RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SPACA4Q8TDM5 124 aa7.39□□□□□ -1.23
CCDC12-209ENST00000604164 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
CCDC12-209ENST00000604164 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
CCDC12-209ENST00000604164 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
CCDC12-209ENST00000604164 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
CCDC12-209ENST00000604164 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
CCDC12-209ENST00000604164 RPS10P5Q9NQ39 176 aa7.38□□□□□ -1.23
CCDC12-209ENST00000604164 IGLV4-69A0A075B6H9 119 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 IGLV4-3A0A075B6K6 122 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 PRSS3P2Q8NHM4 247 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 CAMK2N2Q96S95 79 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 OPRPNQ99935 248 aaPredicted RBP7.37□□□□□ -1.23
CCDC12-209ENST00000604164 VCX2Q9H322 139 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
CCDC12-209ENST00000604164 A0A087WYN8 130 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 IGHV3OR16-9A0A0B4J2B5 98 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 SPAG11BQ08648 103 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 MAJINQ3KP22 176 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 C7orf33Q8WU49 177 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 FAM104AQ969W3 186 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 PLAC8Q9NZF1 115 aa7.36□□□□□ -1.23
CCDC12-209ENST00000604164 IGKV2-24A0A0C4DH68 120 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 PANO1I0J062 215 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 SNAPINO95295 136 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 CHTF8P0CG12 524 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 SEC11AP67812 179 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 KIAA1644Q3SXP7 199 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 SVBPQ8N300 66 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 LINC00526Q96FQ7 95 aa7.35□□□□□ -1.23
CCDC12-209ENST00000604164 A0A087WZ39 114 aa7.34□□□□□ -1.23
CCDC12-209ENST00000604164 FABP9Q0Z7S8 132 aa7.34□□□□□ -1.23
CCDC12-209ENST00000604164 LINC01561Q8N1V8 128 aa7.34□□□□□ -1.23
CCDC12-209ENST00000604164 ORAOV1Q8WV07 137 aa7.34□□□□□ -1.23
CCDC12-209ENST00000604164 TIMM17AQ99595 171 aa7.34□□□□□ -1.23
CCDC12-209ENST00000604164 A0A096LNI7 61 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 NDUFA1O15239 70 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 APOC3P02656 99 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 UBE2D1P51668 147 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 LINC00242Q5T6M2 205 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 Q6ZRU5 148 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 STPG4Q8N801 248 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 TOMM6Q96B49 74 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 AMELXQ99217 191 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
CCDC12-209ENST00000604164 MRPL18Q9H0U6 180 aaKnown RBP7.33□□□□□ -1.24
CCDC12-209ENST00000604164 SMCO4Q9NRQ5 59 aa7.33□□□□□ -1.24
CCDC12-209ENST00000604164 J3QL48 77 aa7.32□□□□□ -1.24
CCDC12-209ENST00000604164 PTTG1IPP53801 180 aa7.32□□□□□ -1.24
CCDC12-209ENST00000604164 FA2HQ7L5A8 372 aa7.32□□□□□ -1.24
CCDC12-209ENST00000604164 ERASQ7Z444 233 aa7.32□□□□□ -1.24
CCDC12-209ENST00000604164 MRPL35Q9NZE8 188 aaKnown RBP7.32□□□□□ -1.24
CCDC12-209ENST00000604164 LINC01546A6NGU7 62 aa7.31□□□□□ -1.24
CCDC12-209ENST00000604164 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
CCDC12-209ENST00000604164 HERVK_113P63121 156 aa7.31□□□□□ -1.24
CCDC12-209ENST00000604164 SCGB3A1Q96QR1 104 aa7.31□□□□□ -1.24
CCDC12-209ENST00000604164 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
CCDC12-209ENST00000604164 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
CCDC12-209ENST00000604164 PRSS2P07478 247 aa7.3□□□□□ -1.24
CCDC12-209ENST00000604164 GAGE2BQ13066 116 aa7.3□□□□□ -1.24
CCDC12-209ENST00000604164 FAM19A3Q7Z5A8 133 aa7.3□□□□□ -1.24
CCDC12-209ENST00000604164 GEMIN7Q9H840 131 aaKnown RBP7.3□□□□□ -1.24
CCDC12-209ENST00000604164 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
CCDC12-209ENST00000604164 DNAH8Q96JB1 4490 aa7.3□□□□□ -1.24
CCDC12-209ENST00000604164 VPS13BQ7Z7G8 4022 aa7.29□□□□□ -1.24
CCDC12-209ENST00000604164 OXTP01178 125 aa7.29□□□□□ -1.24
CCDC12-209ENST00000604164 RPL18AQ02543 176 aaKnown RBP7.29□□□□□ -1.24
CCDC12-209ENST00000604164 LINC00173Q6ZV60 143 aa7.29□□□□□ -1.24
CCDC12-209ENST00000604164 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
CCDC12-209ENST00000604164 FAT1Q14517 4588 aa7.29□□□□□ -1.24
CCDC12-209ENST00000604164 TRBV30A0A0K0K1B3 111 aa7.28□□□□□ -1.24
CCDC12-209ENST00000604164 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.28□□□□□ -1.24
CCDC12-209ENST00000604164 RAB5BP61020 215 aa7.28□□□□□ -1.24
CCDC12-209ENST00000604164 TLX1NBP0CAT3 122 aa7.27□□□□□ -1.25
CCDC12-209ENST00000604164 CKS1BP61024 79 aa7.27□□□□□ -1.25
CCDC12-209ENST00000604164 LINC00614P0C842 121 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 KIAA0087Q14695 138 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 C6orf226Q5I0X4 101 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 ZC2HC1BQ5TFG8 222 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 Q8IZM0 81 aa7.26□□□□□ -1.25
CCDC12-209ENST00000604164 FLG2Q5D862 2391 aaPredicted RBP7.26□□□□□ -1.25
CCDC12-209ENST00000604164 TINCRA0A1B0GVN0 87 aa7.25□□□□□ -1.25
CCDC12-209ENST00000604164 PMVKQ15126 192 aa7.25□□□□□ -1.25
CCDC12-209ENST00000604164 LINC00469Q8N7U9 141 aa7.25□□□□□ -1.25
CCDC12-209ENST00000604164 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 CXCL5P42830 114 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 PRR3P79522 188 aaKnown RBP7.24□□□□□ -1.25
CCDC12-209ENST00000604164 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CCDC12-209ENST00000604164 Q6ZRP5 223 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 CST9LQ9H4G1 147 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 TOMM7Q9P0U1 55 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 C6orf48Q9UBA6 75 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 CDKN2A-AS1Q9UH64 79 aa7.24□□□□□ -1.25
CCDC12-209ENST00000604164 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
CCDC12-209ENST00000604164 H3BRM9 83 aa7.23□□□□□ -1.25
CCDC12-209ENST00000604164 HBDP02042 147 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms