST00000610401 WFDC11Q8NEX6 87 aa14.4□□□□□ -0.1
SSBP3-216ENST00000610401 IGLV10-54A0A075B6I4 117 aa14.39□□□□□ -0.11
SSBP3-216ENST00000610401 BBC3Q96PG8 261 aaPredicted RBP14.39□□□□□ -0.11
SSBP3-216ENST00000610401 RNF152Q8N8N0 203 aa14.38□□□□□ -0.11
SSBP3-216ENST00000610401 CCL18P55774 89 aa14.38□□□□□ -0.11
SSBP3-216ENST00000610401 C6orf226Q5I0X4 101 aa14.38□□□□□ -0.11
SSBP3-216ENST00000610401 MALP21145 153 aa14.38□□□□□ -0.11
SSBP3-216ENST00000610401 C22orf24Q9Y442 160 aa14.38□□□□□ -0.11
SSBP3-216ENST00000610401 UBR5O95071 2799 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-216ENST00000610401 A0A087WVE0 104 aa14.37□□□□□ -0.11
SSBP3-216ENST00000610401 DNAJC9-AS1A6NH13 148 aa14.37□□□□□ -0.11
SSBP3-216ENST00000610401 Q6Q795 121 aa14.37□□□□□ -0.11
SSBP3-216ENST00000610401 A8MTW9 85 aa14.36□□□□□ -0.11
SSBP3-216ENST00000610401 C9orf153Q5TBE3 101 aa14.36□□□□□ -0.11
SSBP3-216ENST00000610401 HECTD1Q9ULT8 2610 aa14.36□□□□□ -0.11
SSBP3-216ENST00000610401 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
SSBP3-216ENST00000610401 Q8N3U1 123 aa14.34□□□□□ -0.11
SSBP3-216ENST00000610401 DEFB113Q30KQ7 82 aa14.33□□□□□ -0.12
SSBP3-216ENST00000610401 FAM240AA0A1B0GVK7 77 aa14.33□□□□□ -0.12
SSBP3-216ENST00000610401 TENM4Q6N022 2769 aa14.33□□□□□ -0.12
SSBP3-216ENST00000610401 TRAV13-2A0A0B4J235 113 aa14.32□□□□□ -0.12
SSBP3-216ENST00000610401 TRBV10-1A0A0K0K1A3 114 aa14.32□□□□□ -0.12
SSBP3-216ENST00000610401 FSHBP01225 129 aa14.32□□□□□ -0.12
SSBP3-216ENST00000610401 MRPL23Q16540 153 aaKnown RBP14.32□□□□□ -0.12
SSBP3-216ENST00000610401 LINC00526Q96FQ7 95 aa14.32□□□□□ -0.12
SSBP3-216ENST00000610401 WFDC9Q8NEX5 89 aa14.32□□□□□ -0.12
SSBP3-216ENST00000610401 ATRQ13535 2644 aa14.31□□□□□ -0.12
SSBP3-216ENST00000610401 C9orf116Q5BN46 136 aaPredicted RBP14.31□□□□□ -0.12
SSBP3-216ENST00000610401 DEFB121Q5J5C9 76 aa14.31□□□□□ -0.12
SSBP3-216ENST00000610401 COPS9Q8WXC6 57 aa14.31□□□□□ -0.12
SSBP3-216ENST00000610401 TRACP01848 142 aa14.31□□□□□ -0.12
SSBP3-216ENST00000610401 HELZ2Q9BYK8 2649 aaKnown RBP14.31□□□□□ -0.12
SSBP3-216ENST00000610401 LINC00643Q86TS7 51 aa14.3□□□□□ -0.12
SSBP3-216ENST00000610401 TRBV6-8A0A0A6YYG3 113 aa14.29□□□□□ -0.12
SSBP3-216ENST00000610401 TRBV7-7A0A0K0K1E9 115 aa14.29□□□□□ -0.12
SSBP3-216ENST00000610401 PLAC8L1A1L4L8 177 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms