RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 NPSP0C0P6 89 aa12.05□□□□□ -0.48
TCF3-216ENST00000592395 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
TCF3-216ENST00000592395 SLPIP03973 132 aa12.04□□□□□ -0.48
TCF3-216ENST00000592395 TEX43Q6ZNM6 134 aa12.04□□□□□ -0.48
TCF3-216ENST00000592395 Q8N1X5 172 aa12.04□□□□□ -0.48
TCF3-216ENST00000592395 SMCO4Q9NRQ5 59 aa12.04□□□□□ -0.48
TCF3-216ENST00000592395 IGIPA6NJ69 53 aa12.03□□□□□ -0.48
TCF3-216ENST00000592395 MALP21145 153 aa12.03□□□□□ -0.48
TCF3-216ENST00000592395 Q6ZN92 141 aa12.03□□□□□ -0.48
TCF3-216ENST00000592395 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
TCF3-216ENST00000592395 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
TCF3-216ENST00000592395 HAMPP81172 84 aa12.02□□□□□ -0.49
TCF3-216ENST00000592395 CBLN2Q8IUK8 224 aa12.02□□□□□ -0.49
TCF3-216ENST00000592395 C2orf88Q9BSF0 95 aa12.02□□□□□ -0.49
TCF3-216ENST00000592395 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.49
TCF3-216ENST00000592395 DNAH8Q96JB1 4490 aa12.01□□□□□ -0.49
TCF3-216ENST00000592395 LINC01549A6NIU2 74 aa12.01□□□□□ -0.49
TCF3-216ENST00000592395 PAPPA-AS1Q5QFB9 102 aa12.01□□□□□ -0.49
TCF3-216ENST00000592395 TIMM17AQ99595 171 aa12.01□□□□□ -0.49
TCF3-216ENST00000592395 VCX2Q9H322 139 aa12.01□□□□□ -0.49
TCF3-216ENST00000592395 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
TCF3-216ENST00000592395 IGHV3OR16-9A0A0B4J2B5 98 aa12□□□□□ -0.49
TCF3-216ENST00000592395 C5orf38Q86SI9 138 aa12□□□□□ -0.49
TCF3-216ENST00000592395 C18orf32Q8TCD1 76 aa12□□□□□ -0.49
TCF3-216ENST00000592395 AMELXQ99217 191 aa12□□□□□ -0.49
TCF3-216ENST00000592395 ZNF561-AS1K7EIQ3 104 aa11.99□□□□□ -0.49
TCF3-216ENST00000592395 APOMO95445 188 aa11.99□□□□□ -0.49
TCF3-216ENST00000592395 SDIM1Q6ZPB5 146 aa11.99□□□□□ -0.49
TCF3-216ENST00000592395 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
TCF3-216ENST00000592395 UBE2D1P51668 147 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 LINC00242Q5T6M2 205 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 SCXQ7RTU7 201 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 ERASQ7Z444 233 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 SCGB3A1Q96QR1 104 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
TCF3-216ENST00000592395 ZC2HC1BQ5TFG8 222 aa11.97□□□□□ -0.49
TCF3-216ENST00000592395 LINC00526Q96FQ7 95 aa11.97□□□□□ -0.49
TCF3-216ENST00000592395 KRTAP4-5Q9BYR2 181 aa11.97□□□□□ -0.49
TCF3-216ENST00000592395 SMR3BP02814 79 aaPredicted RBP11.96□□□□□ -0.49
TCF3-216ENST00000592395 LINC00614P0C842 121 aa11.96□□□□□ -0.49
TCF3-216ENST00000592395 IGLV4-69A0A075B6H9 119 aa11.95□□□□□ -0.5
TCF3-216ENST00000592395 EPM2AB3EWF7 344 aa11.95□□□□□ -0.5
TCF3-216ENST00000592395 OR10D4PQ8NGN7 298 aa11.95□□□□□ -0.5
TCF3-216ENST00000592395 CARD19Q96LW7 228 aa11.95□□□□□ -0.5
TCF3-216ENST00000592395 RAB5BP61020 215 aa11.94□□□□□ -0.5
TCF3-216ENST00000592395 COX6A2Q02221 97 aa11.94□□□□□ -0.5
TCF3-216ENST00000592395 SYCNQ0VAF6 134 aa11.94□□□□□ -0.5
TCF3-216ENST00000592395 CIRBP-AS1Q8TBR5 109 aa11.94□□□□□ -0.5
TCF3-216ENST00000592395 URB1-AS1Q96HZ7 61 aa11.94□□□□□ -0.5
TCF3-216ENST00000592395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.94□□□□□ -0.5
TCF3-216ENST00000592395 A0A087WZ39 114 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 SEC11AP67812 179 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 SPAG11BQ08648 103 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 ORAOV1Q8WV07 137 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
TCF3-216ENST00000592395 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
TCF3-216ENST00000592395 Q5VSD8 79 aa11.92□□□□□ -0.5
TCF3-216ENST00000592395 PKIGQ9Y2B9 76 aa11.92□□□□□ -0.5
TCF3-216ENST00000592395 A0A096LNJ9 63 aa11.91□□□□□ -0.5
TCF3-216ENST00000592395 PANO1I0J062 215 aa11.91□□□□□ -0.5
TCF3-216ENST00000592395 LINC01561Q8N1V8 128 aa11.91□□□□□ -0.5
TCF3-216ENST00000592395 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
TCF3-216ENST00000592395 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
TCF3-216ENST00000592395 HBDP02042 147 aa11.9□□□□□ -0.5
TCF3-216ENST00000592395 F8WDY8 70 aa11.89□□□□□ -0.51
TCF3-216ENST00000592395 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
TCF3-216ENST00000592395 TRGC2P03986 189 aa11.89□□□□□ -0.51
TCF3-216ENST00000592395 HERVK_113P63121 156 aa11.89□□□□□ -0.51
TCF3-216ENST00000592395 Q6ZRU5 148 aa11.89□□□□□ -0.51
TCF3-216ENST00000592395 CHTF8P0CG12 524 aa11.88□□□□□ -0.51
TCF3-216ENST00000592395 SPACA4Q8TDM5 124 aa11.88□□□□□ -0.51
TCF3-216ENST00000592395 GEMIN7Q9H840 131 aaKnown RBP11.88□□□□□ -0.51
TCF3-216ENST00000592395 COLCA2A8K830 154 aa11.87□□□□□ -0.51
TCF3-216ENST00000592395 PMVKQ15126 192 aa11.87□□□□□ -0.51
TCF3-216ENST00000592395 PMCHL1Q16048 86 aa11.87□□□□□ -0.51
TCF3-216ENST00000592395 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
TCF3-216ENST00000592395 CST9LQ9H4G1 147 aa11.87□□□□□ -0.51
TCF3-216ENST00000592395 FAT1Q14517 4588 aa11.87□□□□□ -0.51
TCF3-216ENST00000592395 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
TCF3-216ENST00000592395 DPH3Q96FX2 82 aa11.86□□□□□ -0.51
TCF3-216ENST00000592395 PCLOQ9Y6V0 5065 aa11.86□□□□□ -0.51
TCF3-216ENST00000592395 A0A096LNI7 61 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 IGKV2-24A0A0C4DH68 120 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 TINCRA0A1B0GVN0 87 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 NDUFA1O15239 70 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
TCF3-216ENST00000592395 LINC00474Q9P2X8 69 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
TCF3-216ENST00000592395 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
TCF3-216ENST00000592395 ATP5LO75964 103 aa11.84□□□□□ -0.51
TCF3-216ENST00000592395 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
TCF3-216ENST00000592395 ABCA13Q86UQ4 5058 aa11.84□□□□□ -0.51
TCF3-216ENST00000592395 A0A087WYN8 130 aa11.83□□□□□ -0.52
TCF3-216ENST00000592395 PLA2G1BP04054 148 aaKnown RBP11.83□□□□□ -0.52
TCF3-216ENST00000592395 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
TCF3-216ENST00000592395 BAGE3Q86Y29 109 aa11.83□□□□□ -0.52
TCF3-216ENST00000592395 PACRGQ96M98 296 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms