RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
PRKCSH-216ENST00000592445 CT83Q5H943 113 aa11.64□□□□□ -0.55
PRKCSH-216ENST00000592445 IGHV3OR16-9A0A0B4J2B5 98 aa11.63□□□□□ -0.55
PRKCSH-216ENST00000592445 HIGD1CA8MV81 97 aa11.63□□□□□ -0.55
PRKCSH-216ENST00000592445 ZNF861PO60384 105 aa11.61□□□□□ -0.55
PRKCSH-216ENST00000592445 NRACQ8N912 160 aa11.61□□□□□ -0.55
PRKCSH-216ENST00000592445 PPP1R2P9O14990 202 aa11.6□□□□□ -0.55
PRKCSH-216ENST00000592445 CEBPGP53567 150 aa11.58□□□□□ -0.56
PRKCSH-216ENST00000592445 RPL39P62891 51 aaKnown RBP11.58□□□□□ -0.56
PRKCSH-216ENST00000592445 BATF3Q9NR55 127 aa11.58□□□□□ -0.56
PRKCSH-216ENST00000592445 IFITM10A6NMD0 228 aa11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 NDUFC2-KCTD14E9PQ53 114 aa11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 TMEM250H0YL14 139 aa11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 HBBP68871 147 aa11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 RIGQ13278 110 aa11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 C9orf129Q5T035 196 aaKnown RBP11.57□□□□□ -0.56
PRKCSH-216ENST00000592445 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
PRKCSH-216ENST00000592445 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
PRKCSH-216ENST00000592445 TYMSOSQ8TAI1 123 aa11.56□□□□□ -0.56
PRKCSH-216ENST00000592445 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
PRKCSH-216ENST00000592445 PACRGQ96M98 296 aaPredicted RBP11.55□□□□□ -0.56
PRKCSH-216ENST00000592445 SPANXA1Q9NS26 97 aa11.55□□□□□ -0.56
PRKCSH-216ENST00000592445 A0A087X002 238 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 TCAPO15273 167 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 NUPR1O60356 82 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 CRYGAP11844 174 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 KIAA0087Q14695 138 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 C2orf82Q6UX34 121 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 MUC17Q685J3 4493 aa11.54□□□□□ -0.56
PRKCSH-216ENST00000592445 MRPS36P82909 103 aaKnown RBP11.53□□□□□ -0.56
PRKCSH-216ENST00000592445 C20orf78Q9BR46 151 aa11.53□□□□□ -0.56
PRKCSH-216ENST00000592445 MRPL51Q4U2R6 128 aaKnown RBP11.52□□□□□ -0.57
PRKCSH-216ENST00000592445 CTDSP1Q9GZU7 261 aa11.52□□□□□ -0.57
PRKCSH-216ENST00000592445 CDIP1Q9H305 208 aa11.52□□□□□ -0.57
PRKCSH-216ENST00000592445 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
PRKCSH-216ENST00000592445 RETNLBQ9BQ08 111 aa11.51□□□□□ -0.57
PRKCSH-216ENST00000592445 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
PRKCSH-216ENST00000592445 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 SLC51BQ86UW2 128 aa11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 SMIM7Q9BQ49 75 aa11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 OSTCQ9NRP0 149 aa11.5□□□□□ -0.57
PRKCSH-216ENST00000592445 CKS2P33552 79 aa11.49□□□□□ -0.57
PRKCSH-216ENST00000592445 RPL32P62910 135 aaKnown RBP11.49□□□□□ -0.57
PRKCSH-216ENST00000592445 TRBV24-1A0A075B6N3 115 aa11.48□□□□□ -0.57
PRKCSH-216ENST00000592445 LINC00862A6NCI5 91 aa11.48□□□□□ -0.57
PRKCSH-216ENST00000592445 LINC00469Q8N7U9 141 aa11.48□□□□□ -0.57
PRKCSH-216ENST00000592445 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
PRKCSH-216ENST00000592445 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
PRKCSH-216ENST00000592445 SMIM2Q9BVW6 85 aa11.47□□□□□ -0.57
PRKCSH-216ENST00000592445 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
PRKCSH-216ENST00000592445 NAT8BQ9UHF3 227 aa11.46□□□□□ -0.57
PRKCSH-216ENST00000592445 V9GYV3 84 aa11.46□□□□□ -0.57
PRKCSH-216ENST00000592445 BCE1O60756 84 aa11.45□□□□□ -0.58
PRKCSH-216ENST00000592445 PRSS2P07478 247 aa11.45□□□□□ -0.58
PRKCSH-216ENST00000592445 IFI27P40305 119 aaPredicted RBP11.45□□□□□ -0.58
PRKCSH-216ENST00000592445 XAGE1AQ9HD64 81 aa11.45□□□□□ -0.58
PRKCSH-216ENST00000592445 CKS1BP61024 79 aa11.44□□□□□ -0.58
PRKCSH-216ENST00000592445 TPRXLQ17RH7 258 aa11.44□□□□□ -0.58
PRKCSH-216ENST00000592445 ANAPC11Q9NYG5 84 aa11.44□□□□□ -0.58
PRKCSH-216ENST00000592445 BLOC1S1P78537 153 aa11.43□□□□□ -0.58
PRKCSH-216ENST00000592445 TOMM7Q9P0U1 55 aa11.43□□□□□ -0.58
PRKCSH-216ENST00000592445 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-216ENST00000592445 EIF5A2Q9GZV4 153 aaKnown RBP11.42□□□□□ -0.58
PRKCSH-216ENST00000592445 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
PRKCSH-216ENST00000592445 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
PRKCSH-216ENST00000592445 D6R8Y8 96 aa11.41□□□□□ -0.58
PRKCSH-216ENST00000592445 LINC01561Q8N1V8 128 aa11.41□□□□□ -0.58
PRKCSH-216ENST00000592445 LINC00304Q8N9R0 145 aa11.41□□□□□ -0.58
PRKCSH-216ENST00000592445 RAB5AP20339 215 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 FAM74A3Q4VXF1 159 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 KRTAP13-2Q52LG2 175 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 TMEM141Q96I45 108 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 TP73-AS1Q9UF72 201 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 PYGO1Q9Y3Y4 419 aa11.4□□□□□ -0.58
PRKCSH-216ENST00000592445 A0A1B0GW15 77 aa11.39□□□□□ -0.59
PRKCSH-216ENST00000592445 NPYP01303 97 aa11.39□□□□□ -0.59
PRKCSH-216ENST00000592445 TEX43Q6ZNM6 134 aa11.39□□□□□ -0.59
PRKCSH-216ENST00000592445 RPL37AP8A6NKH3 93 aa11.38□□□□□ -0.59
PRKCSH-216ENST00000592445 Q6ZN92 141 aa11.38□□□□□ -0.59
PRKCSH-216ENST00000592445 C2orf88Q9BSF0 95 aa11.38□□□□□ -0.59
PRKCSH-216ENST00000592445 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
PRKCSH-216ENST00000592445 F8W036 122 aa11.36□□□□□ -0.59
PRKCSH-216ENST00000592445 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
PRKCSH-216ENST00000592445 FSIP2Q5CZC0 6907 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 SMIM27A0A1W2PRY6 76 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 UBE2AP49459 152 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 Q8IZM0 81 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 LINC00167Q96N53 147 aa11.35□□□□□ -0.59
PRKCSH-216ENST00000592445 IGKV2D-26A0A0A0MRZ7 120 aa11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 PPBPP02775 128 aa11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 S100A8P05109 93 aa11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 SRP19P09132 144 aaKnown RBP11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 TCTE3Q8IZS6 198 aa11.34□□□□□ -0.59
PRKCSH-216ENST00000592445 GAGE10A6NGK3 116 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms