RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 ZNF462Q96JM2 2506 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 LITAFQ99732 161 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 USP9XQ93008 2570 aaPredicted RBP3.38□□□□□ -1.87
LINC01109-201ENST00000603837 WT1-ASQ06250 92 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 LEAP2Q969E1 77 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 PTPN13Q12923 2485 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ARFGEF3Q5TH69 2177 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ARHGAP32A7KAX9 2087 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 DCHS2Q6V1P9 2916 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 IGHV3-21A0A0B4J1V1 117 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 DEFB109BQ30KR1 87 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 SPANXN1Q5VSR9 72 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 GGNQ86UU5 652 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ZNF575Q86XF7 245 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
LINC01109-201ENST00000603837 ABCA12Q86UK0 2595 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 A8MU10 97 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 C10orf55Q5SWW7 151 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 ENHOQ6UWT2 76 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 RPL39LQ96EH5 51 aaKnown RBP3.37□□□□□ -1.87
LINC01109-201ENST00000603837 SVEP1Q4LDE5 3571 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 IGHV3OR16-13A0A075B7E8 117 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 FDCSPQ8NFU4 85 aa3.37□□□□□ -1.87
LINC01109-201ENST00000603837 USP9YO00507 2555 aaPredicted RBP3.36□□□□□ -1.87
LINC01109-201ENST00000603837 H3BRN7 92 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 SOCS3O14543 225 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 RNASE4P34096 147 aaKnown RBP3.36□□□□□ -1.87
LINC01109-201ENST00000603837 OPRPNQ99935 248 aaPredicted RBP3.36□□□□□ -1.87
LINC01109-201ENST00000603837 NAV3Q8IVL0 2385 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 IGKV1D-17A0A075B6S4 117 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 HCP5Q6MZN7 132 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 CCDC168Q8NDH2 2452 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 WNK2Q9Y3S1 2297 aa3.36□□□□□ -1.87
LINC01109-201ENST00000603837 MGPP08493 103 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 MIFP14174 115 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 S100A4P26447 101 aaKnown RBP3.35□□□□□ -1.87
LINC01109-201ENST00000603837 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
LINC01109-201ENST00000603837 PDE6HQ13956 83 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 KMT2BQ9UMN6 2715 aaPredicted RBP3.35□□□□□ -1.87
LINC01109-201ENST00000603837 TLN2Q9Y4G6 2542 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 TRBV10-3A0A0K0K1G6 114 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 PSPHP1O15172 72 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 PRM2P04554 102 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 IGHV3-30-3P0DP02 117 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 CD28P10747 220 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
LINC01109-201ENST00000603837 NDUFA12Q9UI09 145 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 IGHV7-4-1A0A0J9YVY3 117 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 VMO1Q7Z5L0 202 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 TMEM167AQ8TBQ9 72 aa3.35□□□□□ -1.87
LINC01109-201ENST00000603837 HELZ2Q9BYK8 2649 aaKnown RBP3.34□□□□□ -1.87
LINC01109-201ENST00000603837 IGHV4-4A0A075B6R2 117 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 IGKV3D-20A0A0C4DH25 116 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 PPP1R17O96001 155 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
LINC01109-201ENST00000603837 DYNLRB2Q8TF09 96 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 DIRC1Q969H9 104 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 KRTAP9-3Q9BYQ3 159 aa3.34□□□□□ -1.87
LINC01109-201ENST00000603837 IGKV3D-15A0A087WSY6 115 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 B4DSR2 109 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 E7EQL1 145 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 C15orf32Q32M92 178 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 C18orf65Q6ZTR6 163 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 DEFB104AQ8WTQ1 72 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 TTTY12Q9BZ98 90 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 ZFP36P26651 326 aaKnown RBP3.33□□□□□ -1.88
LINC01109-201ENST00000603837 OBSCN-AS1Q96MR7 158 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 ZFHX3Q15911 3703 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 MRPL33O75394 65 aaKnown RBP3.33□□□□□ -1.88
LINC01109-201ENST00000603837 IGHV1-69P01742 117 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 Q1T7F1 81 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 FLNBO75369 2602 aaKnown RBP3.33□□□□□ -1.88
LINC01109-201ENST00000603837 NCR3O14931 201 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 APELAP0DMC3 54 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 UBL5Q9BZL1 73 aa3.33□□□□□ -1.88
LINC01109-201ENST00000603837 CSPG4Q6UVK1 2322 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 TRAV10A0A0B4J240 114 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 TRAV21A0A0B4J279 112 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 C17orf58Q2M2W7 97 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 IGFL4Q6B9Z1 124 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 ZNF625Q96I27 306 aaPredicted RBP3.32□□□□□ -1.88
LINC01109-201ENST00000603837 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.32□□□□□ -1.88
LINC01109-201ENST00000603837 DOPEY2Q9Y3R5 2298 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 ATP6V0E1O15342 81 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 IGKV1-17P01599 117 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 CMC4P56277 68 aaPredicted RBP3.32□□□□□ -1.88
LINC01109-201ENST00000603837 Q8N6K4 173 aa3.32□□□□□ -1.88
LINC01109-201ENST00000603837 TRBV7-4A0A0J9YYF1 115 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 RPL27AP46776 148 aaKnown RBP3.31□□□□□ -1.88
LINC01109-201ENST00000603837 UBE2AP49459 152 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 Q6ZRP5 223 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 SCXQ7RTU7 201 aa3.31□□□□□ -1.88
LINC01109-201ENST00000603837 Q8N1X5 172 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms