RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 HIST3H2BBQ8N257 126 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 CST9LQ9H4G1 147 aa5.1□□□□□ -1.59
MSH6-211ENST00000606499 A0A0J9YXV3 536 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 PRSS1P07477 247 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 SNRPEP62304 92 aaKnown RBP5.09□□□□□ -1.59
MSH6-211ENST00000606499 COX6A2Q02221 97 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 TNP2Q05952 138 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 FOXI1Q12951 378 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 WFDC2Q14508 124 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 LINC00242Q5T6M2 205 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 TM2D2Q9BX73 214 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 HSPB8Q9UJY1 196 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 COX11Q9Y6N1 276 aa5.09□□□□□ -1.59
MSH6-211ENST00000606499 CD164L2Q6UWJ8 174 aa5.08□□□□□ -1.6
MSH6-211ENST00000606499 HIST1H2BLQ99880 126 aa5.08□□□□□ -1.6
MSH6-211ENST00000606499 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 IGLV4-69A0A075B6H9 119 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 TRAV12-1A0A0B4J245 112 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 IGHV3OR16-9A0A0B4J2B5 98 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 LRCOL1A6NCL2 159 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 C5orf52A6NGY3 159 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 COX7A2LO14548 114 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 ODF1Q14990 250 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 FAM19A3Q7Z5A8 133 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 SPATA12Q7Z6I5 190 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 C5orf38Q86SI9 138 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 PACRGQ96M98 296 aaPredicted RBP5.07□□□□□ -1.6
MSH6-211ENST00000606499 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 CHAC1Q9BUX1 264 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 MAP1LC3CQ9BXW4 147 aa5.07□□□□□ -1.6
MSH6-211ENST00000606499 MRPL35Q9NZE8 188 aaKnown RBP5.07□□□□□ -1.6
MSH6-211ENST00000606499 CHTOPQ9Y3Y2 248 aaKnown RBP5.07□□□□□ -1.6
MSH6-211ENST00000606499 A0A087WTM6 91 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 TINCRA0A1B0GVN0 87 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 C11orf86A6NJI1 115 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 USP17L23D6RBM5 183 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 SYS1-DBNDD2H3BUS1 97 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 C3orf79P0CE67 100 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 IGLC3P0DOY3 106 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 S100A2P29034 98 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 KRTDAPP60985 99 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 HERVK_113P63121 156 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 LCE2CQ5TA81 110 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 LINC00469Q8N7U9 141 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 C15orf56Q8N910 161 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 GEMIN7Q9H840 131 aaKnown RBP5.06□□□□□ -1.6
MSH6-211ENST00000606499 CDKN2A-AS1Q9UH64 79 aa5.06□□□□□ -1.6
MSH6-211ENST00000606499 F8VRH5 84 aa5.05□□□□□ -1.6
MSH6-211ENST00000606499 ZNF22P17026 224 aaPredicted RBP5.05□□□□□ -1.6
MSH6-211ENST00000606499 MALP21145 153 aa5.05□□□□□ -1.6
MSH6-211ENST00000606499 SEC11AP67812 179 aa5.05□□□□□ -1.6
MSH6-211ENST00000606499 HIGD2BQ4VC39 106 aa5.05□□□□□ -1.6
MSH6-211ENST00000606499 LINC00336Q6ZUF6 198 aa5.05□□□□□ -1.6
MSH6-211ENST00000606499 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
MSH6-211ENST00000606499 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.04□□□□□ -1.6
MSH6-211ENST00000606499 IGLV5-45A0A087WSX0 123 aa5.04□□□□□ -1.6
MSH6-211ENST00000606499 A0A087WZ39 114 aa5.04□□□□□ -1.6
MSH6-211ENST00000606499 FUSP35637 526 aaKnown RBP eCLIP5.04□□□□□ -1.6
MSH6-211ENST00000606499 LCE2AQ5TA79 106 aaPredicted RBP5.04□□□□□ -1.6
MSH6-211ENST00000606499 Q8N814 137 aa5.04□□□□□ -1.6
MSH6-211ENST00000606499 LINC00526Q96FQ7 95 aa5.04□□□□□ -1.6
MSH6-211ENST00000606499 IGHV3-64A0A075B6Q5 118 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 GVQW2A0A096LPI5 108 aaPredicted RBP5.03□□□□□ -1.6
MSH6-211ENST00000606499 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 hDV102S1A0JD36 115 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 SMIM1B2RUZ4 78 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 DPM2O94777 84 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 SPINK8P0C7L1 97 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 PLNP26678 52 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 TMEM170BQ5T4T1 132 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 LINC01545Q5VT33 79 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 PET117Q6UWS5 81 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 ORAOV1Q8WV07 137 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
MSH6-211ENST00000606499 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 EREGO14944 169 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 APOMO95445 188 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 IGKCP01834 107 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 KRTAP10-2P60368 255 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 SPAG11BQ08648 103 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 CFAP161Q6P656 301 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 OR10D4PQ8NGN7 298 aa5.02□□□□□ -1.61
MSH6-211ENST00000606499 TMEM223A0PJW6 202 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 H3BRM9 83 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 C14orf177Q52M58 125 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 ATOH7Q8N100 152 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 LINC01561Q8N1V8 128 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 NTN5Q8WTR8 489 aaPredicted RBP5.01□□□□□ -1.61
MSH6-211ENST00000606499 TOMM7Q9P0U1 55 aa5.01□□□□□ -1.61
MSH6-211ENST00000606499 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
MSH6-211ENST00000606499 C20orf202A1L168 122 aa5□□□□□ -1.61
MSH6-211ENST00000606499 ZNF561-AS1K7EIQ3 104 aa5□□□□□ -1.61
MSH6-211ENST00000606499 SLPIP03973 132 aa5□□□□□ -1.61
MSH6-211ENST00000606499 KIAA0087Q14695 138 aa5□□□□□ -1.61
MSH6-211ENST00000606499 LINC01620Q4KN68 170 aa5□□□□□ -1.61
MSH6-211ENST00000606499 IGLV5-52A0A0A0MRZ9 124 aa4.99□□□□□ -1.61
MSH6-211ENST00000606499 PRSS2P07478 247 aa4.99□□□□□ -1.61
MSH6-211ENST00000606499 CNBPP62633 177 aaKnown RBP4.99□□□□□ -1.61
MSH6-211ENST00000606499 C2orf82Q6UX34 121 aa4.99□□□□□ -1.61
MSH6-211ENST00000606499 Q8IZM0 81 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms