RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	TRBV24-1	A0A075B6N3	115 aa		12.66	□□□□□ -0.38
NECAB3-222	ENST00000607805	RPL39	P62891	51 aa	Known RBP	12.66	□□□□□ -0.38
NECAB3-222	ENST00000607805	FAM104B	Q5XKR9	115 aa		12.66	□□□□□ -0.38
NECAB3-222	ENST00000607805	ORAOV1	Q8WV07	137 aa		12.66	□□□□□ -0.38
NECAB3-222	ENST00000607805	TMEM18	Q96B42	140 aa		12.66	□□□□□ -0.38
NECAB3-222	ENST00000607805	IGLV1-50	A0A075B6I6	118 aa		12.65	□□□□□ -0.38
NECAB3-222	ENST00000607805		A0A087WZ39	114 aa		12.65	□□□□□ -0.38
NECAB3-222	ENST00000607805	C20orf78	Q9BR46	151 aa		12.65	□□□□□ -0.38
NECAB3-222	ENST00000607805	EIF5A2	Q9GZV4	153 aa	Known RBP	12.65	□□□□□ -0.38
NECAB3-222	ENST00000607805	ZNF727	A8MUV8	499 aa		12.64	□□□□□ -0.39
NECAB3-222	ENST00000607805	NDUFA1	O15239	70 aa		12.64	□□□□□ -0.39
NECAB3-222	ENST00000607805	UNQ6190/PRO20217	Q6UXQ8	127 aa		12.64	□□□□□ -0.39
NECAB3-222	ENST00000607805	C6orf48	Q9UBA6	75 aa		12.64	□□□□□ -0.39
NECAB3-222	ENST00000607805	LINC00862	A6NCI5	91 aa		12.63	□□□□□ -0.39
NECAB3-222	ENST00000607805	SRP19	P09132	144 aa	Known RBP	12.63	□□□□□ -0.39
NECAB3-222	ENST00000607805	TMEM241	Q24JQ0	296 aa		12.63	□□□□□ -0.39
NECAB3-222	ENST00000607805	MRPS36	P82909	103 aa	Known RBP	12.62	□□□□□ -0.39
NECAB3-222	ENST00000607805	KIAA0087	Q14695	138 aa		12.62	□□□□□ -0.39
NECAB3-222	ENST00000607805	NAT8B	Q9UHF3	227 aa		12.62	□□□□□ -0.39
NECAB3-222	ENST00000607805	SMDT1	Q9H4I9	107 aa		12.61	□□□□□ -0.39
NECAB3-222	ENST00000607805	SPANXA1	Q9NS26	97 aa		12.61	□□□□□ -0.39
NECAB3-222	ENST00000607805	TCAP	O15273	167 aa		12.6	□□□□□ -0.39
NECAB3-222	ENST00000607805	FAM74A3	Q4VXF1	159 aa		12.6	□□□□□ -0.39
NECAB3-222	ENST00000607805	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	12.6	□□□□□ -0.39
NECAB3-222	ENST00000607805	SMIM2	Q9BVW6	85 aa		12.59	□□□□□ -0.39
NECAB3-222	ENST00000607805	SMIM27	A0A1W2PRY6	76 aa		12.58	□□□□□ -0.4
NECAB3-222	ENST00000607805	TNFRSF6B	O95407	300 aa		12.58	□□□□□ -0.4
NECAB3-222	ENST00000607805	GAGE2E	Q4V326	116 aa		12.58	□□□□□ -0.4
NECAB3-222	ENST00000607805	GAGE2D	Q9UEU5	116 aa		12.58	□□□□□ -0.4
NECAB3-222	ENST00000607805	CKS2	P33552	79 aa		12.57	□□□□□ -0.4
NECAB3-222	ENST00000607805	RPL23	P62829	140 aa	Known RBP	12.57	□□□□□ -0.4
NECAB3-222	ENST00000607805	HBB	P68871	147 aa		12.56	□□□□□ -0.4
NECAB3-222	ENST00000607805	IFITM10	A6NMD0	228 aa		12.55	□□□□□ -0.4
NECAB3-222	ENST00000607805		M0QXV9	152 aa		12.55	□□□□□ -0.4
NECAB3-222	ENST00000607805		A0A1B0GW15	77 aa		12.54	□□□□□ -0.4
NECAB3-222	ENST00000607805	C9orf129	Q5T035	196 aa	Known RBP	12.54	□□□□□ -0.4
NECAB3-222	ENST00000607805	TRBV30	A0A0K0K1B3	111 aa		12.53	□□□□□ -0.4
NECAB3-222	ENST00000607805		D6R8Y8	96 aa		12.53	□□□□□ -0.4
NECAB3-222	ENST00000607805	NPY	P01303	97 aa		12.53	□□□□□ -0.4
NECAB3-222	ENST00000607805	RPL13A	P40429	203 aa	Known RBP	12.53	□□□□□ -0.4
NECAB3-222	ENST00000607805	LINC00242	Q5T6M2	205 aa		12.53	□□□□□ -0.4
NECAB3-222	ENST00000607805	TGIF2-C20orf24	A0A0A6YYL0	155 aa		12.52	□□□□□ -0.41
NECAB3-222	ENST00000607805	NDUFC2-KCTD14	E9PQ53	114 aa		12.52	□□□□□ -0.41
NECAB3-222	ENST00000607805	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.52	□□□□□ -0.41
NECAB3-222	ENST00000607805	PYGO1	Q9Y3Y4	419 aa		12.52	□□□□□ -0.41
NECAB3-222	ENST00000607805	FAT4	Q6V0I7	4981 aa		12.52	□□□□□ -0.41
NECAB3-222	ENST00000607805	UBE2B	P63146	152 aa		12.51	□□□□□ -0.41
NECAB3-222	ENST00000607805	PRR4	Q16378	134 aa		12.51	□□□□□ -0.41
NECAB3-222	ENST00000607805	C2orf82	Q6UX34	121 aa		12.51	□□□□□ -0.41
NECAB3-222	ENST00000607805		A0A1B0GXF2	115 aa		12.5	□□□□□ -0.41
NECAB3-222	ENST00000607805	IGLV4-3	A0A075B6K6	122 aa		12.49	□□□□□ -0.41
NECAB3-222	ENST00000607805		C9JQL5	133 aa		12.49	□□□□□ -0.41
NECAB3-222	ENST00000607805	UBE2D1	P51668	147 aa		12.49	□□□□□ -0.41
NECAB3-222	ENST00000607805	ADIRF	Q15847	76 aa		12.49	□□□□□ -0.41
NECAB3-222	ENST00000607805	NAT8	Q9UHE5	227 aa		12.49	□□□□□ -0.41
NECAB3-222	ENST00000607805	PEA15	Q15121	130 aa		12.48	□□□□□ -0.41
NECAB3-222	ENST00000607805	LINC01561	Q8N1V8	128 aa		12.48	□□□□□ -0.41
NECAB3-222	ENST00000607805	ZNF861P	O60384	105 aa		12.47	□□□□□ -0.41
NECAB3-222	ENST00000607805	PPBP	P02775	128 aa		12.47	□□□□□ -0.41
NECAB3-222	ENST00000607805		F8W036	122 aa		12.46	□□□□□ -0.41
NECAB3-222	ENST00000607805	IFI27	P40305	119 aa	Predicted RBP	12.46	□□□□□ -0.41
NECAB3-222	ENST00000607805	MRPL54	Q6P161	138 aa	Known RBP	12.46	□□□□□ -0.41
NECAB3-222	ENST00000607805	S100A8	P05109	93 aa		12.45	□□□□□ -0.42
NECAB3-222	ENST00000607805	SRSF3	P84103	164 aa	Known RBP	12.45	□□□□□ -0.42
NECAB3-222	ENST00000607805	TMEM141	Q96I45	108 aa		12.45	□□□□□ -0.42
NECAB3-222	ENST00000607805	PACRG	Q96M98	296 aa	Predicted RBP	12.44	□□□□□ -0.42
NECAB3-222	ENST00000607805	PRSS47	A8MTI9	375 aa		12.43	□□□□□ -0.42
NECAB3-222	ENST00000607805	LINC00173	Q6ZV60	143 aa		12.43	□□□□□ -0.42
NECAB3-222	ENST00000607805	RAB5A	P20339	215 aa		12.42	□□□□□ -0.42
NECAB3-222	ENST00000607805	ORMDL3	Q8N138	153 aa		12.42	□□□□□ -0.42
NECAB3-222	ENST00000607805	KRTAP9-2	Q9BYQ4	174 aa		12.42	□□□□□ -0.42
NECAB3-222	ENST00000607805	NUPR1	O60356	82 aa		12.41	□□□□□ -0.42
NECAB3-222	ENST00000607805	TMEM136	Q6ZRR5	245 aa		12.41	□□□□□ -0.42
NECAB3-222	ENST00000607805	PRELID3A	Q96N28	172 aa		12.41	□□□□□ -0.42
NECAB3-222	ENST00000607805	C22orf24	Q9Y442	160 aa		12.41	□□□□□ -0.42
NECAB3-222	ENST00000607805	MUC17	Q685J3	4493 aa		12.41	□□□□□ -0.42
NECAB3-222	ENST00000607805	TEX43	Q6ZNM6	134 aa		12.4	□□□□□ -0.42
NECAB3-222	ENST00000607805	AMELX	Q99217	191 aa		12.4	□□□□□ -0.42
NECAB3-222	ENST00000607805		A0A087X002	238 aa		12.39	□□□□□ -0.43
NECAB3-222	ENST00000607805	LCE2A	Q5TA79	106 aa	Predicted RBP	12.39	□□□□□ -0.43
NECAB3-222	ENST00000607805	ZC2HC1B	Q5TFG8	222 aa		12.39	□□□□□ -0.43
NECAB3-222	ENST00000607805	FAM19A3	Q7Z5A8	133 aa		12.39	□□□□□ -0.43
NECAB3-222	ENST00000607805		A0A0U1RQV1	116 aa		12.38	□□□□□ -0.43
NECAB3-222	ENST00000607805		Q6ZN92	141 aa		12.38	□□□□□ -0.43
NECAB3-222	ENST00000607805	ATP5L2	Q7Z4Y8	100 aa		12.37	□□□□□ -0.43
NECAB3-222	ENST00000607805		Q8IZM0	81 aa		12.37	□□□□□ -0.43
NECAB3-222	ENST00000607805	LINC00469	Q8N7U9	141 aa		12.37	□□□□□ -0.43
NECAB3-222	ENST00000607805	CTDSP1	Q9GZU7	261 aa		12.37	□□□□□ -0.43
NECAB3-222	ENST00000607805	TSPAN13	O95857	204 aa		12.36	□□□□□ -0.43
NECAB3-222	ENST00000607805	XAGE1A	Q9HD64	81 aa		12.36	□□□□□ -0.43
NECAB3-222	ENST00000607805	TP73-AS1	Q9UF72	201 aa		12.36	□□□□□ -0.43
NECAB3-222	ENST00000607805	LBH	Q53QV2	105 aa	Predicted RBP	12.35	□□□□□ -0.43
NECAB3-222	ENST00000607805	C2orf66	Q6UXQ4	117 aa		12.35	□□□□□ -0.43
NECAB3-222	ENST00000607805	C2orf88	Q9BSF0	95 aa		12.35	□□□□□ -0.43
NECAB3-222	ENST00000607805	LAMTOR2	Q9Y2Q5	125 aa		12.35	□□□□□ -0.43
NECAB3-222	ENST00000607805	PRSS2	P07478	247 aa		12.34	□□□□□ -0.43
NECAB3-222	ENST00000607805	NPS	P0C0P6	89 aa		12.34	□□□□□ -0.43
NECAB3-222	ENST00000607805	RAB14	P61106	215 aa		12.34	□□□□□ -0.43
NECAB3-222	ENST00000607805	TOMM7	Q9P0U1	55 aa		12.34	□□□□□ -0.43
NECAB3-222	ENST00000607805	CYSLTR1	Q9Y271	337 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms