RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 AMELXQ99217 191 aa9.13□□□□□ -0.95
SOX2-OT-225ENST00000596250 BIRC6Q9NR09 4857 aa9.13□□□□□ -0.95
SOX2-OT-225ENST00000596250 MALP21145 153 aa9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 XCL1P47992 114 aa9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 LINC00310P59036 64 aa9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 SNRPEP62304 92 aaKnown RBP9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 HERVK_113P63121 156 aa9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 CHCHD10Q8WYQ3 142 aaPredicted RBP9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 TMA7Q9Y2S6 64 aaKnown RBP9.12□□□□□ -0.95
SOX2-OT-225ENST00000596250 PKD1P98161 4303 aa9.11□□□□□ -0.95
SOX2-OT-225ENST00000596250 APOMO95445 188 aa9.11□□□□□ -0.95
SOX2-OT-225ENST00000596250 CD164L2Q6UWJ8 174 aa9.11□□□□□ -0.95
SOX2-OT-225ENST00000596250 CST9LQ9H4G1 147 aa9.11□□□□□ -0.95
SOX2-OT-225ENST00000596250 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
SOX2-OT-225ENST00000596250 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
SOX2-OT-225ENST00000596250 C20orf202A1L168 122 aa9.1□□□□□ -0.95
SOX2-OT-225ENST00000596250 GAGE12HA6NDE8 117 aa9.1□□□□□ -0.95
SOX2-OT-225ENST00000596250 AKR1D1P51857 326 aa9.1□□□□□ -0.95
SOX2-OT-225ENST00000596250 H3BRM9 83 aa9.09□□□□□ -0.95
SOX2-OT-225ENST00000596250 UBE2D1P51668 147 aa9.09□□□□□ -0.95
SOX2-OT-225ENST00000596250 C14orf177Q52M58 125 aa9.09□□□□□ -0.95
SOX2-OT-225ENST00000596250 TINCRA0A1B0GVN0 87 aa9.08□□□□□ -0.96
SOX2-OT-225ENST00000596250 COX7A2LO14548 114 aa9.08□□□□□ -0.96
SOX2-OT-225ENST00000596250 ZC2HC1BQ5TFG8 222 aa9.08□□□□□ -0.96
SOX2-OT-225ENST00000596250 HIST3H2BBQ8N257 126 aa9.08□□□□□ -0.96
SOX2-OT-225ENST00000596250 C5orf52A6NGY3 159 aa9.07□□□□□ -0.96
SOX2-OT-225ENST00000596250 F8VRH5 84 aa9.07□□□□□ -0.96
SOX2-OT-225ENST00000596250 KRTDAPP60985 99 aa9.07□□□□□ -0.96
SOX2-OT-225ENST00000596250 PET117Q6UWS5 81 aa9.07□□□□□ -0.96
SOX2-OT-225ENST00000596250 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 A0A0J9YXV3 536 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 KRTAP10-2P60368 255 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 LINC00242Q5T6M2 205 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 FAM19A3Q7Z5A8 133 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 LINC00469Q8N7U9 141 aa9.06□□□□□ -0.96
SOX2-OT-225ENST00000596250 A0A087WTM6 91 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 SYS1-DBNDD2H3BUS1 97 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 PLNP26678 52 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 C5orf38Q86SI9 138 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 CHAC1Q9BUX1 264 aa9.05□□□□□ -0.96
SOX2-OT-225ENST00000596250 IGHV1-58A0A0C4DH39 117 aa9.04□□□□□ -0.96
SOX2-OT-225ENST00000596250 LRCOL1A6NCL2 159 aa9.04□□□□□ -0.96
SOX2-OT-225ENST00000596250 ZNF561-AS1K7EIQ3 104 aa9.04□□□□□ -0.96
SOX2-OT-225ENST00000596250 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
SOX2-OT-225ENST00000596250 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 TMEM238LA0A1B0GVL6 79 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 DPM2O94777 84 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 PRSS2P07478 247 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 IGLC3P0DOY3 106 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 FOXI1Q12951 378 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 LINC01561Q8N1V8 128 aa9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 MRPL35Q9NZE8 188 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-225ENST00000596250 A0A087WZ39 114 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 IGKCP01834 107 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 FUSP35637 526 aaKnown RBP eCLIP9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 HERVK_113P61574 105 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 ODF1Q14990 250 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 MAPKAPK5-AS1Q8N8E1 139 aa9.02□□□□□ -0.97
SOX2-OT-225ENST00000596250 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 USP17L23D6RBM5 183 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 COX6A2Q02221 97 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 WFDC2Q14508 124 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
SOX2-OT-225ENST00000596250 OR10D4PQ8NGN7 298 aa9□□□□□ -0.97
SOX2-OT-225ENST00000596250 ORAOV1Q8WV07 137 aa9□□□□□ -0.97
SOX2-OT-225ENST00000596250 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 LECT2O14960 151 aa8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 SCGB1D1O95968 90 aa8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 LINC01545Q5VT33 79 aa8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 TOMM7Q9P0U1 55 aa8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-225ENST00000596250 IGLV4-69A0A075B6H9 119 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 IGHV3-64A0A075B6Q5 118 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 IGLV5-45A0A087WSX0 123 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 HSBP1L1C9JCN9 74 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 CKS1BP61024 79 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 LCE2CQ5TA81 110 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 KRTAP26-1Q6PEX3 210 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 Q8N814 137 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 PMCHL2Q9BQD1 86 aa8.98□□□□□ -0.97
SOX2-OT-225ENST00000596250 F8WDY8 70 aa8.97□□□□□ -0.97
SOX2-OT-225ENST00000596250 SPINK8P0C7L1 97 aa8.97□□□□□ -0.97
SOX2-OT-225ENST00000596250 ZNF22P17026 224 aaPredicted RBP8.97□□□□□ -0.97
SOX2-OT-225ENST00000596250 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
SOX2-OT-225ENST00000596250 HIGD2BQ4VC39 106 aa8.97□□□□□ -0.97
SOX2-OT-225ENST00000596250 CXCL5P42830 114 aa8.96□□□□□ -0.98
SOX2-OT-225ENST00000596250 CDPF1Q6NVV7 123 aa8.96□□□□□ -0.98
SOX2-OT-225ENST00000596250 NTN5Q8WTR8 489 aaPredicted RBP8.96□□□□□ -0.98
SOX2-OT-225ENST00000596250 CAMK2N2Q96S95 79 aa8.96□□□□□ -0.98
SOX2-OT-225ENST00000596250 PKIGQ9Y2B9 76 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms