RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 CDC42SE2Q9NRR3 84 aa4.13□□□□□ -1.75
LINC00343-204ENST00000596398 C6orf48Q9UBA6 75 aa4.13□□□□□ -1.75
LINC00343-204ENST00000596398 FAM229BQ4G0N7 80 aa4.12□□□□□ -1.75
LINC00343-204ENST00000596398 TRIQKQ629K1 86 aa4.12□□□□□ -1.75
LINC00343-204ENST00000596398 C3orf22Q8N5N4 141 aa4.12□□□□□ -1.75
LINC00343-204ENST00000596398 HIST1H2BAQ96A08 127 aa4.12□□□□□ -1.75
LINC00343-204ENST00000596398 RPL39LQ96EH5 51 aaKnown RBP4.12□□□□□ -1.75
LINC00343-204ENST00000596398 IGLV8-61A0A075B6I0 122 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 FAM74A7A6NL05 159 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 CENPXA8MT69 81 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 NDUFA1O15239 70 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 BCE1O60756 84 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 NCR2O95944 276 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 VPREB1P12018 145 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 CTAG1AP78358 180 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 RNASE13Q5GAN3 156 aaKnown RBP4.11□□□□□ -1.75
LINC00343-204ENST00000596398 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 NUDT15Q9NV35 164 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 UBE2D4Q9Y2X8 147 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 C22orf24Q9Y442 160 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 ALG5Q9Y673 324 aa4.11□□□□□ -1.75
LINC00343-204ENST00000596398 C1orf196B1AJZ1 125 aa4.1□□□□□ -1.75
LINC00343-204ENST00000596398 F8WDY8 70 aa4.1□□□□□ -1.75
LINC00343-204ENST00000596398 CTRLP40313 264 aa4.1□□□□□ -1.75
LINC00343-204ENST00000596398 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
LINC00343-204ENST00000596398 ORAOV1Q8WV07 137 aa4.1□□□□□ -1.75
LINC00343-204ENST00000596398 TRAV13-1A0A0B4J241 112 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 A0A1B0GVG6 124 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 INMT-MINDY4F8WBC2 141 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 IGLC6P0CF74 106 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 ATP6V0CP27449 155 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 ZNF726P1Q15940 193 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 TMEM241Q24JQ0 296 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 CNPY1Q3B7I2 92 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 OR10D4PQ8NGN7 298 aa4.09□□□□□ -1.75
LINC00343-204ENST00000596398 ACTR3CQ9C0K3 210 aaPredicted RBP4.09□□□□□ -1.75
LINC00343-204ENST00000596398 XKRY2A2RUG3 117 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 SDHAF1A6NFY7 115 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 CCDC160A6NGH7 325 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 PLA2G10O15496 165 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 S100A5P33763 92 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 AKR1C3P42330 323 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 LINC00469Q8N7U9 141 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 DAND5Q8N907 189 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 PPP1R1CQ8WVI7 109 aa4.08□□□□□ -1.76
LINC00343-204ENST00000596398 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 NDUFC2-KCTD14E9PQ53 114 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 VCYO14598 125 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 PMCHP20382 165 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 MRPL52Q86TS9 123 aaKnown RBP4.07□□□□□ -1.76
LINC00343-204ENST00000596398 MRAP2Q96G30 205 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 NKX6-2Q9C056 277 aaPredicted RBP4.07□□□□□ -1.76
LINC00343-204ENST00000596398 RNASE7Q9H1E1 156 aaKnown RBP4.07□□□□□ -1.76
LINC00343-204ENST00000596398 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
LINC00343-204ENST00000596398 NEBP20929 6669 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 I3L3M4 83 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 LYRM1O43325 122 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 MPC2O95563 127 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 TRGC1P0CF51 173 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 IL7P13232 177 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 UBE2AP49459 152 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 H2BFSP57053 126 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 C2orf82Q6UX34 121 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 BAGE2Q86Y30 109 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 STOML3Q8TAV4 291 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 MARVELD1Q9BSK0 173 aa4.06□□□□□ -1.76
LINC00343-204ENST00000596398 MBP02144 154 aa4.05□□□□□ -1.76
LINC00343-204ENST00000596398 FOXA3P55318 350 aaPredicted RBP4.05□□□□□ -1.76
LINC00343-204ENST00000596398 MRPL55Q7Z7F7 128 aaKnown RBP4.05□□□□□ -1.76
LINC00343-204ENST00000596398 PSMG3Q9BT73 122 aaPredicted RBP4.05□□□□□ -1.76
LINC00343-204ENST00000596398 XAGE1AQ9HD64 81 aa4.05□□□□□ -1.76
LINC00343-204ENST00000596398 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
LINC00343-204ENST00000596398 SERF2P84101 59 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 Q6ZUT4 128 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 PACRGQ96M98 296 aaPredicted RBP4.04□□□□□ -1.76
LINC00343-204ENST00000596398 LINC00167Q96N53 147 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 CYTL1Q9NRR1 136 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 TNFSF18Q9UNG2 199 aa4.04□□□□□ -1.76
LINC00343-204ENST00000596398 IGHV3OR16-9A0A0B4J2B5 98 aa4.03□□□□□ -1.76
LINC00343-204ENST00000596398 CTXND1A0A1B0GTU2 59 aa4.03□□□□□ -1.76
LINC00343-204ENST00000596398 Q8NBF4 154 aa4.03□□□□□ -1.76
LINC00343-204ENST00000596398 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
LINC00343-204ENST00000596398 TRBV30A0A0K0K1B3 111 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 C7orf77A4D0Y5 90 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 F2Z2F3 143 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 UPK1BO75841 260 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 PRLHP81277 87 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 VCX2Q9H322 139 aa4.02□□□□□ -1.77
LINC00343-204ENST00000596398 ZNF727A8MUV8 499 aa4.01□□□□□ -1.77
LINC00343-204ENST00000596398 S100A9P06702 114 aaKnown RBP4.01□□□□□ -1.77
LINC00343-204ENST00000596398 PET100P0DJ07 73 aa4.01□□□□□ -1.77
LINC00343-204ENST00000596398 FHITP49789 147 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms