RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	LINC01549	A6NIU2	74 aa		13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995	IGIP	A6NJ69	53 aa		13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995	CIRBP	Q14011	172 aa	Known RBP	13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995		Q6ZN92	141 aa		13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995	C5orf38	Q86SI9	138 aa		13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995	PKIG	Q9Y2B9	76 aa		13.01	□□□□□ -0.33
GTPBP3-223	ENST00000600995	PAPPA-AS1	Q5QFB9	102 aa		13	□□□□□ -0.33
GTPBP3-223	ENST00000600995	TOMM6	Q96B49	74 aa		13	□□□□□ -0.33
GTPBP3-223	ENST00000600995	C2orf88	Q9BSF0	95 aa		13	□□□□□ -0.33
GTPBP3-223	ENST00000600995	TRAPPC1	Q9Y5R8	145 aa		13	□□□□□ -0.33
GTPBP3-223	ENST00000600995	AMELX	Q99217	191 aa		12.99	□□□□□ -0.33
GTPBP3-223	ENST00000600995	TIMM17A	Q99595	171 aa		12.99	□□□□□ -0.33
GTPBP3-223	ENST00000600995	VCX2	Q9H322	139 aa		12.99	□□□□□ -0.33
GTPBP3-223	ENST00000600995	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	12.99	□□□□□ -0.33
GTPBP3-223	ENST00000600995	FAT1	Q14517	4588 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	ABCA13	Q86UQ4	5058 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	PLA2G1B	P04054	148 aa	Known RBP	12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	SYCN	Q0VAF6	134 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	LINC00528	Q8N1L1	170 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	OR10D4P	Q8NGN7	298 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	C2orf48	Q96LS8	159 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	CARD19	Q96LW7	228 aa		12.98	□□□□□ -0.33
GTPBP3-223	ENST00000600995	COX6A2	Q02221	97 aa		12.97	□□□□□ -0.33
GTPBP3-223	ENST00000600995	LINC00242	Q5T6M2	205 aa		12.97	□□□□□ -0.33
GTPBP3-223	ENST00000600995	LINC00526	Q96FQ7	95 aa		12.97	□□□□□ -0.33
GTPBP3-223	ENST00000600995	IGLV4-69	A0A075B6H9	119 aa		12.96	□□□□□ -0.33
GTPBP3-223	ENST00000600995		F8WDY8	70 aa		12.96	□□□□□ -0.33
GTPBP3-223	ENST00000600995	UBE2D1	P51668	147 aa		12.96	□□□□□ -0.33
GTPBP3-223	ENST00000600995	ERAS	Q7Z444	233 aa		12.96	□□□□□ -0.33
GTPBP3-223	ENST00000600995	PANO1	I0J062	215 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	INAFM2	P0DMQ5	153 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	LINC00173	Q6ZV60	143 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	FA2H	Q7L5A8	372 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	FAM19A3	Q7Z5A8	133 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	DPH3	Q96FX2	82 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SMCO4	Q9NRQ5	59 aa		12.95	□□□□□ -0.34
GTPBP3-223	ENST00000600995	VPS13B	Q7Z7G8	4022 aa		12.94	□□□□□ -0.34
GTPBP3-223	ENST00000600995		A0A087WZ39	114 aa		12.94	□□□□□ -0.34
GTPBP3-223	ENST00000600995	LINC01561	Q8N1V8	128 aa		12.94	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SPACA4	Q8TDM5	124 aa		12.94	□□□□□ -0.34
GTPBP3-223	ENST00000600995	YPEL4	Q96NS1	127 aa		12.94	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SEC11A	P67812	179 aa		12.93	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SPAG11B	Q08648	103 aa		12.93	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SCGB3A1	Q96QR1	104 aa		12.93	□□□□□ -0.34
GTPBP3-223	ENST00000600995	CAMK2N2	Q96S95	79 aa		12.93	□□□□□ -0.34
GTPBP3-223	ENST00000600995	LINC00474	Q9P2X8	69 aa		12.93	□□□□□ -0.34
GTPBP3-223	ENST00000600995	ORAOV1	Q8WV07	137 aa		12.92	□□□□□ -0.34
GTPBP3-223	ENST00000600995	CHTF8	P0CG12	524 aa		12.91	□□□□□ -0.34
GTPBP3-223	ENST00000600995	RNF151	Q2KHN1	245 aa		12.91	□□□□□ -0.34
GTPBP3-223	ENST00000600995	SLC7A5P1	Q8MH63	180 aa		12.91	□□□□□ -0.34
GTPBP3-223	ENST00000600995	C18orf32	Q8TCD1	76 aa		12.91	□□□□□ -0.34
GTPBP3-223	ENST00000600995		A0A087WYN8	130 aa		12.9	□□□□□ -0.34
GTPBP3-223	ENST00000600995	ZC2HC1B	Q5TFG8	222 aa		12.9	□□□□□ -0.34
GTPBP3-223	ENST00000600995		Q6ZRU5	148 aa		12.9	□□□□□ -0.34
GTPBP3-223	ENST00000600995	PLAC8	Q9NZF1	115 aa		12.9	□□□□□ -0.34
GTPBP3-223	ENST00000600995	LINC00614	P0C842	121 aa		12.89	□□□□□ -0.35
GTPBP3-223	ENST00000600995	RAB5B	P61020	215 aa		12.89	□□□□□ -0.35
GTPBP3-223	ENST00000600995	HERVK_113	P63121	156 aa		12.89	□□□□□ -0.35
GTPBP3-223	ENST00000600995	SRRM2	Q9UQ35	2752 aa	Known RBP	12.88	□□□□□ -0.35
GTPBP3-223	ENST00000600995		A0A096LNI7	61 aa		12.88	□□□□□ -0.35
GTPBP3-223	ENST00000600995	LOC107984640	A0A0U1RRK4	108 aa		12.88	□□□□□ -0.35
GTPBP3-223	ENST00000600995	MAJIN	Q3KP22	176 aa		12.88	□□□□□ -0.35
GTPBP3-223	ENST00000600995	MRPL35	Q9NZE8	188 aa	Known RBP	12.88	□□□□□ -0.35
GTPBP3-223	ENST00000600995	IGKV2-24	A0A0C4DH68	120 aa		12.87	□□□□□ -0.35
GTPBP3-223	ENST00000600995	NDUFA1	O15239	70 aa		12.87	□□□□□ -0.35
GTPBP3-223	ENST00000600995	KIAA0087	Q14695	138 aa		12.85	□□□□□ -0.35
GTPBP3-223	ENST00000600995	URB1-AS1	Q96HZ7	61 aa		12.85	□□□□□ -0.35
GTPBP3-223	ENST00000600995	GEMIN7	Q9H840	131 aa	Known RBP	12.85	□□□□□ -0.35
GTPBP3-223	ENST00000600995	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	12.84	□□□□□ -0.35
GTPBP3-223	ENST00000600995	PTTG1IP	P53801	180 aa		12.84	□□□□□ -0.35
GTPBP3-223	ENST00000600995	KRTAP10-4	P60372	401 aa	Predicted RBP	12.84	□□□□□ -0.35
GTPBP3-223	ENST00000600995	CBLN2	Q8IUK8	224 aa		12.84	□□□□□ -0.35
GTPBP3-223	ENST00000600995	STPG4	Q8N801	248 aa		12.84	□□□□□ -0.35
GTPBP3-223	ENST00000600995	RPL37A	P61513	92 aa	Known RBP	12.83	□□□□□ -0.36
GTPBP3-223	ENST00000600995	PMVK	Q15126	192 aa		12.83	□□□□□ -0.36
GTPBP3-223	ENST00000600995	CST9L	Q9H4G1	147 aa		12.83	□□□□□ -0.36
GTPBP3-223	ENST00000600995		A0A096LNJ9	63 aa		12.82	□□□□□ -0.36
GTPBP3-223	ENST00000600995	TINCR	A0A1B0GVN0	87 aa		12.82	□□□□□ -0.36
GTPBP3-223	ENST00000600995	HBD	P02042	147 aa		12.82	□□□□□ -0.36
GTPBP3-223	ENST00000600995		A0A0J9YXV3	536 aa		12.81	□□□□□ -0.36
GTPBP3-223	ENST00000600995	GAGE2B	Q13066	116 aa		12.81	□□□□□ -0.36
GTPBP3-223	ENST00000600995	CDKN2A-AS1	Q9UH64	79 aa		12.81	□□□□□ -0.36
GTPBP3-223	ENST00000600995	TLX1NB	P0CAT3	122 aa		12.8	□□□□□ -0.36
GTPBP3-223	ENST00000600995	UNQ6190/PRO20217	Q6UXQ8	127 aa		12.8	□□□□□ -0.36
GTPBP3-223	ENST00000600995	PACRG	Q96M98	296 aa	Predicted RBP	12.8	□□□□□ -0.36
GTPBP3-223	ENST00000600995	IGLV5-45	A0A087WSX0	123 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	TRBV30	A0A0K0K1B3	111 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	PRSS2	P07478	247 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	C10orf25	Q5T742	122 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995		Q8IZM0	81 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	C7orf33	Q8WU49	177 aa		12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	CHCHD1	Q96BP2	118 aa	Known RBP	12.79	□□□□□ -0.36
GTPBP3-223	ENST00000600995	PDZD11	Q5EBL8	140 aa		12.78	□□□□□ -0.36
GTPBP3-223	ENST00000600995	C6orf226	Q5I0X4	101 aa		12.78	□□□□□ -0.36
GTPBP3-223	ENST00000600995	C6orf48	Q9UBA6	75 aa		12.78	□□□□□ -0.36
GTPBP3-223	ENST00000600995	ATP5L	O75964	103 aa		12.77	□□□□□ -0.37
GTPBP3-223	ENST00000600995	RPL18A	Q02543	176 aa	Known RBP	12.77	□□□□□ -0.37
GTPBP3-223	ENST00000600995	LINC00469	Q8N7U9	141 aa		12.77	□□□□□ -0.37
GTPBP3-223	ENST00000600995	CKS1B	P61024	79 aa		12.76	□□□□□ -0.37
GTPBP3-223	ENST00000600995	PMCHL1	Q16048	86 aa		12.75	□□□□□ -0.37

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