RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 SMKR1H3BMG3 65 aa8.74□□□□□ -1.01
USP29-204ENST00000600940 VCYO14598 125 aa8.74□□□□□ -1.01
USP29-204ENST00000600940 ZNF25P17030 456 aaPredicted RBP8.74□□□□□ -1.01
USP29-204ENST00000600940 RAB5AP20339 215 aa8.74□□□□□ -1.01
USP29-204ENST00000600940 SUMO2P61956 95 aaKnown RBP8.74□□□□□ -1.01
USP29-204ENST00000600940 OR5A1Q8NGJ0 315 aa8.74□□□□□ -1.01
USP29-204ENST00000600940 LINC00474Q9P2X8 69 aa8.74□□□□□ -1.01
USP29-204ENST00000600940 CCL25O15444 150 aa8.73□□□□□ -1.01
USP29-204ENST00000600940 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
USP29-204ENST00000600940 FOXI1Q12951 378 aa8.73□□□□□ -1.01
USP29-204ENST00000600940 SS18Q15532 418 aa8.73□□□□□ -1.01
USP29-204ENST00000600940 TMEM18Q96B42 140 aa8.73□□□□□ -1.01
USP29-204ENST00000600940 A0A096LNI7 61 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 IGHV1-58A0A0C4DH39 117 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 ZNF561-AS1K7EIQ3 104 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 G0S2P27469 103 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 PRR3P79522 188 aaKnown RBP8.72□□□□□ -1.01
USP29-204ENST00000600940 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 CARD19Q96LW7 228 aa8.72□□□□□ -1.01
USP29-204ENST00000600940 LINC00959A0A1B0GUT2 108 aa8.71□□□□□ -1.02
USP29-204ENST00000600940 SCO1O75880 301 aa8.71□□□□□ -1.02
USP29-204ENST00000600940 KIAA1644Q3SXP7 199 aa8.71□□□□□ -1.02
USP29-204ENST00000600940 NXT2Q9NPJ8 142 aaKnown RBP8.71□□□□□ -1.02
USP29-204ENST00000600940 LOC389332A0A1B0GUA5 103 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 NPYP01303 97 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 MALP21145 153 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 RAB5BP61020 215 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
USP29-204ENST00000600940 RPL32P62910 135 aaKnown RBP8.69□□□□□ -1.02
USP29-204ENST00000600940 SYCNQ0VAF6 134 aa8.69□□□□□ -1.02
USP29-204ENST00000600940 FA2HQ7L5A8 372 aa8.69□□□□□ -1.02
USP29-204ENST00000600940 NRACQ8N912 160 aa8.69□□□□□ -1.02
USP29-204ENST00000600940 LINC01600Q96MT4 127 aa8.69□□□□□ -1.02
USP29-204ENST00000600940 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 K7EMI3 77 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 TSHBP01222 138 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 GAGE2BQ13066 116 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 YPEL4Q96NS1 127 aa8.68□□□□□ -1.02
USP29-204ENST00000600940 COLCA2A8K830 154 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 POLR2KP53803 58 aaKnown RBP8.67□□□□□ -1.02
USP29-204ENST00000600940 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 CD164L2Q6UWJ8 174 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 SPINK6Q6UWN8 80 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 Q6ZRP5 223 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 Q8N8P6 123 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 ALKBH7Q9BT30 221 aaPredicted RBP8.67□□□□□ -1.02
USP29-204ENST00000600940 CDC42SE2Q9NRR3 84 aa8.67□□□□□ -1.02
USP29-204ENST00000600940 GAS8-AS1O95177 125 aa8.66□□□□□ -1.02
USP29-204ENST00000600940 ESDP10768 282 aa8.66□□□□□ -1.02
USP29-204ENST00000600940 TNXBP22105 4242 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 LOC107984640A0A0U1RRK4 108 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 COX7A2LO14548 114 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 TRGC2P03986 189 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 BAGE3Q86Y29 109 aa8.65□□□□□ -1.02
USP29-204ENST00000600940 IGLV4-69A0A075B6H9 119 aa8.64□□□□□ -1.03
USP29-204ENST00000600940 PRSS47A8MTI9 375 aa8.64□□□□□ -1.03
USP29-204ENST00000600940 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
USP29-204ENST00000600940 MRPL52Q86TS9 123 aaKnown RBP8.64□□□□□ -1.03
USP29-204ENST00000600940 CAMK2N2Q96S95 79 aa8.64□□□□□ -1.03
USP29-204ENST00000600940 TRAV13-1A0A0B4J241 112 aa8.63□□□□□ -1.03
USP29-204ENST00000600940 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
USP29-204ENST00000600940 PTTG1IPP53801 180 aa8.63□□□□□ -1.03
USP29-204ENST00000600940 ODF1Q14990 250 aa8.63□□□□□ -1.03
USP29-204ENST00000600940 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
USP29-204ENST00000600940 RNASE13Q5GAN3 156 aaKnown RBP8.62□□□□□ -1.03
USP29-204ENST00000600940 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
USP29-204ENST00000600940 LRP2P98164 4655 aa8.62□□□□□ -1.03
USP29-204ENST00000600940 H3BS24 57 aa8.61□□□□□ -1.03
USP29-204ENST00000600940 APOMO95445 188 aa8.61□□□□□ -1.03
USP29-204ENST00000600940 LINC00614P0C842 121 aa8.61□□□□□ -1.03
USP29-204ENST00000600940 RPL18AQ02543 176 aaKnown RBP8.61□□□□□ -1.03
USP29-204ENST00000600940 PAPPA-AS1Q5QFB9 102 aa8.61□□□□□ -1.03
USP29-204ENST00000600940 C18orf32Q8TCD1 76 aa8.61□□□□□ -1.03
USP29-204ENST00000600940 Q6ZN92 141 aa8.6□□□□□ -1.03
USP29-204ENST00000600940 C5orf38Q86SI9 138 aa8.6□□□□□ -1.03
USP29-204ENST00000600940 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
USP29-204ENST00000600940 HSBP1O75506 76 aa8.59□□□□□ -1.03
USP29-204ENST00000600940 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
USP29-204ENST00000600940 UBE2D4Q9Y2X8 147 aa8.59□□□□□ -1.03
USP29-204ENST00000600940 KRTAP10-8P60410 259 aa8.58□□□□□ -1.04
USP29-204ENST00000600940 SPAG11BQ08648 103 aa8.58□□□□□ -1.04
USP29-204ENST00000600940 SRSF9Q13242 221 aaKnown RBP eCLIP8.58□□□□□ -1.04
USP29-204ENST00000600940 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
USP29-204ENST00000600940 OPRPNQ99935 248 aaPredicted RBP8.58□□□□□ -1.04
USP29-204ENST00000600940 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
USP29-204ENST00000600940 RNF213Q63HN8 5207 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 A0A1W2PNN7 141 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 C2orf66Q6UXQ4 117 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 Q6ZUT4 128 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 C2orf48Q96LS8 159 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
USP29-204ENST00000600940 HBDP02042 147 aa8.56□□□□□ -1.04
USP29-204ENST00000600940 S100A6P06703 90 aa8.56□□□□□ -1.04
USP29-204ENST00000600940 C1orf137Q5JT78 98 aa8.56□□□□□ -1.04
USP29-204ENST00000600940 SCGB3A1Q96QR1 104 aa8.56□□□□□ -1.04
USP29-204ENST00000600940 C2orf88Q9BSF0 95 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms