RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	SRSF3	P84103	164 aa	Known RBP	7.15	□□□□□ -1.26
NUP62-223	ENST00000601665	LBH	Q53QV2	105 aa	Predicted RBP	7.15	□□□□□ -1.26
NUP62-223	ENST00000601665	PACRG	Q96M98	296 aa	Predicted RBP	7.15	□□□□□ -1.26
NUP62-223	ENST00000601665	KIR2DL4	Q99706	377 aa		7.15	□□□□□ -1.26
NUP62-223	ENST00000601665	TGIF2-C20orf24	A0A0A6YYL0	155 aa		7.13	□□□□□ -1.27
NUP62-223	ENST00000601665	TRBV30	A0A0K0K1B3	111 aa		7.13	□□□□□ -1.27
NUP62-223	ENST00000601665	C9orf129	Q5T035	196 aa	Known RBP	7.13	□□□□□ -1.27
NUP62-223	ENST00000601665	PPDPF	Q9H3Y8	114 aa		7.13	□□□□□ -1.27
NUP62-223	ENST00000601665	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	KANTR	A0A1W2PQU2	76 aa		7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	GATC	O43716	136 aa	Known RBP	7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	LINC00337	Q8N6G1	96 aa		7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	TIMM21	Q9BVV7	248 aa		7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	ANAPC11	Q9NYG5	84 aa		7.12	□□□□□ -1.27
NUP62-223	ENST00000601665	IFITM10	A6NMD0	228 aa		7.11	□□□□□ -1.27
NUP62-223	ENST00000601665		A8MWL6	223 aa		7.11	□□□□□ -1.27
NUP62-223	ENST00000601665	PPP1R17	O96001	155 aa		7.11	□□□□□ -1.27
NUP62-223	ENST00000601665	SUMO2	P61956	95 aa	Known RBP	7.11	□□□□□ -1.27
NUP62-223	ENST00000601665	TMEM191A	Q9H0A3	160 aa		7.11	□□□□□ -1.27
NUP62-223	ENST00000601665	C22orf24	Q9Y442	160 aa		7.11	□□□□□ -1.27
NUP62-223	ENST00000601665	IGKV2D-26	A0A0A0MRZ7	120 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	SMKR1	H3BMG3	65 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665		K7EN84	100 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	BCE1	O60756	84 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	RAB4A	P20338	218 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	HBB	P68871	147 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	ZNF345	Q14585	488 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	C2orf82	Q6UX34	121 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665	OCC1	Q8TAD7	63 aa		7.1	□□□□□ -1.27
NUP62-223	ENST00000601665		A0A1B0GUT8	65 aa		7.09	□□□□□ -1.27
NUP62-223	ENST00000601665	KRTAP13-2	Q52LG2	175 aa		7.09	□□□□□ -1.27
NUP62-223	ENST00000601665	LINC00242	Q5T6M2	205 aa		7.09	□□□□□ -1.27
NUP62-223	ENST00000601665	AMN1	Q8IY45	258 aa		7.09	□□□□□ -1.27
NUP62-223	ENST00000601665	SMLR1	H3BR10	107 aa		7.08	□□□□□ -1.28
NUP62-223	ENST00000601665	PPP1R2P9	O14990	202 aa		7.08	□□□□□ -1.28
NUP62-223	ENST00000601665	FAM229B	Q4G0N7	80 aa		7.08	□□□□□ -1.28
NUP62-223	ENST00000601665	LINC00469	Q8N7U9	141 aa		7.08	□□□□□ -1.28
NUP62-223	ENST00000601665	ZNF727	A8MUV8	499 aa		7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	UBE2A	P49459	152 aa		7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	RPL39	P62891	51 aa	Known RBP	7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	KIAA0087	Q14695	138 aa		7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	MRPL55	Q7Z7F7	128 aa	Known RBP	7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	XAGE1A	Q9HD64	81 aa		7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	SPANXA1	Q9NS26	97 aa		7.07	□□□□□ -1.28
NUP62-223	ENST00000601665	HIGD1C	A8MV81	97 aa		7.06	□□□□□ -1.28
NUP62-223	ENST00000601665	TCAP	O15273	167 aa		7.06	□□□□□ -1.28
NUP62-223	ENST00000601665	PRSS2	P07478	247 aa		7.06	□□□□□ -1.28
NUP62-223	ENST00000601665	CKS1B	P61024	79 aa		7.06	□□□□□ -1.28
NUP62-223	ENST00000601665	CTAG1A	P78358	180 aa		7.05	□□□□□ -1.28
NUP62-223	ENST00000601665	ASB16-AS1	Q495Z4	193 aa		7.05	□□□□□ -1.28
NUP62-223	ENST00000601665	CT83	Q5H943	113 aa		7.05	□□□□□ -1.28
NUP62-223	ENST00000601665	NRAC	Q8N912	160 aa		7.05	□□□□□ -1.28
NUP62-223	ENST00000601665	RPL37AP8	A6NKH3	93 aa		7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	TAGLN2	P37802	199 aa	Known RBP	7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	SEC61B	P60468	96 aa	Known RBP	7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	MRPS36	P82909	103 aa	Known RBP	7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	FAM231D	Q6ZW35	169 aa		7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	TOMM7	Q9P0U1	55 aa		7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	TP73-AS1	Q9UF72	201 aa		7.04	□□□□□ -1.28
NUP62-223	ENST00000601665	RIG	Q13278	110 aa		7.03	□□□□□ -1.28
NUP62-223	ENST00000601665	GAGE10	A6NGK3	116 aa		7.02	□□□□□ -1.29
NUP62-223	ENST00000601665	IFI27	P40305	119 aa	Predicted RBP	7.02	□□□□□ -1.29
NUP62-223	ENST00000601665	C6orf226	Q5I0X4	101 aa		7.02	□□□□□ -1.29
NUP62-223	ENST00000601665	FP248	Q71RG6	208 aa	Predicted RBP	7.02	□□□□□ -1.29
NUP62-223	ENST00000601665	C20orf78	Q9BR46	151 aa		7.02	□□□□□ -1.29
NUP62-223	ENST00000601665	HMSD	A8MTL9	139 aa		7.01	□□□□□ -1.29
NUP62-223	ENST00000601665	CEBPG	P53567	150 aa		7.01	□□□□□ -1.29
NUP62-223	ENST00000601665	FAM104A	Q969W3	186 aa		7.01	□□□□□ -1.29
NUP62-223	ENST00000601665	LINC00167	Q96N53	147 aa		7.01	□□□□□ -1.29
NUP62-223	ENST00000601665	CKS2	P33552	79 aa		7	□□□□□ -1.29
NUP62-223	ENST00000601665	C4orf48	Q5BLP8	95 aa		7	□□□□□ -1.29
NUP62-223	ENST00000601665	RPL32	P62910	135 aa	Known RBP	6.99	□□□□□ -1.29
NUP62-223	ENST00000601665	MRPL51	Q4U2R6	128 aa	Known RBP	6.99	□□□□□ -1.29
NUP62-223	ENST00000601665	SPAG11A	Q6PDA7	123 aa		6.99	□□□□□ -1.29
NUP62-223	ENST00000601665		Q6ZN92	141 aa		6.99	□□□□□ -1.29
NUP62-223	ENST00000601665	LINC01561	Q8N1V8	128 aa		6.99	□□□□□ -1.29
NUP62-223	ENST00000601665	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.99	□□□□□ -1.29
NUP62-223	ENST00000601665	LINC00862	A6NCI5	91 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	KRTAP13-3	Q3SY46	172 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	NKAPP1	Q8N9T2	125 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	TMEM141	Q96I45	108 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	C2orf88	Q9BSF0	95 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	SMIM2	Q9BVW6	85 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	KRTAP4-1	Q9BYQ7	146 aa		6.98	□□□□□ -1.29
NUP62-223	ENST00000601665	TRBV24-1	A0A075B6N3	115 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	TNFRSF6B	O95407	300 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	CFC1B	P0CG36	223 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	RAB5A	P20339	215 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	FAM104B	Q5XKR9	115 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	TEX43	Q6ZNM6	134 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665	KRTAP13-1	Q8IUC0	172 aa		6.97	□□□□□ -1.29
NUP62-223	ENST00000601665		A0A1B0GVG6	124 aa		6.96	□□□□□ -1.3
NUP62-223	ENST00000601665		F8VRH5	84 aa		6.96	□□□□□ -1.3
NUP62-223	ENST00000601665	TMEM250	H0YL14	139 aa		6.96	□□□□□ -1.3
NUP62-223	ENST00000601665	PNRC1	Q12796	327 aa	Predicted RBP	6.96	□□□□□ -1.3
NUP62-223	ENST00000601665		Q8IZM0	81 aa		6.96	□□□□□ -1.3
NUP62-223	ENST00000601665	IGLV4-3	A0A075B6K6	122 aa		6.95	□□□□□ -1.3
NUP62-223	ENST00000601665	PRLH	P81277	87 aa		6.95	□□□□□ -1.3
NUP62-223	ENST00000601665	C3orf22	Q8N5N4	141 aa		6.95	□□□□□ -1.3
NUP62-223	ENST00000601665	IGKV2-28	A0A075B6P5	120 aa		6.94	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 208.1 ms