RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 GAGE2EQ4V326 116 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 LINC00304Q8N9R0 145 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 MBD3L1Q8WWY6 194 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 SMIM12Q96EX1 92 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 GAGE2DQ9UEU5 116 aa5.33□□□□□ -1.56
LINC00343-205ENST00000598229 UPK1BO75841 260 aa5.32□□□□□ -1.56
LINC00343-205ENST00000598229 KRTAP13-2Q52LG2 175 aa5.32□□□□□ -1.56
LINC00343-205ENST00000598229 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
LINC00343-205ENST00000598229 SMIM15Q7Z3B0 74 aa5.32□□□□□ -1.56
LINC00343-205ENST00000598229 S100ZQ8WXG8 99 aa5.32□□□□□ -1.56
LINC00343-205ENST00000598229 TRAV13-1A0A0B4J241 112 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 TRBV27A0A0K0K1C4 114 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 C7orf77A4D0Y5 90 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 POLR2KP53803 58 aaKnown RBP5.31□□□□□ -1.56
LINC00343-205ENST00000598229 FAM229BQ4G0N7 80 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 LINC00242Q5T6M2 205 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 ORAOV1Q8WV07 137 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 C11orf52Q96A22 123 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 KRTAP4-1Q9BYQ7 146 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 CTDSP1Q9GZU7 261 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 ST20Q9HBF5 79 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 BIN3Q9NQY0 253 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
LINC00343-205ENST00000598229 IGHV3OR16-9A0A0B4J2B5 98 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 NDUFC2-KCTD14E9PQ53 114 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 CFC1BP0CG36 223 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
LINC00343-205ENST00000598229 IFITM3Q01628 133 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 LBHQ53QV2 105 aaPredicted RBP5.3□□□□□ -1.56
LINC00343-205ENST00000598229 Q5BKY6 102 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 CENPWQ5EE01 88 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 KCNRGQ8N5I3 272 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 LINC00337Q8N6G1 96 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 TMEM242Q9NWH2 141 aa5.3□□□□□ -1.56
LINC00343-205ENST00000598229 TRBV30A0A0K0K1B3 111 aa5.29□□□□□ -1.56
LINC00343-205ENST00000598229 BCE1O60756 84 aa5.29□□□□□ -1.56
LINC00343-205ENST00000598229 FOXA3P55318 350 aaPredicted RBP5.29□□□□□ -1.56
LINC00343-205ENST00000598229 CCL20P78556 96 aa5.29□□□□□ -1.56
LINC00343-205ENST00000598229 C9orf129Q5T035 196 aaKnown RBP5.29□□□□□ -1.56
LINC00343-205ENST00000598229 FP248Q71RG6 208 aaPredicted RBP5.29□□□□□ -1.56
LINC00343-205ENST00000598229 TIMM21Q9BVV7 248 aa5.29□□□□□ -1.56
LINC00343-205ENST00000598229 RNASE7Q9H1E1 156 aaKnown RBP5.29□□□□□ -1.56
LINC00343-205ENST00000598229 UBE2D4Q9Y2X8 147 aa5.29□□□□□ -1.56
LINC00343-205ENST00000598229 UMAD1C9J7I0 102 aa5.28□□□□□ -1.56
LINC00343-205ENST00000598229 GNG4P50150 75 aa5.28□□□□□ -1.56
LINC00343-205ENST00000598229 DEFA1P59665 94 aa5.28□□□□□ -1.56
LINC00343-205ENST00000598229 ANAPC11Q9NYG5 84 aa5.28□□□□□ -1.56
LINC00343-205ENST00000598229 C22orf24Q9Y442 160 aa5.28□□□□□ -1.56
LINC00343-205ENST00000598229 VCYO14598 125 aa5.27□□□□□ -1.57
LINC00343-205ENST00000598229 KIAA0087Q14695 138 aa5.27□□□□□ -1.57
LINC00343-205ENST00000598229 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
LINC00343-205ENST00000598229 RNASE13Q5GAN3 156 aaKnown RBP5.27□□□□□ -1.57
LINC00343-205ENST00000598229 NDUFA13Q9P0J0 144 aa5.27□□□□□ -1.57
LINC00343-205ENST00000598229 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
LINC00343-205ENST00000598229 RAB19A4D1S5 217 aa5.26□□□□□ -1.57
LINC00343-205ENST00000598229 GIPP09681 153 aaPredicted RBP5.26□□□□□ -1.57
LINC00343-205ENST00000598229 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
LINC00343-205ENST00000598229 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
LINC00343-205ENST00000598229 TP73-AS1Q9UF72 201 aa5.26□□□□□ -1.57
LINC00343-205ENST00000598229 TRBV20OR9-2A0A075B6H5 130 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 FXYD6-FXYD2A0A087WZ82 144 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 A0A1B0GV50 99 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 FCER1GP30273 86 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 SPAG11AQ6PDA7 123 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 Q6ZUT4 128 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 TMEM18Q96B42 140 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 MANBALQ9NQG1 85 aa5.25□□□□□ -1.57
LINC00343-205ENST00000598229 MT1HP80294 61 aa5.24□□□□□ -1.57
LINC00343-205ENST00000598229 ZNF727A8MUV8 499 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 PDE6DO43924 150 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 PPP1R17O96001 155 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 MRPL55Q7Z7F7 128 aaKnown RBP5.23□□□□□ -1.57
LINC00343-205ENST00000598229 KRTAP13-1Q8IUC0 172 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 KIR2DL4Q99706 377 aa5.23□□□□□ -1.57
LINC00343-205ENST00000598229 TRIAP1O43715 76 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 TNFRSF6BO95407 300 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
LINC00343-205ENST00000598229 MRPS36P82909 103 aaKnown RBP5.22□□□□□ -1.57
LINC00343-205ENST00000598229 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 C2orf82Q6UX34 121 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 TMEM191AQ9H0A3 160 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 GNG13Q9P2W3 67 aa5.22□□□□□ -1.57
LINC00343-205ENST00000598229 TGIF2-C20orf24A0A0A6YYL0 155 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 A0A1B0GVG6 124 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 A8MWL6 223 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 RAB4AP20338 218 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 KRTAP10-6P60371 365 aaPredicted RBP5.21□□□□□ -1.58
LINC00343-205ENST00000598229 LINC01561Q8N1V8 128 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 SPANXA1Q9NS26 97 aa5.21□□□□□ -1.58
LINC00343-205ENST00000598229 TCAPO15273 167 aa5.2□□□□□ -1.58
LINC00343-205ENST00000598229 SUMO2P61956 95 aaKnown RBP5.2□□□□□ -1.58
LINC00343-205ENST00000598229 MED9Q9NWA0 146 aa5.2□□□□□ -1.58
LINC00343-205ENST00000598229 IFITM10A6NMD0 228 aa5.19□□□□□ -1.58
LINC00343-205ENST00000598229 PPP1R2P9O14990 202 aa5.19□□□□□ -1.58
LINC00343-205ENST00000598229 UBE2AP49459 152 aa5.19□□□□□ -1.58
LINC00343-205ENST00000598229 HBBP68871 147 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms