RNA–Protein interactions for RNA: ENST00000604740.5

LAMA4-222, Transcript of laminin subunit alpha 4, human

TSL 2

Gene LAMA4, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMA4-222	ENST00000604740	SPANXN1	Q5VSR9	72 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	ENHO	Q6UWT2	76 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	SDIM1	Q6ZPB5	146 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740		Q6ZRU5	148 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	BAGE2	Q86Y30	109 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	MTURN	Q8N3F0	131 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	C15orf54	Q8N8G6	183 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	PGLYRP4	Q96LB8	373 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	AP1S3	Q96PC3	154 aa		1.72	□□□□□ -2.13
LAMA4-222	ENST00000604740	IGHV3-64	A0A075B6Q5	118 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	TRAV1-1	A0A0B4J248	108 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	HMSD	A8MTL9	139 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	HSBP1L1	C9JCN9	74 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	TRGC1	P0CF51	173 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	RAB5C	P51148	216 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	RBX1	P62877	108 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	HAMP	P81172	84 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	REG3A	Q06141	175 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	MPV17L2	Q567V2	206 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740		Q5BKY6	102 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	EIF5AL1	Q6IS14	154 aa	Known RBP	1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	KRTAP26-1	Q6PEX3	210 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	RASL11A	Q6T310	242 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	TEX261	Q6UWH6	196 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	KCNRG	Q8N5I3	272 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	LINC00469	Q8N7U9	141 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	OR10AG1	Q8NH19	301 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	SFT2D1	Q8WV19	159 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	TMEM243	Q9BU79	118 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	DERL1	Q9BUN8	251 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	MANBAL	Q9NQG1	85 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	NIT2	Q9NQR4	276 aa		1.71	□□□□□ -2.14
LAMA4-222	ENST00000604740	DNAH8	Q96JB1	4490 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	IGLV10-54	A0A075B6I4	117 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	TMSB15B	A0A087X1C1	80 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	KANTR	A0A1W2PQU2	76 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740		M0QY20	66 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	UBE2L6	O14933	153 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	CCL25	O15444	150 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	ARPC5	O15511	151 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	PDE6D	O43924	150 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	NCR2	O95944	276 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	IFNA1	P01562	189 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	HLA-DQA1	P01909	254 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	IGLC6	P0CF74	106 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	RPL35	P42766	123 aa	Known RBP	1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	CCL20	P78556	96 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	COTL1	Q14019	142 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	RGS21	Q2M5E4	152 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	LINC01620	Q4KN68	170 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	NTM-AS1	Q6ZSK4	140 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	SMIM15	Q7Z3B0	74 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	LINC00269	Q8N2A0	174 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	C9orf62	Q8N4C0	152 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	FER1L6-AS1	Q8NA97	138 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	FAM213B	Q8TBF2	198 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	DPH3	Q96FX2	82 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	CNFN	Q9BYD5	112 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	DPH3P1	Q9H4G8	78 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	PLAC8	Q9NZF1	115 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	LINC00474	Q9P2X8	69 aa		1.7	□□□□□ -2.14
LAMA4-222	ENST00000604740	C19orf71	A6NCJ1	209 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740		G3V3Q6	166 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	NDUFS6	O75380	124 aa	Known RBP	1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	S100A6	P06703	90 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	ZNF25	P17030	456 aa	Predicted RBP	1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	NTF3	P20783	257 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	GNG4	P50150	75 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	SULT1A2	P50226	295 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	MEF2B	Q02080	365 aa	Predicted RBP	1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	SMAGP	Q0VAQ4	97 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	C5orf47	Q569G3	176 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	CENPW	Q5EE01	88 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	OR2D3	Q8NGH3	330 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	SPACA4	Q8TDM5	124 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	BTF3L4	Q96K17	158 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	KRTAP4-1	Q9BYQ7	146 aa		1.69	□□□□□ -2.14
LAMA4-222	ENST00000604740	GVQW2	A0A096LPI5	108 aa	Predicted RBP	1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	TRBV6-5	A0A0K0K1A5	114 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740		A8MWL6	223 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	TMEM250	H0YL14	139 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	PPP1R17	O96001	155 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	MGP	P08493	103 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	MT1HL1	P0DM35	61 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	NKX2-5	P52952	324 aa	Predicted RBP	1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	FOXA3	P55318	350 aa	Predicted RBP	1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	DEFB116	Q30KQ4	102 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	AMMECR1L	Q6DCA0	310 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	CLPSL2	Q6UWE3	100 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	SPINK6	Q6UWN8	80 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	LYZL1	Q6UWQ5	148 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	MRPL52	Q86TS9	123 aa	Known RBP	1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	OR5A1	Q8NGJ0	315 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	ISOC2	Q96AB3	205 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	LINC01600	Q96MT4	127 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	MED9	Q9NWA0	146 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	GNG13	Q9P2W3	67 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	HMCN2	Q8NDA2	5059 aa		1.68	□□□□□ -2.14
LAMA4-222	ENST00000604740	LRP1	Q07954	4544 aa	Known RBP	1.68	□□□□□ -2.14

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