RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 FAM19A3Q7Z5A8 133 aa8.65□□□□□ -1.02
HERPUD2-207ENST00000603731 LINC00269Q8N2A0 174 aa8.65□□□□□ -1.02
HERPUD2-207ENST00000603731 LINC00959A0A1B0GUT2 108 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 CCL25O15444 150 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 REG3AQ06141 175 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 Q8N3U1 123 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 C14orf144Q96I85 54 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 KLK12Q9UKR0 248 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 APLNQ9ULZ1 77 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 LINC00588Q9Y4M8 146 aa8.64□□□□□ -1.03
HERPUD2-207ENST00000603731 TMEM223A0PJW6 202 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 E9PLD3 99 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 CRPP02741 224 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 COX6A2Q02221 97 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 UBE2DNLQ8IWF7 75 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 UQCR10Q9UDW1 63 aa8.63□□□□□ -1.03
HERPUD2-207ENST00000603731 SIVA1O15304 175 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 COX8AP10176 69 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 LINC01556Q5JQF7 62 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 CDKN2A-AS1Q9UH64 79 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 FRAS1Q86XX4 4008 aa8.62□□□□□ -1.03
HERPUD2-207ENST00000603731 IGLV5-45A0A087WSX0 123 aa8.61□□□□□ -1.03
HERPUD2-207ENST00000603731 UBE2WQ96B02 151 aa8.61□□□□□ -1.03
HERPUD2-207ENST00000603731 PLEKHB2Q96CS7 222 aa8.61□□□□□ -1.03
HERPUD2-207ENST00000603731 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 LEPROTO15243 131 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 SPINK8P0C7L1 97 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 XCL1P47992 114 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 ZFAND6Q6FIF0 208 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 UPK3BQ9BT76 320 aa8.6□□□□□ -1.03
HERPUD2-207ENST00000603731 IGHV1-58A0A0C4DH39 117 aa8.59□□□□□ -1.03
HERPUD2-207ENST00000603731 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
HERPUD2-207ENST00000603731 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
HERPUD2-207ENST00000603731 IGLV10-54A0A075B6I4 117 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 TRAV8-3A0A0A6YYJ7 113 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 J3QQQ9 107 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 DDTP30046 118 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 MIAQ16674 131 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 CD164L2Q6UWJ8 174 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 ENHOQ6UWT2 76 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 PCP2Q8IVA1 136 aa8.58□□□□□ -1.04
HERPUD2-207ENST00000603731 IGHV3OR16-9A0A0B4J2B5 98 aa8.57□□□□□ -1.04
HERPUD2-207ENST00000603731 DLEU1O43261 78 aa8.57□□□□□ -1.04
HERPUD2-207ENST00000603731 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
HERPUD2-207ENST00000603731 BOD1L2Q8IYS8 172 aa8.57□□□□□ -1.04
HERPUD2-207ENST00000603731 Q9H8V8 135 aa8.57□□□□□ -1.04
HERPUD2-207ENST00000603731 A0A087WZ39 114 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 ZNF815PA8K554 130 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 COX7A2LO14548 114 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 TTTY13Q9BZ97 58 aa8.56□□□□□ -1.04
HERPUD2-207ENST00000603731 PLECQ15149 4684 aaKnown RBP8.55□□□□□ -1.04
HERPUD2-207ENST00000603731 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
HERPUD2-207ENST00000603731 MALP21145 153 aa8.55□□□□□ -1.04
HERPUD2-207ENST00000603731 LINC01561Q8N1V8 128 aa8.55□□□□□ -1.04
HERPUD2-207ENST00000603731 MAPKAPK5-AS1Q8N8E1 139 aa8.55□□□□□ -1.04
HERPUD2-207ENST00000603731 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
HERPUD2-207ENST00000603731 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
HERPUD2-207ENST00000603731 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
HERPUD2-207ENST00000603731 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 IBA57-AS1B1ANH7 110 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 K7EP13 123 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 APOMO95445 188 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 FOXI1Q12951 378 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 SCGB1D4Q6XE38 83 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 RMI2Q96E14 147 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 Q9HAA7 133 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
HERPUD2-207ENST00000603731 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
HERPUD2-207ENST00000603731 PRSS2P07478 247 aa8.52□□□□□ -1.05
HERPUD2-207ENST00000603731 COX7B2Q8TF08 81 aa8.52□□□□□ -1.05
HERPUD2-207ENST00000603731 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
HERPUD2-207ENST00000603731 KIAA1109Q2LD37 5005 aa8.52□□□□□ -1.05
HERPUD2-207ENST00000603731 CTAG1AP78358 180 aa8.51□□□□□ -1.05
HERPUD2-207ENST00000603731 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
HERPUD2-207ENST00000603731 C2orf91Q6ZV80 131 aa8.5□□□□□ -1.05
HERPUD2-207ENST00000603731 ORAOV1Q8WV07 137 aa8.5□□□□□ -1.05
HERPUD2-207ENST00000603731 HIGD1BQ9P298 99 aa8.5□□□□□ -1.05
HERPUD2-207ENST00000603731 LINC00587B1AMM8 73 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 NDUFA1O15239 70 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 C6orf226Q5I0X4 101 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 ALMS1Q8TCU4 4167 aa8.49□□□□□ -1.05
HERPUD2-207ENST00000603731 Q8IZM0 81 aa8.48□□□□□ -1.05
HERPUD2-207ENST00000603731 A0A0J9YXY3 114 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 HERV-K104P63124 156 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 HSD52Q0P140 79 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 SFTA2Q6UW10 78 aa8.47□□□□□ -1.05
HERPUD2-207ENST00000603731 TM2D2Q9BX73 214 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms