RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
LINC00240-203ENST00000606878 TMEM141Q96I45 108 aa10.6□□□□□ -0.71
LINC00240-203ENST00000606878 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 SNAPINO95295 136 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 MT-ND6P03923 174 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 SYCNQ0VAF6 134 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 FABP9Q0Z7S8 132 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 SVBPQ8N300 66 aa10.59□□□□□ -0.71
LINC00240-203ENST00000606878 PANO1I0J062 215 aa10.58□□□□□ -0.72
LINC00240-203ENST00000606878 CIRBPQ14011 172 aaKnown RBP10.58□□□□□ -0.72
LINC00240-203ENST00000606878 Q6ZN92 141 aa10.58□□□□□ -0.72
LINC00240-203ENST00000606878 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
LINC00240-203ENST00000606878 ALKBH7Q9BT30 221 aaPredicted RBP10.58□□□□□ -0.72
LINC00240-203ENST00000606878 VCX2Q9H322 139 aa10.58□□□□□ -0.72
LINC00240-203ENST00000606878 PKIGQ9Y2B9 76 aa10.58□□□□□ -0.72
LINC00240-203ENST00000606878 FLG2Q5D862 2391 aaPredicted RBP10.57□□□□□ -0.72
LINC00240-203ENST00000606878 IGLV4-69A0A075B6H9 119 aa10.57□□□□□ -0.72
LINC00240-203ENST00000606878 IGHV3OR16-9A0A0B4J2B5 98 aa10.57□□□□□ -0.72
LINC00240-203ENST00000606878 NPSP0C0P6 89 aa10.57□□□□□ -0.72
LINC00240-203ENST00000606878 TEX43Q6ZNM6 134 aa10.57□□□□□ -0.72
LINC00240-203ENST00000606878 C2orf88Q9BSF0 95 aa10.57□□□□□ -0.72
LINC00240-203ENST00000606878 MRPL18Q9H0U6 180 aaKnown RBP10.57□□□□□ -0.72
LINC00240-203ENST00000606878 CHTF8P0CG12 524 aa10.56□□□□□ -0.72
LINC00240-203ENST00000606878 A0A087WYN8 130 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 IGIPA6NJ69 53 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 PAPPA-AS1Q5QFB9 102 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 LINC00242Q5T6M2 205 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 SPACA4Q8TDM5 124 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
LINC00240-203ENST00000606878 IGKV2-24A0A0C4DH68 120 aa10.54□□□□□ -0.72
LINC00240-203ENST00000606878 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
LINC00240-203ENST00000606878 OR10D4PQ8NGN7 298 aa10.54□□□□□ -0.72
LINC00240-203ENST00000606878 LINC00474Q9P2X8 69 aa10.54□□□□□ -0.72
LINC00240-203ENST00000606878 TRAPPC1Q9Y5R8 145 aa10.54□□□□□ -0.72
LINC00240-203ENST00000606878 SPAG11BQ08648 103 aa10.53□□□□□ -0.72
LINC00240-203ENST00000606878 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
LINC00240-203ENST00000606878 TOMM6Q96B49 74 aa10.53□□□□□ -0.72
LINC00240-203ENST00000606878 AMELXQ99217 191 aa10.53□□□□□ -0.72
LINC00240-203ENST00000606878 A0A087WZ39 114 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 LINC01549A6NIU2 74 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 F8WDY8 70 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 UBE2D1P51668 147 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 Q6ZRU5 148 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 FA2HQ7L5A8 372 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 SCGB3A1Q96QR1 104 aa10.52□□□□□ -0.73
LINC00240-203ENST00000606878 LINC01546A6NGU7 62 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 RPL37AP61513 92 aaKnown RBP10.51□□□□□ -0.73
LINC00240-203ENST00000606878 ZC2HC1BQ5TFG8 222 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 ERASQ7Z444 233 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 TIMM17AQ99595 171 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 SMCO4Q9NRQ5 59 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 PLAC8Q9NZF1 115 aa10.51□□□□□ -0.73
LINC00240-203ENST00000606878 A0A096LNI7 61 aa10.5□□□□□ -0.73
LINC00240-203ENST00000606878 LINC00173Q6ZV60 143 aa10.5□□□□□ -0.73
LINC00240-203ENST00000606878 VPS13BQ7Z7G8 4022 aa10.5□□□□□ -0.73
LINC00240-203ENST00000606878 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
LINC00240-203ENST00000606878 SEC11AP67812 179 aa10.49□□□□□ -0.73
LINC00240-203ENST00000606878 RNF151Q2KHN1 245 aa10.49□□□□□ -0.73
LINC00240-203ENST00000606878 LINC01561Q8N1V8 128 aa10.49□□□□□ -0.73
LINC00240-203ENST00000606878 STPG4Q8N801 248 aa10.49□□□□□ -0.73
LINC00240-203ENST00000606878 GAGE2BQ13066 116 aa10.48□□□□□ -0.73
LINC00240-203ENST00000606878 DMBT1Q9UGM3 2413 aaPredicted RBP10.47□□□□□ -0.73
LINC00240-203ENST00000606878 NDUFA1O15239 70 aa10.47□□□□□ -0.73
LINC00240-203ENST00000606878 KRTAP10-4P60372 401 aaPredicted RBP10.47□□□□□ -0.73
LINC00240-203ENST00000606878 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
LINC00240-203ENST00000606878 MRPL35Q9NZE8 188 aaKnown RBP10.47□□□□□ -0.73
LINC00240-203ENST00000606878 PTTG1IPP53801 180 aa10.46□□□□□ -0.73
LINC00240-203ENST00000606878 HERVK_113P63121 156 aa10.46□□□□□ -0.73
LINC00240-203ENST00000606878 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
LINC00240-203ENST00000606878 GEMIN7Q9H840 131 aaKnown RBP10.46□□□□□ -0.73
LINC00240-203ENST00000606878 LINC00614P0C842 121 aa10.45□□□□□ -0.74
LINC00240-203ENST00000606878 UNQ6190/PRO20217Q6UXQ8 127 aa10.45□□□□□ -0.74
LINC00240-203ENST00000606878 A0A0J9YXV3 536 aa10.44□□□□□ -0.74
LINC00240-203ENST00000606878 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.44□□□□□ -0.74
LINC00240-203ENST00000606878 RAB5BP61020 215 aa10.44□□□□□ -0.74
LINC00240-203ENST00000606878 KIAA0087Q14695 138 aa10.44□□□□□ -0.74
LINC00240-203ENST00000606878 C18orf32Q8TCD1 76 aa10.44□□□□□ -0.74
LINC00240-203ENST00000606878 PRSS2P07478 247 aa10.43□□□□□ -0.74
LINC00240-203ENST00000606878 C10orf25Q5T742 122 aa10.43□□□□□ -0.74
LINC00240-203ENST00000606878 SLC7A5P1Q8MH63 180 aa10.43□□□□□ -0.74
LINC00240-203ENST00000606878 CST9LQ9H4G1 147 aa10.43□□□□□ -0.74
LINC00240-203ENST00000606878 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
LINC00240-203ENST00000606878 C6orf226Q5I0X4 101 aa10.42□□□□□ -0.74
LINC00240-203ENST00000606878 PACRGQ96M98 296 aaPredicted RBP10.42□□□□□ -0.74
LINC00240-203ENST00000606878 YPEL4Q96NS1 127 aa10.42□□□□□ -0.74
LINC00240-203ENST00000606878 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
LINC00240-203ENST00000606878 PMVKQ15126 192 aa10.41□□□□□ -0.74
LINC00240-203ENST00000606878 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
LINC00240-203ENST00000606878 TINCRA0A1B0GVN0 87 aa10.4□□□□□ -0.74
LINC00240-203ENST00000606878 CKS1BP61024 79 aa10.4□□□□□ -0.74
LINC00240-203ENST00000606878 C2orf82Q6UX34 121 aa10.4□□□□□ -0.74
LINC00240-203ENST00000606878 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
LINC00240-203ENST00000606878 C6orf48Q9UBA6 75 aa10.4□□□□□ -0.74
LINC00240-203ENST00000606878 TRBV30A0A0K0K1B3 111 aa10.39□□□□□ -0.75
LINC00240-203ENST00000606878 J3QL48 77 aa10.39□□□□□ -0.75
LINC00240-203ENST00000606878 HBDP02042 147 aa10.39□□□□□ -0.75
LINC00240-203ENST00000606878 TLX1NBP0CAT3 122 aa10.39□□□□□ -0.75
LINC00240-203ENST00000606878 LINC00469Q8N7U9 141 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms