RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
IRF3-218ENST00000597369 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
IRF3-218ENST00000597369 ZNF664Q8N3J9 261 aa8.42□□□□□ -1.06
IRF3-218ENST00000597369 TMEM141Q96I45 108 aa8.42□□□□□ -1.06
IRF3-218ENST00000597369 PRADC1Q9BSG0 188 aa8.42□□□□□ -1.06
IRF3-218ENST00000597369 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
IRF3-218ENST00000597369 COTL1Q14019 142 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 ODF1Q14990 250 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 C20orf203Q8NBC4 194 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 LINC01600Q96MT4 127 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 PAM16Q9Y3D7 125 aa8.41□□□□□ -1.06
IRF3-218ENST00000597369 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GAGE12JA6NER3 117 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GYPEP15421 78 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 UBE2D3P61077 147 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 UBE2D2P62837 147 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GAGE1Q13065 139 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GAGE4Q13068 117 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GAGE5Q13069 117 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 GAGE13Q4V321 117 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 SPATA45Q537H7 98 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 Q9UF83 564 aa8.4□□□□□ -1.06
IRF3-218ENST00000597369 A0A087WX48 190 aa8.39□□□□□ -1.07
IRF3-218ENST00000597369 IGIPA6NJ69 53 aa8.39□□□□□ -1.07
IRF3-218ENST00000597369 BAALCQ8WXS3 180 aa8.39□□□□□ -1.07
IRF3-218ENST00000597369 LECT2O14960 151 aa8.38□□□□□ -1.07
IRF3-218ENST00000597369 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
IRF3-218ENST00000597369 CHCHD7Q9BUK0 85 aa8.38□□□□□ -1.07
IRF3-218ENST00000597369 DPM2O94777 84 aa8.37□□□□□ -1.07
IRF3-218ENST00000597369 NPSP0C0P6 89 aa8.37□□□□□ -1.07
IRF3-218ENST00000597369 TIRAPP58753 221 aa8.37□□□□□ -1.07
IRF3-218ENST00000597369 SPANXA1Q9NS26 97 aa8.37□□□□□ -1.07
IRF3-218ENST00000597369 CHTOPQ9Y3Y2 248 aaKnown RBP8.37□□□□□ -1.07
IRF3-218ENST00000597369 LOC100131303A0A0U1RQF7 123 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 hDV102S1A0JD36 115 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 F8VRH5 84 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 IGKCP01834 107 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 PAPPA-AS1Q5QFB9 102 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 GTSF1LQ9H1H1 148 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
IRF3-218ENST00000597369 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 PLNP26678 52 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 KRTAP10-8P60410 259 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 SMAGPQ0VAQ4 97 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 PMVKQ15126 192 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 TMEM97Q5BJF2 176 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
IRF3-218ENST00000597369 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
IRF3-218ENST00000597369 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.34□□□□□ -1.07
IRF3-218ENST00000597369 IGKV2-29A2NJV5 120 aaPredicted RBP8.34□□□□□ -1.07
IRF3-218ENST00000597369 DDTP30046 118 aa8.34□□□□□ -1.07
IRF3-218ENST00000597369 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
IRF3-218ENST00000597369 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
IRF3-218ENST00000597369 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 SH2D6Q7Z4S9 175 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 TMEM243Q9BU79 118 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 VCX2Q9H322 139 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 FSIP2Q5CZC0 6907 aa8.33□□□□□ -1.08
IRF3-218ENST00000597369 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 H7C423 109 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 UBE2L6O14933 153 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 IGLC3P0DOY3 106 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 DGAT2L7PQ6IED9 249 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 ATP6V0E2Q8NHE4 81 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 COX11Q9Y6N1 276 aa8.32□□□□□ -1.08
IRF3-218ENST00000597369 TRAV8-6A0A0B4J262 113 aa8.31□□□□□ -1.08
IRF3-218ENST00000597369 A0A0J9YXV3 536 aa8.31□□□□□ -1.08
IRF3-218ENST00000597369 MRPS36P82909 103 aaKnown RBP8.31□□□□□ -1.08
IRF3-218ENST00000597369 NTM-AS1Q6ZSK4 140 aa8.31□□□□□ -1.08
IRF3-218ENST00000597369 STPG4Q8N801 248 aa8.31□□□□□ -1.08
IRF3-218ENST00000597369 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
IRF3-218ENST00000597369 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 LINC00587B1AMM8 73 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 IGHV3-33P01772 117 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 IGHV3-30-3P0DP02 117 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 FGF6P10767 208 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 ANKRD39Q53RE8 183 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 MRPL52Q86TS9 123 aaKnown RBP8.3□□□□□ -1.08
IRF3-218ENST00000597369 C14orf144Q96I85 54 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 AMELXQ99217 191 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 C2orf88Q9BSF0 95 aa8.3□□□□□ -1.08
IRF3-218ENST00000597369 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
IRF3-218ENST00000597369 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
IRF3-218ENST00000597369 OR5A1Q8NGJ0 315 aa8.29□□□□□ -1.08
IRF3-218ENST00000597369 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
IRF3-218ENST00000597369 CSDC2Q9Y534 153 aaKnown RBP8.29□□□□□ -1.08
IRF3-218ENST00000597369 COX8AP10176 69 aa8.28□□□□□ -1.08
IRF3-218ENST00000597369 SLC25A34Q6PIV7 304 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms