RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 F8VRH5 84 aa15.27■□□□□ 0.03
IRF3-227ENST00000600911 K7EP13 123 aa15.27■□□□□ 0.03
IRF3-227ENST00000600911 SS18Q15532 418 aa15.27■□□□□ 0.03
IRF3-227ENST00000600911 GAGE12HA6NDE8 117 aa15.26■□□□□ 0.03
IRF3-227ENST00000600911 FOXI1Q12951 378 aa15.26■□□□□ 0.03
IRF3-227ENST00000600911 TRAV8-3A0A0A6YYJ7 113 aa15.25■□□□□ 0.03
IRF3-227ENST00000600911 Q6ZRN7 208 aaPredicted RBP15.25■□□□□ 0.03
IRF3-227ENST00000600911 CHAC1Q9BUX1 264 aa15.25■□□□□ 0.03
IRF3-227ENST00000600911 IGHV3OR16-9A0A0B4J2B5 98 aa15.25■□□□□ 0.03
IRF3-227ENST00000600911 TINCRA0A1B0GVN0 87 aa15.25■□□□□ 0.03
IRF3-227ENST00000600911 CDKN2A-AS1Q9UH64 79 aa15.25■□□□□ 0.03
IRF3-227ENST00000600911 NFE4Q86UQ8 179 aa15.24■□□□□ 0.03
IRF3-227ENST00000600911 C1orf43Q9BWL3 253 aa15.24■□□□□ 0.03
IRF3-227ENST00000600911 TRAV8-4A0A0B4J246 113 aa15.23■□□□□ 0.03
IRF3-227ENST00000600911 ZNF22P17026 224 aaPredicted RBP15.23■□□□□ 0.03
IRF3-227ENST00000600911 C5orf38Q86SI9 138 aa15.23■□□□□ 0.03
IRF3-227ENST00000600911 ATOH7Q8N100 152 aa15.23■□□□□ 0.03
IRF3-227ENST00000600911 RYR3Q15413 4870 aa15.22■□□□□ 0.03
IRF3-227ENST00000600911 CD164L2Q6UWJ8 174 aa15.21■□□□□ 0.03
IRF3-227ENST00000600911 IGLV5-45A0A087WSX0 123 aa15.21■□□□□ 0.02
IRF3-227ENST00000600911 CDPF1Q6NVV7 123 aa15.21■□□□□ 0.02
IRF3-227ENST00000600911 AKR1D1P51857 326 aa15.2■□□□□ 0.02
IRF3-227ENST00000600911 PYY3Q5JQD4 70 aa15.2■□□□□ 0.02
IRF3-227ENST00000600911 DPM2O94777 84 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 IGKCP01834 107 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 HERVK_113P63121 156 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 WFDC2Q14508 124 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 C6orf223Q8N319 242 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 LINC00469Q8N7U9 141 aa15.19■□□□□ 0.02
IRF3-227ENST00000600911 GEMIN7Q9H840 131 aaKnown RBP15.19■□□□□ 0.02
IRF3-227ENST00000600911 FAT2Q9NYQ8 4349 aa15.18■□□□□ 0.02
IRF3-227ENST00000600911 JOSD1Q15040 202 aaPredicted RBP15.17■□□□□ 0.02
IRF3-227ENST00000600911 SCGB1D1O95968 90 aa15.17■□□□□ 0.02
IRF3-227ENST00000600911 MAJINQ3KP22 176 aa15.17■□□□□ 0.02
IRF3-227ENST00000600911 SPINK8P0C7L1 97 aa15.16■□□□□ 0.02
IRF3-227ENST00000600911 TMEM170BQ5T4T1 132 aa15.16■□□□□ 0.02
IRF3-227ENST00000600911 A0A087WZ39 114 aa15.15■□□□□ 0.02
IRF3-227ENST00000600911 LECT2O14960 151 aa15.15■□□□□ 0.02
IRF3-227ENST00000600911 IGHV3-64A0A075B6Q5 118 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 PLNP26678 52 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 SEC11AP67812 179 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 C1orf134Q5TEV5 83 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 SMIM1B2RUZ4 78 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 COX7A2LO14548 114 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 RTL8CO15255 209 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 STPG4Q8N801 248 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 C15orf56Q8N910 161 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 RMI2Q96E14 147 aa15.14■□□□□ 0.01
IRF3-227ENST00000600911 hDV102S1A0JD36 115 aa15.13■□□□□ 0.01
IRF3-227ENST00000600911 TMEM223A0PJW6 202 aa15.13■□□□□ 0.01
IRF3-227ENST00000600911 C20orf202A1L168 122 aa15.13■□□□□ 0.01
IRF3-227ENST00000600911 DNAH11Q96DT5 4516 aa15.12■□□□□ 0.01
IRF3-227ENST00000600911 LINC00526Q96FQ7 95 aa15.11■□□□□ 0.01
IRF3-227ENST00000600911 TM2D2Q9BX73 214 aa15.1■□□□□ 0.01
IRF3-227ENST00000600911 LRCOL1A6NCL2 159 aa15.1■□□□□ 0.01
IRF3-227ENST00000600911 PSCAO43653 123 aa15.1■□□□□ 0.01
IRF3-227ENST00000600911 ANKRD39Q53RE8 183 aa15.1■□□□□ 0.01
IRF3-227ENST00000600911 USP17L23D6RBM5 183 aa15.09■□□□□ 0.01
IRF3-227ENST00000600911 HIGD2BQ4VC39 106 aa15.08■□□□□ 0
IRF3-227ENST00000600911 COX11Q9Y6N1 276 aa15.08■□□□□ 0
IRF3-227ENST00000600911 IGKV2D-26A0A0A0MRZ7 120 aa15.07■□□□□ 0
IRF3-227ENST00000600911 TSPEAR-AS2P59090 65 aa15.07■□□□□ 0
IRF3-227ENST00000600911 IGLV5-39A0A0G2JS06 123 aa15.06■□□□□ 0
IRF3-227ENST00000600911 MALP21145 153 aa15.06■□□□□ 0
IRF3-227ENST00000600911 ORAOV1Q8WV07 137 aa15.06■□□□□ 0
IRF3-227ENST00000600911 H3BRM9 83 aa15.06■□□□□ 0
IRF3-227ENST00000600911 TNP2Q05952 138 aa15.06■□□□□ 0
IRF3-227ENST00000600911 KIAA0087Q14695 138 aa15.06■□□□□ 0
IRF3-227ENST00000600911 LINC01561Q8N1V8 128 aa15.04■□□□□ -0
IRF3-227ENST00000600911 IGHV1-58A0A0C4DH39 117 aa15.03■□□□□ -0
IRF3-227ENST00000600911 TOMM7Q9P0U1 55 aa15.03■□□□□ -0
IRF3-227ENST00000600911 TTTY13Q9BZ97 58 aa15.03■□□□□ -0
IRF3-227ENST00000600911 PKD1P98161 4303 aa15.01□□□□□ -0.01
IRF3-227ENST00000600911 A0A087WTM6 91 aa15.01□□□□□ -0.01
IRF3-227ENST00000600911 SLPIP03973 132 aa15.01□□□□□ -0.01
IRF3-227ENST00000600911 SPAG11BQ08648 103 aa15.01□□□□□ -0.01
IRF3-227ENST00000600911 GVQW2A0A096LPI5 108 aaPredicted RBP15□□□□□ -0.01
IRF3-227ENST00000600911 E9PLD3 99 aa15□□□□□ -0.01
IRF3-227ENST00000600911 FUSP35637 526 aaKnown RBP eCLIP15□□□□□ -0.01
IRF3-227ENST00000600911 C2orf82Q6UX34 121 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 COX7B2Q8TF08 81 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 HECTD4Q9Y4D8 3996 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 DNAH5Q8TE73 4624 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 APOMO95445 188 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 NTN5Q8WTR8 489 aaPredicted RBP14.99□□□□□ -0.01
IRF3-227ENST00000600911 TP73-AS1Q9UF72 201 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 PAM16Q9Y3D7 125 aa14.99□□□□□ -0.01
IRF3-227ENST00000600911 LEPROTO15243 131 aa14.98□□□□□ -0.01
IRF3-227ENST00000600911 C10orf25Q5T742 122 aa14.97□□□□□ -0.01
IRF3-227ENST00000600911 Q8IZM0 81 aa14.97□□□□□ -0.01
IRF3-227ENST00000600911 HERVK_113P61574 105 aa14.96□□□□□ -0.01
IRF3-227ENST00000600911 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.95□□□□□ -0.02
IRF3-227ENST00000600911 J3QQQ9 107 aa14.95□□□□□ -0.02
IRF3-227ENST00000600911 CFAP161Q6P656 301 aa14.95□□□□□ -0.02
IRF3-227ENST00000600911 PCP2Q8IVA1 136 aa14.95□□□□□ -0.02
IRF3-227ENST00000600911 Q8N814 137 aa14.95□□□□□ -0.02
IRF3-227ENST00000600911 NMUP48645 174 aa14.94□□□□□ -0.02
IRF3-227ENST00000600911 SPATA45Q537H7 98 aa14.94□□□□□ -0.02
IRF3-227ENST00000600911 UNQ6190/PRO20217Q6UXQ8 127 aa14.94□□□□□ -0.02
IRF3-227ENST00000600911 VAMP8Q9BV40 100 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms