RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 Q5VSD8 79 aa9.35□□□□□ -0.91
VRK3-206ENST00000594090 LINC00173Q6ZV60 143 aa9.35□□□□□ -0.91
VRK3-206ENST00000594090 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
VRK3-206ENST00000594090 LINC00526Q96FQ7 95 aa9.35□□□□□ -0.91
VRK3-206ENST00000594090 C2orf88Q9BSF0 95 aa9.35□□□□□ -0.91
VRK3-206ENST00000594090 IGHV3OR16-9A0A0B4J2B5 98 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 ZNF561-AS1K7EIQ3 104 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 APOMO95445 188 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 FA2HQ7L5A8 372 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 AMELXQ99217 191 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.34□□□□□ -0.91
VRK3-206ENST00000594090 FAT1Q14517 4588 aa9.34□□□□□ -0.91
VRK3-206ENST00000594090 UBE2D1P51668 147 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 ZC2HC1BQ5TFG8 222 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 CBLN2Q8IUK8 224 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 TIMM17AQ99595 171 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 VCX2Q9H322 139 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
VRK3-206ENST00000594090 IGLV4-69A0A075B6H9 119 aa9.32□□□□□ -0.92
VRK3-206ENST00000594090 PANO1I0J062 215 aa9.32□□□□□ -0.92
VRK3-206ENST00000594090 C18orf32Q8TCD1 76 aa9.32□□□□□ -0.92
VRK3-206ENST00000594090 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
VRK3-206ENST00000594090 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 COX6A2Q02221 97 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 ERASQ7Z444 233 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 LINC01549A6NIU2 74 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 SPAG11BQ08648 103 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 CIRBPQ14011 172 aaKnown RBP9.31□□□□□ -0.92
VRK3-206ENST00000594090 PAPPA-AS1Q5QFB9 102 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 OR10D4PQ8NGN7 298 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 SCGB3A1Q96QR1 104 aa9.31□□□□□ -0.92
VRK3-206ENST00000594090 A0A087WZ39 114 aa9.3□□□□□ -0.92
VRK3-206ENST00000594090 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
VRK3-206ENST00000594090 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
VRK3-206ENST00000594090 LINC00614P0C842 121 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 Q6ZRU5 148 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 SPACA4Q8TDM5 124 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 C2orf48Q96LS8 159 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 CAMK2N2Q96S95 79 aa9.29□□□□□ -0.92
VRK3-206ENST00000594090 A0A096LNJ9 63 aa9.27□□□□□ -0.93
VRK3-206ENST00000594090 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
VRK3-206ENST00000594090 A0A096LNI7 61 aa9.26□□□□□ -0.93
VRK3-206ENST00000594090 IGKV2-24A0A0C4DH68 120 aa9.26□□□□□ -0.93
VRK3-206ENST00000594090 RAB5BP61020 215 aa9.26□□□□□ -0.93
VRK3-206ENST00000594090 SEC11AP67812 179 aa9.26□□□□□ -0.93
VRK3-206ENST00000594090 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
VRK3-206ENST00000594090 A0A087WYN8 130 aa9.25□□□□□ -0.93
VRK3-206ENST00000594090 F8WDY8 70 aa9.25□□□□□ -0.93
VRK3-206ENST00000594090 HBDP02042 147 aa9.25□□□□□ -0.93
VRK3-206ENST00000594090 PLA2G1BP04054 148 aaKnown RBP9.25□□□□□ -0.93
VRK3-206ENST00000594090 HERVK_113P63121 156 aa9.25□□□□□ -0.93
VRK3-206ENST00000594090 ABCA13Q86UQ4 5058 aa9.25□□□□□ -0.93
VRK3-206ENST00000594090 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
VRK3-206ENST00000594090 PMCHL1Q16048 86 aa9.24□□□□□ -0.93
VRK3-206ENST00000594090 MAJINQ3KP22 176 aa9.24□□□□□ -0.93
VRK3-206ENST00000594090 DPH3Q96FX2 82 aa9.24□□□□□ -0.93
VRK3-206ENST00000594090 GEMIN7Q9H840 131 aaKnown RBP9.24□□□□□ -0.93
VRK3-206ENST00000594090 LOC107984640A0A0U1RRK4 108 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.23□□□□□ -0.93
VRK3-206ENST00000594090 NDUFA1O15239 70 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 PMVKQ15126 192 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 CST9LQ9H4G1 147 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
VRK3-206ENST00000594090 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 LINC00474Q9P2X8 69 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 CDKN2A-AS1Q9UH64 79 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 PCLOQ9Y6V0 5065 aa9.23□□□□□ -0.93
VRK3-206ENST00000594090 TRGC2P03986 189 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 TINCRA0A1B0GVN0 87 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 PTTG1IPP53801 180 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 RNF151Q2KHN1 245 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 PDZD11Q5EBL8 140 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 C10orf25Q5T742 122 aa9.22□□□□□ -0.93
VRK3-206ENST00000594090 CHCHD1Q96BP2 118 aaKnown RBP9.22□□□□□ -0.93
VRK3-206ENST00000594090 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.94
VRK3-206ENST00000594090 UNQ6190/PRO20217Q6UXQ8 127 aa9.21□□□□□ -0.94
VRK3-206ENST00000594090 LINC00469Q8N7U9 141 aa9.21□□□□□ -0.94
VRK3-206ENST00000594090 STPG4Q8N801 248 aa9.21□□□□□ -0.94
VRK3-206ENST00000594090 PACRGQ96M98 296 aaPredicted RBP9.21□□□□□ -0.94
VRK3-206ENST00000594090 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
VRK3-206ENST00000594090 COLCA2A8K830 154 aa9.2□□□□□ -0.94
VRK3-206ENST00000594090 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
VRK3-206ENST00000594090 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
VRK3-206ENST00000594090 GAGE2BQ13066 116 aa9.2□□□□□ -0.94
VRK3-206ENST00000594090 C6orf48Q9UBA6 75 aa9.2□□□□□ -0.94
VRK3-206ENST00000594090 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
VRK3-206ENST00000594090 ATP5LO75964 103 aa9.19□□□□□ -0.94
VRK3-206ENST00000594090 PRSS2P07478 247 aa9.19□□□□□ -0.94
VRK3-206ENST00000594090 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
VRK3-206ENST00000594090 SMIM1B2RUZ4 78 aa9.18□□□□□ -0.94
VRK3-206ENST00000594090 NDUFA6P56556 154 aa9.18□□□□□ -0.94
VRK3-206ENST00000594090 C2orf82Q6UX34 121 aa9.18□□□□□ -0.94
VRK3-206ENST00000594090 Q8IZM0 81 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms