RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FSIP2Q5CZC0 6907 aa10.95□□□□□ -0.66
SSBP4-207ENST00000600244 UBE2L6O14933 153 aa10.94□□□□□ -0.66
SSBP4-207ENST00000600244 ZNF25P17030 456 aaPredicted RBP10.94□□□□□ -0.66
SSBP4-207ENST00000600244 PRSS3P2Q8NHM4 247 aa10.94□□□□□ -0.66
SSBP4-207ENST00000600244 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
SSBP4-207ENST00000600244 PRR34Q9NV39 138 aa10.94□□□□□ -0.66
SSBP4-207ENST00000600244 CSDC2Q9Y534 153 aaKnown RBP10.94□□□□□ -0.66
SSBP4-207ENST00000600244 IGHV3-64A0A075B6Q5 118 aa10.93□□□□□ -0.66
SSBP4-207ENST00000600244 ORMDL2Q53FV1 153 aa10.93□□□□□ -0.66
SSBP4-207ENST00000600244 UBE2D4Q9Y2X8 147 aa10.93□□□□□ -0.66
SSBP4-207ENST00000600244 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
SSBP4-207ENST00000600244 FAM104AQ969W3 186 aa10.92□□□□□ -0.66
SSBP4-207ENST00000600244 CRPP02741 224 aa10.91□□□□□ -0.66
SSBP4-207ENST00000600244 ANGP03950 147 aaKnown RBP10.91□□□□□ -0.66
SSBP4-207ENST00000600244 SLPIP03973 132 aa10.91□□□□□ -0.66
SSBP4-207ENST00000600244 TMEM18Q96B42 140 aa10.91□□□□□ -0.66
SSBP4-207ENST00000600244 LINC00614P0C842 121 aa10.9□□□□□ -0.66
SSBP4-207ENST00000600244 MIAQ16674 131 aa10.9□□□□□ -0.66
SSBP4-207ENST00000600244 LCE2DQ5TA82 110 aaPredicted RBP10.9□□□□□ -0.66
SSBP4-207ENST00000600244 AMMECR1LQ6DCA0 310 aa10.9□□□□□ -0.66
SSBP4-207ENST00000600244 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
SSBP4-207ENST00000600244 SMAGPQ0VAQ4 97 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
SSBP4-207ENST00000600244 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 LINC00269Q8N2A0 174 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 SPANXA1Q9NS26 97 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 AP5S1Q9NUS5 200 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
SSBP4-207ENST00000600244 C2orf66Q6UXQ4 117 aa10.88□□□□□ -0.67
SSBP4-207ENST00000600244 OR5A1Q8NGJ0 315 aa10.88□□□□□ -0.67
SSBP4-207ENST00000600244 A0A096LNJ9 63 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 G0S2P27469 103 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 RAB5BP61020 215 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 MRPS36P82909 103 aaKnown RBP10.87□□□□□ -0.67
SSBP4-207ENST00000600244 REG3AQ06141 175 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 ZNF664Q8N3J9 261 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 TOMM6Q96B49 74 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 CYSLTR1Q9Y271 337 aa10.87□□□□□ -0.67
SSBP4-207ENST00000600244 LINC00310P59036 64 aa10.86□□□□□ -0.67
SSBP4-207ENST00000600244 CHCHD1Q96BP2 118 aaKnown RBP10.86□□□□□ -0.67
SSBP4-207ENST00000600244 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
SSBP4-207ENST00000600244 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BKO60814 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BJP06899 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 NPSP0C0P6 89 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BOP23527 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BBP33778 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BDP58876 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BCP62807 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST2H2BEQ16778 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
SSBP4-207ENST00000600244 Q6ZUT4 128 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BNQ99877 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 HIST1H2BMQ99879 126 aa10.85□□□□□ -0.67
SSBP4-207ENST00000600244 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
SSBP4-207ENST00000600244 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-207ENST00000600244 LINC01549A6NIU2 74 aa10.84□□□□□ -0.67
SSBP4-207ENST00000600244 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
SSBP4-207ENST00000600244 OPRPNQ99935 248 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-207ENST00000600244 TRAV8-4A0A0B4J246 113 aa10.83□□□□□ -0.68
SSBP4-207ENST00000600244 TIMM17AQ99595 171 aa10.83□□□□□ -0.68
SSBP4-207ENST00000600244 MAJINQ3KP22 176 aa10.82□□□□□ -0.68
SSBP4-207ENST00000600244 ERASQ7Z444 233 aa10.82□□□□□ -0.68
SSBP4-207ENST00000600244 BAGE3Q86Y29 109 aa10.82□□□□□ -0.68
SSBP4-207ENST00000600244 LINC00959A0A1B0GUT2 108 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 SERF1AO75920 110 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 HBDP02042 147 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 COX6A2Q02221 97 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 PDZD11Q5EBL8 140 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
SSBP4-207ENST00000600244 LINC00173Q6ZV60 143 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 STPG4Q8N801 248 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 AMELXQ99217 191 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
SSBP4-207ENST00000600244 NUPR1O60356 82 aa10.8□□□□□ -0.68
SSBP4-207ENST00000600244 PMCHL1Q16048 86 aa10.8□□□□□ -0.68
SSBP4-207ENST00000600244 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
SSBP4-207ENST00000600244 SCGB3A1Q96QR1 104 aa10.8□□□□□ -0.68
SSBP4-207ENST00000600244 C1orf196B1AJZ1 125 aa10.79□□□□□ -0.68
SSBP4-207ENST00000600244 CCL25O15444 150 aa10.79□□□□□ -0.68
SSBP4-207ENST00000600244 PRR4Q16378 134 aa10.79□□□□□ -0.68
SSBP4-207ENST00000600244 COA6Q5JTJ3 125 aaKnown RBP10.79□□□□□ -0.68
SSBP4-207ENST00000600244 Q6ZRP5 223 aa10.79□□□□□ -0.68
SSBP4-207ENST00000600244 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
SSBP4-207ENST00000600244 HSBP1O75506 76 aa10.78□□□□□ -0.68
SSBP4-207ENST00000600244 IGKV3OR2-268A0A0C4DH90 116 aa10.77□□□□□ -0.69
SSBP4-207ENST00000600244 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
SSBP4-207ENST00000600244 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 SS18Q15532 418 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 PAPPA-AS1Q5QFB9 102 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 VCX2Q9H322 139 aa10.76□□□□□ -0.69
SSBP4-207ENST00000600244 UBE2D1P51668 147 aa10.75□□□□□ -0.69
SSBP4-207ENST00000600244 FOXI1Q12951 378 aa10.75□□□□□ -0.69
SSBP4-207ENST00000600244 Q6ZN92 141 aa10.75□□□□□ -0.69
SSBP4-207ENST00000600244 PRR26Q8N8Z3 221 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms