RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 A0A1B0GWB2 263 aa10.55□□□□□ -0.72
CCDC12-211ENST00000604367 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
CCDC12-211ENST00000604367 CELA1Q9UNI1 258 aa10.55□□□□□ -0.72
CCDC12-211ENST00000604367 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
CCDC12-211ENST00000604367 HERV-K104P63124 156 aa10.54□□□□□ -0.72
CCDC12-211ENST00000604367 Q8NAQ8 132 aa10.54□□□□□ -0.72
CCDC12-211ENST00000604367 PKD1L1Q8TDX9 2849 aa10.54□□□□□ -0.72
CCDC12-211ENST00000604367 DAD1P61803 113 aa10.54□□□□□ -0.72
CCDC12-211ENST00000604367 H7C423 109 aa10.53□□□□□ -0.72
CCDC12-211ENST00000604367 PAX4O43316 350 aa10.53□□□□□ -0.72
CCDC12-211ENST00000604367 KRTAP10-11P60412 298 aa10.53□□□□□ -0.72
CCDC12-211ENST00000604367 RNF183Q96D59 192 aa10.53□□□□□ -0.72
CCDC12-211ENST00000604367 MIFP14174 115 aa10.52□□□□□ -0.73
CCDC12-211ENST00000604367 ZFAND6Q6FIF0 208 aa10.52□□□□□ -0.73
CCDC12-211ENST00000604367 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
CCDC12-211ENST00000604367 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.73
CCDC12-211ENST00000604367 TMEM262E9PQX1 116 aa10.51□□□□□ -0.73
CCDC12-211ENST00000604367 PRSS2P07478 247 aa10.51□□□□□ -0.73
CCDC12-211ENST00000604367 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
CCDC12-211ENST00000604367 SMIM1B2RUZ4 78 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 CFC1BP0CG36 223 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 CFC1P0CG37 223 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 HTN3P15516 51 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 ADAMTSL4-AS1Q5T5F5 129 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 LITAFQ99732 161 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 ANK2Q01484 3957 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 PRIMA1Q86XR5 153 aa10.5□□□□□ -0.73
CCDC12-211ENST00000604367 NPC2P61916 151 aa10.49□□□□□ -0.73
CCDC12-211ENST00000604367 ZNF625Q96I27 306 aaPredicted RBP10.49□□□□□ -0.73
CCDC12-211ENST00000604367 F5H768 121 aa10.49□□□□□ -0.73
CCDC12-211ENST00000604367 SPART-AS1P0CW21 52 aa10.49□□□□□ -0.73
CCDC12-211ENST00000604367 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
CCDC12-211ENST00000604367 ATP5G1P05496 136 aa10.48□□□□□ -0.73
CCDC12-211ENST00000604367 Q9H8V8 135 aa10.48□□□□□ -0.73
CCDC12-211ENST00000604367 TSPAN13O95857 204 aa10.48□□□□□ -0.73
CCDC12-211ENST00000604367 RETNQ9HD89 108 aa10.48□□□□□ -0.73
CCDC12-211ENST00000604367 NDUFA1O15239 70 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 RPL24P83731 157 aaKnown RBP10.47□□□□□ -0.73
CCDC12-211ENST00000604367 DAND5Q8N907 189 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 CMYA5Q8N3K9 4069 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 G3V4G9 280 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 SCGB1A1P11684 91 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 COL6A5A8TX70 2615 aa10.47□□□□□ -0.73
CCDC12-211ENST00000604367 A0A0U1RRA0 63 aa10.46□□□□□ -0.73
CCDC12-211ENST00000604367 LOC107984156A0A0G2JMH3 177 aa10.46□□□□□ -0.74
CCDC12-211ENST00000604367 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.74
CCDC12-211ENST00000604367 ARL17AQ8IVW1 177 aa10.46□□□□□ -0.74
CCDC12-211ENST00000604367 EIF4EBP3O60516 100 aaPredicted RBP10.45□□□□□ -0.74
CCDC12-211ENST00000604367 PRO1854Q9UHT4 67 aa10.45□□□□□ -0.74
CCDC12-211ENST00000604367 H3BMG7 143 aa10.45□□□□□ -0.74
CCDC12-211ENST00000604367 H7C2G1 150 aa10.44□□□□□ -0.74
CCDC12-211ENST00000604367 MIAQ16674 131 aa10.44□□□□□ -0.74
CCDC12-211ENST00000604367 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
CCDC12-211ENST00000604367 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
CCDC12-211ENST00000604367 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
CCDC12-211ENST00000604367 CKS1BP61024 79 aa10.43□□□□□ -0.74
CCDC12-211ENST00000604367 TOMM7Q9P0U1 55 aa10.43□□□□□ -0.74
CCDC12-211ENST00000604367 LINC00959A0A1B0GUT2 108 aa10.43□□□□□ -0.74
CCDC12-211ENST00000604367 C5orf38Q86SI9 138 aa10.43□□□□□ -0.74
CCDC12-211ENST00000604367 Q8N3U1 123 aa10.43□□□□□ -0.74
CCDC12-211ENST00000604367 CIRBPQ14011 172 aaKnown RBP10.42□□□□□ -0.74
CCDC12-211ENST00000604367 MTURNQ8N3F0 131 aa10.42□□□□□ -0.74
CCDC12-211ENST00000604367 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
CCDC12-211ENST00000604367 A0A1B0GUV1 79 aa10.42□□□□□ -0.74
CCDC12-211ENST00000604367 MEIG1Q5JSS6 88 aa10.42□□□□□ -0.74
CCDC12-211ENST00000604367 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
CCDC12-211ENST00000604367 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.41□□□□□ -0.74
CCDC12-211ENST00000604367 XCL1P47992 114 aa10.41□□□□□ -0.74
CCDC12-211ENST00000604367 A0A0B4J2C4 111 aa10.4□□□□□ -0.74
CCDC12-211ENST00000604367 TIMM17BO60830 172 aa10.4□□□□□ -0.74
CCDC12-211ENST00000604367 IGHV3-33P01772 117 aa10.39□□□□□ -0.75
CCDC12-211ENST00000604367 PSMB2P49721 201 aa10.39□□□□□ -0.75
CCDC12-211ENST00000604367 MRPL23Q16540 153 aaKnown RBP10.39□□□□□ -0.75
CCDC12-211ENST00000604367 COX7B2Q8TF08 81 aa10.39□□□□□ -0.75
CCDC12-211ENST00000604367 LINC00269Q8N2A0 174 aa10.39□□□□□ -0.75
CCDC12-211ENST00000604367 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
CCDC12-211ENST00000604367 Q1RN00 199 aa10.38□□□□□ -0.75
CCDC12-211ENST00000604367 A0A087WZ39 114 aa10.38□□□□□ -0.75
CCDC12-211ENST00000604367 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
CCDC12-211ENST00000604367 SS18Q15532 418 aa10.38□□□□□ -0.75
CCDC12-211ENST00000604367 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
CCDC12-211ENST00000604367 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
CCDC12-211ENST00000604367 SS18L2Q9UHA2 77 aa10.37□□□□□ -0.75
CCDC12-211ENST00000604367 LINC00308Q8TCZ7 52 aa10.37□□□□□ -0.75
CCDC12-211ENST00000604367 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
CCDC12-211ENST00000604367 WFDC2Q14508 124 aa10.36□□□□□ -0.75
CCDC12-211ENST00000604367 IGLV10-54A0A075B6I4 117 aa10.36□□□□□ -0.75
CCDC12-211ENST00000604367 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
CCDC12-211ENST00000604367 IFITM1P13164 125 aa10.36□□□□□ -0.75
CCDC12-211ENST00000604367 C11orf68Q9H3H3 251 aaKnown RBP10.36□□□□□ -0.75
CCDC12-211ENST00000604367 TEX48A0A1B0GUV7 120 aa10.35□□□□□ -0.75
CCDC12-211ENST00000604367 TCL1BO95988 128 aa10.35□□□□□ -0.75
CCDC12-211ENST00000604367 SIGMAR1Q99720 223 aa10.35□□□□□ -0.75
CCDC12-211ENST00000604367 F8W1H4 67 aa10.35□□□□□ -0.75
CCDC12-211ENST00000604367 Q6ZTC4 211 aa10.35□□□□□ -0.75
CCDC12-211ENST00000604367 REG3AQ06141 175 aa10.34□□□□□ -0.75
CCDC12-211ENST00000604367 LYRM7Q5U5X0 104 aa10.34□□□□□ -0.75
CCDC12-211ENST00000604367 SOSTDC1Q6X4U4 206 aa10.34□□□□□ -0.75
CCDC12-211ENST00000604367 LELP1Q5T871 98 aa10.33□□□□□ -0.76
CCDC12-211ENST00000604367 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms