RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 COX7A2LO14548 114 aa8.15□□□□□ -1.1
TGFB1-204ENST00000600196 CLPSL2Q6UWE3 100 aa8.15□□□□□ -1.1
TGFB1-204ENST00000600196 HIST3H2BBQ8N257 126 aa8.15□□□□□ -1.1
TGFB1-204ENST00000600196 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
TGFB1-204ENST00000600196 KMT2AQ03164 3969 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 IGKV3OR2-268A0A0C4DH90 116 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 LRCOL1A6NCL2 159 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 F8VRH5 84 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 H3BRM9 83 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 FABP4P15090 132 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 XCL1P47992 114 aa8.14□□□□□ -1.11
TGFB1-204ENST00000600196 RNASE13Q5GAN3 156 aaKnown RBP8.14□□□□□ -1.11
TGFB1-204ENST00000600196 CHTOPQ9Y3Y2 248 aaKnown RBP8.14□□□□□ -1.11
TGFB1-204ENST00000600196 IGLV10-54A0A075B6I4 117 aa8.13□□□□□ -1.11
TGFB1-204ENST00000600196 SYS1-DBNDD2H3BUS1 97 aa8.13□□□□□ -1.11
TGFB1-204ENST00000600196 PLNP26678 52 aa8.13□□□□□ -1.11
TGFB1-204ENST00000600196 SNRPEP62304 92 aaKnown RBP8.13□□□□□ -1.11
TGFB1-204ENST00000600196 OR10D4PQ8NGN7 298 aa8.13□□□□□ -1.11
TGFB1-204ENST00000600196 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
TGFB1-204ENST00000600196 A0A087WTM6 91 aa8.12□□□□□ -1.11
TGFB1-204ENST00000600196 MALP21145 153 aa8.12□□□□□ -1.11
TGFB1-204ENST00000600196 ODF1Q14990 250 aa8.12□□□□□ -1.11
TGFB1-204ENST00000600196 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
TGFB1-204ENST00000600196 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
TGFB1-204ENST00000600196 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
TGFB1-204ENST00000600196 GVQW2A0A096LPI5 108 aaPredicted RBP8.11□□□□□ -1.11
TGFB1-204ENST00000600196 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
TGFB1-204ENST00000600196 C20orf202A1L168 122 aa8.11□□□□□ -1.11
TGFB1-204ENST00000600196 CDPF1Q6NVV7 123 aa8.11□□□□□ -1.11
TGFB1-204ENST00000600196 HIST1H2BLQ99880 126 aa8.11□□□□□ -1.11
TGFB1-204ENST00000600196 IGHV3-64A0A075B6Q5 118 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 USP17L23D6RBM5 183 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 COX6A2Q02221 97 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 LINC01545Q5VT33 79 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 C2orf48Q96LS8 159 aa8.1□□□□□ -1.11
TGFB1-204ENST00000600196 C11orf86A6NJI1 115 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 DPM2O94777 84 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 ZC2HC1BQ5TFG8 222 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 LINC00469Q8N7U9 141 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 Q8N814 137 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 CHAC1Q9BUX1 264 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 MRPL35Q9NZE8 188 aaKnown RBP8.09□□□□□ -1.11
TGFB1-204ENST00000600196 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
TGFB1-204ENST00000600196 CNBPP62633 177 aaKnown RBP8.08□□□□□ -1.12
TGFB1-204ENST00000600196 TNP2Q05952 138 aa8.08□□□□□ -1.12
TGFB1-204ENST00000600196 C5orf38Q86SI9 138 aa8.08□□□□□ -1.12
TGFB1-204ENST00000600196 PKIGQ9Y2B9 76 aa8.08□□□□□ -1.12
TGFB1-204ENST00000600196 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.07□□□□□ -1.12
TGFB1-204ENST00000600196 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 IGKCP01834 107 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 ZNF22P17026 224 aaPredicted RBP8.07□□□□□ -1.12
TGFB1-204ENST00000600196 CXCL5P42830 114 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 Q8IZM0 81 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 C15orf56Q8N910 161 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 RYR3Q15413 4870 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 DNAH2Q9P225 4427 aa8.07□□□□□ -1.12
TGFB1-204ENST00000600196 DNAH17Q9UFH2 4485 aa8.06□□□□□ -1.12
TGFB1-204ENST00000600196 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
TGFB1-204ENST00000600196 KRTDAPP60985 99 aa8.06□□□□□ -1.12
TGFB1-204ENST00000600196 TMEM223A0PJW6 202 aa8.05□□□□□ -1.12
TGFB1-204ENST00000600196 SMIM1B2RUZ4 78 aa8.05□□□□□ -1.12
TGFB1-204ENST00000600196 HERVK_113P61574 105 aa8.05□□□□□ -1.12
TGFB1-204ENST00000600196 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
TGFB1-204ENST00000600196 hDV102S1A0JD36 115 aa8.04□□□□□ -1.12
TGFB1-204ENST00000600196 PRSS2P07478 247 aa8.04□□□□□ -1.12
TGFB1-204ENST00000600196 KIAA0087Q14695 138 aa8.04□□□□□ -1.12
TGFB1-204ENST00000600196 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
TGFB1-204ENST00000600196 DNAH10Q8IVF4 4471 aa8.04□□□□□ -1.12
TGFB1-204ENST00000600196 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
TGFB1-204ENST00000600196 SPAG11BQ08648 103 aa8.03□□□□□ -1.12
TGFB1-204ENST00000600196 C6orf226Q5I0X4 101 aa8.03□□□□□ -1.12
TGFB1-204ENST00000600196 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 H0Y8G0 127 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 NDUFA1O15239 70 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 WFDC2Q14508 124 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 C9orf163Q8N9P6 203 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
TGFB1-204ENST00000600196 LINC00587B1AMM8 73 aa8.01□□□□□ -1.13
TGFB1-204ENST00000600196 CKS1BP61024 79 aa8.01□□□□□ -1.13
TGFB1-204ENST00000600196 SYCNQ0VAF6 134 aa8.01□□□□□ -1.13
TGFB1-204ENST00000600196 COX7B2Q8TF08 81 aa8.01□□□□□ -1.13
TGFB1-204ENST00000600196 E9PLD3 99 aa8□□□□□ -1.13
TGFB1-204ENST00000600196 LEPROTO15243 131 aa8□□□□□ -1.13
TGFB1-204ENST00000600196 NMUP48645 174 aa8□□□□□ -1.13
TGFB1-204ENST00000600196 CAMK2N2Q96S95 79 aa8□□□□□ -1.13
TGFB1-204ENST00000600196 TMA7Q9Y2S6 64 aaKnown RBP8□□□□□ -1.13
TGFB1-204ENST00000600196 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 LECT2O14960 151 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 SPINK8P0C7L1 97 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 TLX1NBP0CAT3 122 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 HERV-K104P63124 156 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 JOSD1Q15040 202 aaPredicted RBP7.99□□□□□ -1.13
TGFB1-204ENST00000600196 HIGD2BQ4VC39 106 aa7.99□□□□□ -1.13
TGFB1-204ENST00000600196 HSBP1L1C9JCN9 74 aa7.98□□□□□ -1.13
TGFB1-204ENST00000600196 SLPIP03973 132 aa7.98□□□□□ -1.13
TGFB1-204ENST00000600196 COX17Q14061 63 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms