RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 GVQW2A0A096LPI5 108 aaPredicted RBP9.73□□□□□ -0.85
DDX39A-221ENST00000593026 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
DDX39A-221ENST00000593026 HSBP1O75506 76 aa9.73□□□□□ -0.85
DDX39A-221ENST00000593026 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
DDX39A-221ENST00000593026 PDZD11Q5EBL8 140 aa9.72□□□□□ -0.85
DDX39A-221ENST00000593026 DYNC1H1Q14204 4646 aaKnown RBP9.71□□□□□ -0.85
DDX39A-221ENST00000593026 SERF1AO75920 110 aa9.71□□□□□ -0.86
DDX39A-221ENST00000593026 ATP5LO75964 103 aa9.71□□□□□ -0.86
DDX39A-221ENST00000593026 APOMO95445 188 aa9.71□□□□□ -0.86
DDX39A-221ENST00000593026 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
DDX39A-221ENST00000593026 SEC11AP67812 179 aa9.71□□□□□ -0.86
DDX39A-221ENST00000593026 DNAH5Q8TE73 4624 aa9.71□□□□□ -0.86
DDX39A-221ENST00000593026 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.7□□□□□ -0.86
DDX39A-221ENST00000593026 COX6A2Q02221 97 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 PMVKQ15126 192 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 LINC01620Q4KN68 170 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 CST9LQ9H4G1 147 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 HERC2O95714 4834 aa9.7□□□□□ -0.86
DDX39A-221ENST00000593026 A0A087WZ39 114 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BKO60814 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BJP06899 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BOP23527 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BBP33778 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BDP58876 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 LINC00310P59036 64 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BCP62807 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HERVK_113P63121 156 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST2H2BEQ16778 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.69□□□□□ -0.86
DDX39A-221ENST00000593026 FAM19A2Q8N3H0 131 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BHQ93079 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BNQ99877 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 HIST1H2BMQ99879 126 aa9.69□□□□□ -0.86
DDX39A-221ENST00000593026 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
DDX39A-221ENST00000593026 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
DDX39A-221ENST00000593026 NDUFA6P56556 154 aa9.68□□□□□ -0.86
DDX39A-221ENST00000593026 C9orf163Q8N9P6 203 aa9.68□□□□□ -0.86
DDX39A-221ENST00000593026 OR10D4PQ8NGN7 298 aa9.68□□□□□ -0.86
DDX39A-221ENST00000593026 LINC00526Q96FQ7 95 aa9.68□□□□□ -0.86
DDX39A-221ENST00000593026 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
DDX39A-221ENST00000593026 SLPIP03973 132 aa9.67□□□□□ -0.86
DDX39A-221ENST00000593026 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
DDX39A-221ENST00000593026 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
DDX39A-221ENST00000593026 LRP1BQ9NZR2 4599 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 TINCRA0A1B0GVN0 87 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 LINC01561Q8N1V8 128 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 IFI27L1Q96BM0 104 aa9.66□□□□□ -0.86
DDX39A-221ENST00000593026 NUPR1O60356 82 aa9.65□□□□□ -0.86
DDX39A-221ENST00000593026 LINC00469Q8N7U9 141 aa9.65□□□□□ -0.86
DDX39A-221ENST00000593026 CDKN2A-AS1Q9UH64 79 aa9.65□□□□□ -0.86
DDX39A-221ENST00000593026 KIAA1109Q2LD37 5005 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 LEPROTL1O95214 131 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 PACRGQ96M98 296 aaPredicted RBP9.64□□□□□ -0.87
DDX39A-221ENST00000593026 CAMK2N2Q96S95 79 aa9.64□□□□□ -0.87
DDX39A-221ENST00000593026 Q6ZSA8 131 aa9.63□□□□□ -0.87
DDX39A-221ENST00000593026 FAM30AQ9NZY2 134 aa9.63□□□□□ -0.87
DDX39A-221ENST00000593026 IGLV5-45A0A087WSX0 123 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 IGLC3P0DOY3 106 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 SDIM1Q6ZPB5 146 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 CHAC1Q9BUX1 264 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
DDX39A-221ENST00000593026 TRAV12-1A0A0B4J245 112 aa9.61□□□□□ -0.87
DDX39A-221ENST00000593026 FABP4P15090 132 aa9.61□□□□□ -0.87
DDX39A-221ENST00000593026 Q6ZRU5 148 aa9.61□□□□□ -0.87
DDX39A-221ENST00000593026 CHTOPQ9Y3Y2 248 aaKnown RBP9.61□□□□□ -0.87
DDX39A-221ENST00000593026 F8WDY8 70 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 H3BRM9 83 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 PRSS2P07478 247 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 XGP55808 180 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 PKIGQ9Y2B9 76 aa9.6□□□□□ -0.87
DDX39A-221ENST00000593026 RYR1P21817 5038 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 SMIM1B2RUZ4 78 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 H0Y8G0 127 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 NDUFA1O15239 70 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 HAMPP81172 84 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 KIAA0087Q14695 138 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 Q8IZM0 81 aa9.59□□□□□ -0.87
DDX39A-221ENST00000593026 C11orf86A6NJI1 115 aa9.58□□□□□ -0.88
DDX39A-221ENST00000593026 SPINK8P0C7L1 97 aa9.58□□□□□ -0.88
DDX39A-221ENST00000593026 ZNF22P17026 224 aaPredicted RBP9.58□□□□□ -0.88
DDX39A-221ENST00000593026 COA6Q5JTJ3 125 aaKnown RBP9.58□□□□□ -0.88
DDX39A-221ENST00000593026 PCLOQ9Y6V0 5065 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 F8VRH5 84 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 CKS1BP61024 79 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
DDX39A-221ENST00000593026 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
DDX39A-221ENST00000593026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
DDX39A-221ENST00000593026 APOBP04114 4563 aaKnown RBP9.56□□□□□ -0.88
DDX39A-221ENST00000593026 RNF151Q2KHN1 245 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms