RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 NDUFA1O15239 70 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 TLX1NBP0CAT3 122 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
LIG1-205ENST00000593425 KRTAP7-1Q8IUC3 87 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 IMMP2LQ96T52 175 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 C20orf78Q9BR46 151 aa9.88□□□□□ -0.83
LIG1-205ENST00000593425 LINC00862A6NCI5 91 aa9.87□□□□□ -0.83
LIG1-205ENST00000593425 F8WDY8 70 aa9.87□□□□□ -0.83
LIG1-205ENST00000593425 RPL23P62829 140 aaKnown RBP9.87□□□□□ -0.83
LIG1-205ENST00000593425 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
LIG1-205ENST00000593425 FAM74A3Q4VXF1 159 aa9.87□□□□□ -0.83
LIG1-205ENST00000593425 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 KRTAP1-4P0C5Y4 121 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 CKS2P33552 79 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 GAGE2EQ4V326 116 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 GAGE2DQ9UEU5 116 aa9.86□□□□□ -0.83
LIG1-205ENST00000593425 SMIM27A0A1W2PRY6 76 aa9.85□□□□□ -0.83
LIG1-205ENST00000593425 IFITM10A6NMD0 228 aa9.85□□□□□ -0.83
LIG1-205ENST00000593425 MRPS36P82909 103 aaKnown RBP9.85□□□□□ -0.83
LIG1-205ENST00000593425 AKAP14Q86UN6 197 aa9.85□□□□□ -0.83
LIG1-205ENST00000593425 SMDT1Q9H4I9 107 aa9.85□□□□□ -0.83
LIG1-205ENST00000593425 D6R8Y8 96 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 TCAPO15273 167 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 NPYP01303 97 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 HBBP68871 147 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 ADIRFQ15847 76 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 TMEM241Q24JQ0 296 aa9.84□□□□□ -0.83
LIG1-205ENST00000593425 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
LIG1-205ENST00000593425 M0QXV9 152 aa9.83□□□□□ -0.84
LIG1-205ENST00000593425 KIAA0087Q14695 138 aa9.83□□□□□ -0.84
LIG1-205ENST00000593425 TGIF2-C20orf24A0A0A6YYL0 155 aa9.81□□□□□ -0.84
LIG1-205ENST00000593425 A0A1B0GW15 77 aa9.81□□□□□ -0.84
LIG1-205ENST00000593425 C9JQL5 133 aa9.81□□□□□ -0.84
LIG1-205ENST00000593425 UBE2BP63146 152 aa9.81□□□□□ -0.84
LIG1-205ENST00000593425 MRPL54Q6P161 138 aaKnown RBP9.81□□□□□ -0.84
LIG1-205ENST00000593425 hCG_2014768A0A024R1R8 64 aa9.8□□□□□ -0.84
LIG1-205ENST00000593425 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
LIG1-205ENST00000593425 NAT8Q9UHE5 227 aa9.8□□□□□ -0.84
LIG1-205ENST00000593425 A0A1B0GXF2 115 aa9.79□□□□□ -0.84
LIG1-205ENST00000593425 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
LIG1-205ENST00000593425 LINC00242Q5T6M2 205 aa9.79□□□□□ -0.84
LIG1-205ENST00000593425 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
LIG1-205ENST00000593425 TRBV30A0A0K0K1B3 111 aa9.78□□□□□ -0.84
LIG1-205ENST00000593425 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
LIG1-205ENST00000593425 UBE2D1P51668 147 aa9.78□□□□□ -0.84
LIG1-205ENST00000593425 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
LIG1-205ENST00000593425 F8W036 122 aa9.77□□□□□ -0.85
LIG1-205ENST00000593425 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
LIG1-205ENST00000593425 PRR4Q16378 134 aa9.77□□□□□ -0.85
LIG1-205ENST00000593425 S100A8P05109 93 aa9.76□□□□□ -0.85
LIG1-205ENST00000593425 PYGO1Q9Y3Y4 419 aa9.76□□□□□ -0.85
LIG1-205ENST00000593425 PPBPP02775 128 aa9.75□□□□□ -0.85
LIG1-205ENST00000593425 TMEM141Q96I45 108 aa9.75□□□□□ -0.85
LIG1-205ENST00000593425 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
LIG1-205ENST00000593425 RAB5AP20339 215 aa9.74□□□□□ -0.85
LIG1-205ENST00000593425 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
LIG1-205ENST00000593425 ZC2HC1BQ5TFG8 222 aa9.74□□□□□ -0.85
LIG1-205ENST00000593425 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
LIG1-205ENST00000593425 MUC2Q02817 5179 aa9.74□□□□□ -0.85
LIG1-205ENST00000593425 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
LIG1-205ENST00000593425 PRELID3AQ96N28 172 aa9.73□□□□□ -0.85
LIG1-205ENST00000593425 ZNF861PO60384 105 aa9.72□□□□□ -0.85
LIG1-205ENST00000593425 TEX43Q6ZNM6 134 aa9.72□□□□□ -0.85
LIG1-205ENST00000593425 LINC00173Q6ZV60 143 aa9.72□□□□□ -0.85
LIG1-205ENST00000593425 LINC01561Q8N1V8 128 aa9.71□□□□□ -0.86
LIG1-205ENST00000593425 LINC00469Q8N7U9 141 aa9.71□□□□□ -0.86
LIG1-205ENST00000593425 CARHSP1Q9Y2V2 147 aaKnown RBP9.71□□□□□ -0.86
LIG1-205ENST00000593425 LOC389332A0A1B0GUA5 103 aa9.7□□□□□ -0.86
LIG1-205ENST00000593425 PEA15Q15121 130 aa9.7□□□□□ -0.86
LIG1-205ENST00000593425 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
LIG1-205ENST00000593425 PRSS47A8MTI9 375 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 ATP5L2Q7Z4Y8 100 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 AMELXQ99217 191 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 C2orf88Q9BSF0 95 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 C22orf24Q9Y442 160 aa9.69□□□□□ -0.86
LIG1-205ENST00000593425 NUPR1O60356 82 aa9.68□□□□□ -0.86
LIG1-205ENST00000593425 PRSS2P07478 247 aa9.68□□□□□ -0.86
LIG1-205ENST00000593425 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
LIG1-205ENST00000593425 Q6ZN92 141 aa9.68□□□□□ -0.86
LIG1-205ENST00000593425 TSPAN13O95857 204 aa9.67□□□□□ -0.86
LIG1-205ENST00000593425 CTDSP1Q9GZU7 261 aa9.67□□□□□ -0.86
LIG1-205ENST00000593425 MAP1LC3AQ9H492 121 aa9.67□□□□□ -0.86
LIG1-205ENST00000593425 CYSLTR1Q9Y271 337 aa9.67□□□□□ -0.86
LIG1-205ENST00000593425 A0A087X002 238 aa9.66□□□□□ -0.86
LIG1-205ENST00000593425 CKS1BP61024 79 aa9.66□□□□□ -0.86
LIG1-205ENST00000593425 Q8IZM0 81 aa9.66□□□□□ -0.86
LIG1-205ENST00000593425 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
LIG1-205ENST00000593425 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
LIG1-205ENST00000593425 Q8N8P6 123 aa9.65□□□□□ -0.86
LIG1-205ENST00000593425 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
LIG1-205ENST00000593425 VCX2Q9H322 139 aa9.65□□□□□ -0.86
LIG1-205ENST00000593425 LAMTOR2Q9Y2Q5 125 aa9.65□□□□□ -0.86
LIG1-205ENST00000593425 IGIPA6NJ69 53 aa9.64□□□□□ -0.87
LIG1-205ENST00000593425 LBHQ53QV2 105 aaPredicted RBP9.64□□□□□ -0.87
LIG1-205ENST00000593425 MRPL55Q7Z7F7 128 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms