RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	C20orf78	Q9BR46	151 aa		6.43	□□□□□ -1.38
LSM4-205	ENST00000597776	TRBV24-1	A0A075B6N3	115 aa		6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	IGHV3OR16-9	A0A0B4J2B5	98 aa		6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	RPL32	P62910	135 aa	Known RBP	6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	RNF151	Q2KHN1	245 aa		6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	KRTAP11-1	Q8IUC1	163 aa		6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	SMIM2	Q9BVW6	85 aa		6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	MRPL35	Q9NZE8	188 aa	Known RBP	6.42	□□□□□ -1.38
LSM4-205	ENST00000597776	LINC00862	A6NCI5	91 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	IFITM10	A6NMD0	228 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776		D6R8Y8	96 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	TCAP	O15273	167 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	NPY	P01303	97 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	SRSF3	P84103	164 aa	Known RBP	6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	MRPL54	Q6P161	138 aa	Known RBP	6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	UNQ6190/PRO20217	Q6UXQ8	127 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	SPANXA1	Q9NS26	97 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776	NAT8	Q9UHE5	227 aa		6.41	□□□□□ -1.38
LSM4-205	ENST00000597776		A0A087WZ39	114 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	NDUFA1	O15239	70 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	IGLV7-43	P04211	117 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	HBB	P68871	147 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	MRPS36	P82909	103 aa	Known RBP	6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	PRR26	Q8N8Z3	221 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776	C6orf48	Q9UBA6	75 aa		6.4	□□□□□ -1.38
LSM4-205	ENST00000597776		A0A1B0GW15	77 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776		A0A1B0GXF2	115 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776	GAGE2E	Q4V326	116 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776	DIRC1	Q969H9	104 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776	IMMP2L	Q96T52	175 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776	GAGE2D	Q9UEU5	116 aa		6.39	□□□□□ -1.39
LSM4-205	ENST00000597776		A0A1B0GVG6	124 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776		F8W036	122 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776		F8WDY8	70 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776	TLX1NB	P0CAT3	122 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776	KRTAP7-1	Q8IUC3	87 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776	SMDT1	Q9H4I9	107 aa		6.38	□□□□□ -1.39
LSM4-205	ENST00000597776	TGIF2-C20orf24	A0A0A6YYL0	155 aa		6.37	□□□□□ -1.39
LSM4-205	ENST00000597776		H0Y9J4	135 aa		6.37	□□□□□ -1.39
LSM4-205	ENST00000597776	KIAA0087	Q14695	138 aa		6.37	□□□□□ -1.39
LSM4-205	ENST00000597776	IGLV4-3	A0A075B6K6	122 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776		M0QXV9	152 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	PPBP	P02775	128 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	S100A8	P05109	93 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	IFI27	P40305	119 aa	Predicted RBP	6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	PEA15	Q15121	130 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	LINC00242	Q5T6M2	205 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	C2orf82	Q6UX34	121 aa		6.36	□□□□□ -1.39
LSM4-205	ENST00000597776	RAB5A	P20339	215 aa		6.35	□□□□□ -1.39
LSM4-205	ENST00000597776	ZC2HC1B	Q5TFG8	222 aa		6.35	□□□□□ -1.39
LSM4-205	ENST00000597776	ORMDL3	Q8N138	153 aa		6.35	□□□□□ -1.39
LSM4-205	ENST00000597776	PRELID3A	Q96N28	172 aa		6.35	□□□□□ -1.39
LSM4-205	ENST00000597776	LOC389332	A0A1B0GUA5	103 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	KRTAP1-4	P0C5Y4	121 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	UBE2B	P63146	152 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	C9orf129	Q5T035	196 aa	Known RBP	6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	TMEM136	Q6ZRR5	245 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	TMEM141	Q96I45	108 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	PYGO1	Q9Y3Y4	419 aa		6.34	□□□□□ -1.39
LSM4-205	ENST00000597776	TRBV30	A0A0K0K1B3	111 aa		6.33	□□□□□ -1.4
LSM4-205	ENST00000597776	NDUFC2-KCTD14	E9PQ53	114 aa		6.33	□□□□□ -1.4
LSM4-205	ENST00000597776	UBE2D1	P51668	147 aa		6.33	□□□□□ -1.4
LSM4-205	ENST00000597776	IGLV1-50	A0A075B6I6	118 aa		6.32	□□□□□ -1.4
LSM4-205	ENST00000597776	TEX43	Q6ZNM6	134 aa		6.32	□□□□□ -1.4
LSM4-205	ENST00000597776	LINC00173	Q6ZV60	143 aa		6.32	□□□□□ -1.4
LSM4-205	ENST00000597776	ATP5L2	Q7Z4Y8	100 aa		6.32	□□□□□ -1.4
LSM4-205	ENST00000597776	PACRG	Q96M98	296 aa	Predicted RBP	6.32	□□□□□ -1.4
LSM4-205	ENST00000597776	LINC00469	Q8N7U9	141 aa		6.31	□□□□□ -1.4
LSM4-205	ENST00000597776	C2orf88	Q9BSF0	95 aa		6.31	□□□□□ -1.4
LSM4-205	ENST00000597776	MAP1LC3A	Q9H492	121 aa		6.31	□□□□□ -1.4
LSM4-205	ENST00000597776	TOMM7	Q9P0U1	55 aa		6.31	□□□□□ -1.4
LSM4-205	ENST00000597776	CYSLTR1	Q9Y271	337 aa		6.31	□□□□□ -1.4
LSM4-205	ENST00000597776	C2orf66	Q6UXQ4	117 aa		6.3	□□□□□ -1.4
LSM4-205	ENST00000597776		Q6ZN92	141 aa		6.3	□□□□□ -1.4
LSM4-205	ENST00000597776	LINC01561	Q8N1V8	128 aa		6.3	□□□□□ -1.4
LSM4-205	ENST00000597776	PRSS47	A8MTI9	375 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	PRSS2	P07478	247 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	CKS1B	P61024	79 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	PRR4	Q16378	134 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776		Q8N8P6	123 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	AMELX	Q99217	191 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	VCX2	Q9H322	139 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	XAGE1A	Q9HD64	81 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	LAMTOR2	Q9Y2Q5	125 aa		6.29	□□□□□ -1.4
LSM4-205	ENST00000597776	ALKBH7	Q9BT30	221 aa	Predicted RBP	6.28	□□□□□ -1.4
LSM4-205	ENST00000597776	C22orf24	Q9Y442	160 aa		6.28	□□□□□ -1.4
LSM4-205	ENST00000597776	IGIP	A6NJ69	53 aa		6.27	□□□□□ -1.41
LSM4-205	ENST00000597776	ZNF861P	O60384	105 aa		6.27	□□□□□ -1.41
LSM4-205	ENST00000597776	RPL13A	P40429	203 aa	Known RBP	6.27	□□□□□ -1.41
LSM4-205	ENST00000597776	C6orf226	Q5I0X4	101 aa		6.27	□□□□□ -1.41
LSM4-205	ENST00000597776		Q8IZM0	81 aa		6.27	□□□□□ -1.41
LSM4-205	ENST00000597776	CDKN2A-AS1	Q9UH64	79 aa		6.27	□□□□□ -1.41
LSM4-205	ENST00000597776	ORMDL2	Q53FV1	153 aa		6.26	□□□□□ -1.41
LSM4-205	ENST00000597776	MUC2	Q02817	5179 aa		6.25	□□□□□ -1.41
LSM4-205	ENST00000597776	MT-ND4L	P03901	98 aa		6.25	□□□□□ -1.41
LSM4-205	ENST00000597776	FAM19A3	Q7Z5A8	133 aa		6.25	□□□□□ -1.41
LSM4-205	ENST00000597776	CTDSP1	Q9GZU7	261 aa		6.25	□□□□□ -1.41
LSM4-205	ENST00000597776	CARHSP1	Q9Y2V2	147 aa	Known RBP	6.25	□□□□□ -1.41
LSM4-205	ENST00000597776		F8VRH5	84 aa		6.24	□□□□□ -1.41

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