RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NSUN5P1Q3KNT7 163 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
PNKP-204ENST00000594661 FN1P02751 2386 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1BA6NDE4 496 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1EA6NEQ0 496 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 F8WDY8 70 aa11.14□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1DP0C7P1 496 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 RPL39P62891 51 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 POLR2KP53803 58 aaKnown RBP11.14□□□□□ -0.63
PNKP-204ENST00000594661 A8MTW9 85 aa11.13□□□□□ -0.63
PNKP-204ENST00000594661 F5H697 171 aa11.13□□□□□ -0.63
PNKP-204ENST00000594661 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
PNKP-204ENST00000594661 DAND5Q8N907 189 aa11.13□□□□□ -0.63
PNKP-204ENST00000594661 SUMO4Q6EEV6 95 aa11.12□□□□□ -0.63
PNKP-204ENST00000594661 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
PNKP-204ENST00000594661 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
PNKP-204ENST00000594661 ODF3L2Q3SX64 289 aa11.12□□□□□ -0.63
PNKP-204ENST00000594661 FAM74A4Q5TZK3 123 aa11.12□□□□□ -0.63
PNKP-204ENST00000594661 RHOHQ15669 191 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 SERP2Q8N6R1 65 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 VCYO14598 125 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 MALP21145 153 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 MIAQ16674 131 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
PNKP-204ENST00000594661 HTN1P15515 57 aa11.09□□□□□ -0.63
PNKP-204ENST00000594661 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
PNKP-204ENST00000594661 PRO0628Q9UI54 55 aa11.09□□□□□ -0.63
PNKP-204ENST00000594661 C2CD3Q4AC94 2353 aa11.09□□□□□ -0.63
PNKP-204ENST00000594661 PRSS2P07478 247 aa11.08□□□□□ -0.64
PNKP-204ENST00000594661 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
PNKP-204ENST00000594661 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
PNKP-204ENST00000594661 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
PNKP-204ENST00000594661 IGHV3-30-3P0DP02 117 aa11.06□□□□□ -0.64
PNKP-204ENST00000594661 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
PNKP-204ENST00000594661 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
PNKP-204ENST00000594661 DEFB104AQ8WTQ1 72 aa11.06□□□□□ -0.64
PNKP-204ENST00000594661 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
PNKP-204ENST00000594661 FLNBO75369 2602 aaKnown RBP11.06□□□□□ -0.64
PNKP-204ENST00000594661 COX7A2LO14548 114 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 IGLV1-51P01701 117 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 PRM2P04554 102 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 TRBV6-5A0A0K0K1A5 114 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 M0QY20 66 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 INAFM2P0DMQ5 153 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 TIRAPP58753 221 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 BEAN1Q3B7T3 259 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 C22orf24Q9Y442 160 aa11.05□□□□□ -0.64
PNKP-204ENST00000594661 NDUFC2-KCTD14E9PQ53 114 aa11.04□□□□□ -0.64
PNKP-204ENST00000594661 A0A0J9YXV3 536 aa11.03□□□□□ -0.64
PNKP-204ENST00000594661 STHQ8IWL8 128 aa11.03□□□□□ -0.64
PNKP-204ENST00000594661 TIMM17BO60830 172 aa11.03□□□□□ -0.64
PNKP-204ENST00000594661 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
PNKP-204ENST00000594661 PF4P02776 101 aa11.02□□□□□ -0.64
PNKP-204ENST00000594661 Q6JHZ5 121 aa11.02□□□□□ -0.65
PNKP-204ENST00000594661 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.65
PNKP-204ENST00000594661 WFDC10AQ9H1F0 79 aa11.02□□□□□ -0.65
PNKP-204ENST00000594661 TENM1Q9UKZ4 2725 aa11.01□□□□□ -0.65
PNKP-204ENST00000594661 EPM2AB3EWF7 344 aa11.01□□□□□ -0.65
PNKP-204ENST00000594661 INSP01308 110 aa11.01□□□□□ -0.65
PNKP-204ENST00000594661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.01□□□□□ -0.65
PNKP-204ENST00000594661 XCL2Q9UBD3 114 aa11.01□□□□□ -0.65
PNKP-204ENST00000594661 NDUFA12Q9UI09 145 aa11.01□□□□□ -0.65
PNKP-204ENST00000594661 PFN2P35080 140 aa11□□□□□ -0.65
PNKP-204ENST00000594661 JMJD1CQ15652 2540 aa11□□□□□ -0.65
PNKP-204ENST00000594661 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
PNKP-204ENST00000594661 IGHV1-58A0A0C4DH39 117 aa11□□□□□ -0.65
PNKP-204ENST00000594661 BAALC-AS2P0C853 105 aa11□□□□□ -0.65
PNKP-204ENST00000594661 ZNF415Q09FC8 603 aa11□□□□□ -0.65
PNKP-204ENST00000594661 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
PNKP-204ENST00000594661 VWFP04275 2813 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 F8P00451 2351 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 IGLV4-3A0A075B6K6 122 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 NDUFC2O95298 119 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
PNKP-204ENST00000594661 MRPS36P82909 103 aaKnown RBP10.98□□□□□ -0.65
PNKP-204ENST00000594661 C20orf203Q8NBC4 194 aa10.98□□□□□ -0.65
PNKP-204ENST00000594661 USP17L23D6RBM5 183 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 NPC2P61916 151 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 LINC00336Q6ZUF6 198 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 LINC00467Q9BRT7 94 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 C1orf158Q8N1D5 194 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 LINC01561Q8N1V8 128 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 C11orf72Q8NBR9 251 aa10.97□□□□□ -0.65
PNKP-204ENST00000594661 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
PNKP-204ENST00000594661 VSIG2Q96IQ7 327 aa10.96□□□□□ -0.65
PNKP-204ENST00000594661 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.66
PNKP-204ENST00000594661 FHL2Q14192 279 aa10.96□□□□□ -0.66
PNKP-204ENST00000594661 NACAE9PAV3 2078 aa10.95□□□□□ -0.66
PNKP-204ENST00000594661 GIG44P09565 113 aaPredicted RBP10.95□□□□□ -0.66
PNKP-204ENST00000594661 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
PNKP-204ENST00000594661 RPL35AP18077 110 aaKnown RBP10.94□□□□□ -0.66
PNKP-204ENST00000594661 C1orf43Q9BWL3 253 aa10.94□□□□□ -0.66
PNKP-204ENST00000594661 IGKV3D-7A0A0C4DH55 119 aa10.93□□□□□ -0.66
PNKP-204ENST00000594661 ATRQ13535 2644 aa10.93□□□□□ -0.66
PNKP-204ENST00000594661 Q6ZSN1 163 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms