RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TANC2Q9HCD6 1990 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 KIAA1549Q9HCM3 1950 aa8.67□□□□□ -1.02
SCN8A-208ENST00000599343 C2CD3Q4AC94 2353 aa8.67□□□□□ -1.02
SCN8A-208ENST00000599343 LOC107984640A0A0U1RRK4 108 aa8.67□□□□□ -1.02
SCN8A-208ENST00000599343 C1orf195Q5TG92 126 aa8.67□□□□□ -1.02
SCN8A-208ENST00000599343 RETNQ9HD89 108 aa8.67□□□□□ -1.02
SCN8A-208ENST00000599343 LELP1Q5T871 98 aa8.66□□□□□ -1.02
SCN8A-208ENST00000599343 Q6Q795 121 aa8.66□□□□□ -1.02
SCN8A-208ENST00000599343 PLXNB1O43157 2135 aa8.66□□□□□ -1.02
SCN8A-208ENST00000599343 NANOS2P60321 138 aaKnown RBP8.65□□□□□ -1.02
SCN8A-208ENST00000599343 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.03
SCN8A-208ENST00000599343 MRPS36P82909 103 aaKnown RBP8.65□□□□□ -1.03
SCN8A-208ENST00000599343 Q6JHZ5 121 aa8.65□□□□□ -1.03
SCN8A-208ENST00000599343 SOSTDC1Q6X4U4 206 aa8.65□□□□□ -1.03
SCN8A-208ENST00000599343 MED12LQ86YW9 2145 aa8.65□□□□□ -1.03
SCN8A-208ENST00000599343 C11orf71Q6IPW1 123 aa8.64□□□□□ -1.03
SCN8A-208ENST00000599343 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SCN8A-208ENST00000599343 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
SCN8A-208ENST00000599343 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
SCN8A-208ENST00000599343 OTOGLQ3ZCN5 2332 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 CYSRT1A8MQ03 144 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 LY6G6DO95868 133 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.63□□□□□ -1.03
SCN8A-208ENST00000599343 CRIP2P52943 208 aaPredicted RBP8.63□□□□□ -1.03
SCN8A-208ENST00000599343 UBE2D2P62837 147 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 COX17Q14061 63 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 KIAA1549LQ6ZVL6 1849 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 LY6G6CO95867 125 aa8.63□□□□□ -1.03
SCN8A-208ENST00000599343 A0A087WVE0 104 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
SCN8A-208ENST00000599343 CDC42SE2Q9NRR3 84 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 ESRGQ1W209 222 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 EDN2P20800 178 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 ALPK3Q96L96 1907 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 NTM-AS1Q6ZSK4 140 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 Q6ZVQ6 151 aa8.62□□□□□ -1.03
SCN8A-208ENST00000599343 Q8IZM0 81 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 LINC01006Q8NI28 216 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 C2orf16Q68DN1 1984 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 NUP210LQ5VU65 1888 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 FSTL3O95633 263 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 Q8N6K4 173 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 TECTAO75443 2155 aa8.61□□□□□ -1.03
SCN8A-208ENST00000599343 UNQ6190/PRO20217Q6UXQ8 127 aa8.6□□□□□ -1.03
SCN8A-208ENST00000599343 LINC00208Q96KT6 92 aa8.6□□□□□ -1.03
SCN8A-208ENST00000599343 M0QXV9 152 aa8.6□□□□□ -1.03
SCN8A-208ENST00000599343 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
SCN8A-208ENST00000599343 A0A087WYN8 130 aa8.6□□□□□ -1.03
SCN8A-208ENST00000599343 SMIM26A0A096LP01 95 aa8.59□□□□□ -1.03
SCN8A-208ENST00000599343 COX6A2Q02221 97 aa8.59□□□□□ -1.03
SCN8A-208ENST00000599343 IGIPA6NJ69 53 aa8.59□□□□□ -1.03
SCN8A-208ENST00000599343 MRGPRG-AS1Q2M3A8 158 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 LINC00242Q5T6M2 205 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 ZNF843Q8N446 348 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 TRAV7A0A075B6U4 112 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 Q8N814 137 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 TRBV10-3A0A0K0K1G6 114 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 CIRBP-AS1Q8TBR5 109 aa8.58□□□□□ -1.04
SCN8A-208ENST00000599343 IGLV1-40P01703 118 aa8.57□□□□□ -1.04
SCN8A-208ENST00000599343 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
SCN8A-208ENST00000599343 NAV3Q8IVL0 2385 aa8.57□□□□□ -1.04
SCN8A-208ENST00000599343 IGHV6-1A0A0B4J1U7 121 aa8.57□□□□□ -1.04
SCN8A-208ENST00000599343 PMAIP1Q13794 54 aa8.57□□□□□ -1.04
SCN8A-208ENST00000599343 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 CCDC168Q8NDH2 2452 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 X6R8D5 127 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
SCN8A-208ENST00000599343 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 LINC00310P59036 64 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 C6orf223Q8N319 242 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 HIVEP3Q5T1R4 2406 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 PRYO14603 147 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 REG3GQ6UW15 175 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
SCN8A-208ENST00000599343 PSPHP1O15172 72 aa8.54□□□□□ -1.04
SCN8A-208ENST00000599343 LINC01547P58512 204 aaPredicted RBP8.54□□□□□ -1.04
SCN8A-208ENST00000599343 CHCHD7Q9BUK0 85 aa8.54□□□□□ -1.04
SCN8A-208ENST00000599343 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
SCN8A-208ENST00000599343 ZNF580Q9UK33 172 aa8.54□□□□□ -1.04
SCN8A-208ENST00000599343 MYO9AB2RTY4 2548 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 PCNX3Q9H6A9 2034 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 SPINK1P00995 79 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 BEAN1Q3B7T3 259 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 DSCAMO60469 2012 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 CNFNQ9BYD5 112 aa8.53□□□□□ -1.04
SCN8A-208ENST00000599343 ABCA2Q9BZC7 2435 aa8.52□□□□□ -1.05
SCN8A-208ENST00000599343 RPL28P46779 137 aaKnown RBP8.52□□□□□ -1.05
SCN8A-208ENST00000599343 EGFEM1PQ0D2K5 195 aa8.51□□□□□ -1.05
SCN8A-208ENST00000599343 ODF3L2Q3SX64 289 aa8.51□□□□□ -1.05
SCN8A-208ENST00000599343 Q8N3U1 123 aa8.51□□□□□ -1.05
SCN8A-208ENST00000599343 ARHGAP32A7KAX9 2087 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms