RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 A0A0J9YXV3 536 aa12.11□□□□□ -0.47
CROCCP3-205ENST00000591316 H0Y8G0 127 aa12.11□□□□□ -0.47
CROCCP3-205ENST00000591316 FAT2Q9NYQ8 4349 aa12.11□□□□□ -0.47
CROCCP3-205ENST00000591316 EREGO14944 169 aa12.1□□□□□ -0.47
CROCCP3-205ENST00000591316 S100A6P06703 90 aa12.1□□□□□ -0.47
CROCCP3-205ENST00000591316 HSPB8Q9UJY1 196 aa12.1□□□□□ -0.47
CROCCP3-205ENST00000591316 USP17L23D6RBM5 183 aa12.09□□□□□ -0.47
CROCCP3-205ENST00000591316 MALP21145 153 aa12.09□□□□□ -0.47
CROCCP3-205ENST00000591316 COX7A2LO14548 114 aa12.09□□□□□ -0.47
CROCCP3-205ENST00000591316 FUSP35637 526 aaKnown RBP eCLIP12.09□□□□□ -0.47
CROCCP3-205ENST00000591316 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
CROCCP3-205ENST00000591316 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
CROCCP3-205ENST00000591316 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.06□□□□□ -0.48
CROCCP3-205ENST00000591316 SEC11AP67812 179 aa12.06□□□□□ -0.48
CROCCP3-205ENST00000591316 CFAP161Q6P656 301 aa12.06□□□□□ -0.48
CROCCP3-205ENST00000591316 Q8N814 137 aa12.06□□□□□ -0.48
CROCCP3-205ENST00000591316 HERVK_113P63121 156 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 CHTOPQ9Y3Y2 248 aaKnown RBP12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 MAP1LC3CQ9BXW4 147 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
CROCCP3-205ENST00000591316 hDV102S1A0JD36 115 aa12.04□□□□□ -0.48
CROCCP3-205ENST00000591316 SNRPEP62304 92 aaKnown RBP12.04□□□□□ -0.48
CROCCP3-205ENST00000591316 LINC00469Q8N7U9 141 aa12.04□□□□□ -0.48
CROCCP3-205ENST00000591316 C15orf56Q8N910 161 aa12.04□□□□□ -0.48
CROCCP3-205ENST00000591316 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
CROCCP3-205ENST00000591316 IGHV1-58A0A0C4DH39 117 aa12.03□□□□□ -0.48
CROCCP3-205ENST00000591316 A0A1B0GVY2 172 aa12.03□□□□□ -0.48
CROCCP3-205ENST00000591316 KRTAP10-2P60368 255 aa12.03□□□□□ -0.48
CROCCP3-205ENST00000591316 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
CROCCP3-205ENST00000591316 IGLV4-69A0A075B6H9 119 aa12.02□□□□□ -0.49
CROCCP3-205ENST00000591316 A0A087WZ39 114 aa12.02□□□□□ -0.49
CROCCP3-205ENST00000591316 S100A2P29034 98 aa12.02□□□□□ -0.49
CROCCP3-205ENST00000591316 C14orf177Q52M58 125 aa12.02□□□□□ -0.49
CROCCP3-205ENST00000591316 APOMO95445 188 aa12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 IGLC3P0DOY3 106 aa12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 HIST3H2BBQ8N257 126 aa12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 CHAC1Q9BUX1 264 aa12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 TMA7Q9Y2S6 64 aaKnown RBP12.01□□□□□ -0.49
CROCCP3-205ENST00000591316 DNAH11Q96DT5 4516 aa12□□□□□ -0.49
CROCCP3-205ENST00000591316 C11orf86A6NJI1 115 aa12□□□□□ -0.49
CROCCP3-205ENST00000591316 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
CROCCP3-205ENST00000591316 ORAOV1Q8WV07 137 aa12□□□□□ -0.49
CROCCP3-205ENST00000591316 PACRGQ96M98 296 aaPredicted RBP12□□□□□ -0.49
CROCCP3-205ENST00000591316 EPPK1P58107 5090 aaKnown RBP11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 PKD1P98161 4303 aa11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 F8VRH5 84 aa11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 KRTDAPP60985 99 aa11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 ODF1Q14990 250 aa11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 TMEM170BQ5T4T1 132 aa11.99□□□□□ -0.49
CROCCP3-205ENST00000591316 IGHV3-64A0A075B6Q5 118 aa11.98□□□□□ -0.49
CROCCP3-205ENST00000591316 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
CROCCP3-205ENST00000591316 SYS1-DBNDD2H3BUS1 97 aa11.98□□□□□ -0.49
CROCCP3-205ENST00000591316 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
CROCCP3-205ENST00000591316 GVQW2A0A096LPI5 108 aaPredicted RBP11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 ZNF22P17026 224 aaPredicted RBP11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 TOMM7Q9P0U1 55 aa11.97□□□□□ -0.49
CROCCP3-205ENST00000591316 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
CROCCP3-205ENST00000591316 SLPIP03973 132 aa11.96□□□□□ -0.49
CROCCP3-205ENST00000591316 HIST1H2BLQ99880 126 aa11.96□□□□□ -0.49
CROCCP3-205ENST00000591316 H3BRM9 83 aa11.96□□□□□ -0.5
CROCCP3-205ENST00000591316 SPAG11BQ08648 103 aa11.96□□□□□ -0.5
CROCCP3-205ENST00000591316 NTN5Q8WTR8 489 aaPredicted RBP11.96□□□□□ -0.5
CROCCP3-205ENST00000591316 LINC01620Q4KN68 170 aa11.95□□□□□ -0.5
CROCCP3-205ENST00000591316 LINC01561Q8N1V8 128 aa11.95□□□□□ -0.5
CROCCP3-205ENST00000591316 OR10D4PQ8NGN7 298 aa11.94□□□□□ -0.5
CROCCP3-205ENST00000591316 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
CROCCP3-205ENST00000591316 PET117Q6UWS5 81 aa11.93□□□□□ -0.5
CROCCP3-205ENST00000591316 C16orf90A8MZG2 172 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 DPM2O94777 84 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 PRSS2P07478 247 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 IGKCP01834 107 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 CAMK2N2Q96S95 79 aa11.92□□□□□ -0.5
CROCCP3-205ENST00000591316 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
CROCCP3-205ENST00000591316 PLNP26678 52 aa11.91□□□□□ -0.5
CROCCP3-205ENST00000591316 GCSHP23434 173 aa11.9□□□□□ -0.5
CROCCP3-205ENST00000591316 CNBPP62633 177 aaKnown RBP11.9□□□□□ -0.5
CROCCP3-205ENST00000591316 SYCNQ0VAF6 134 aa11.9□□□□□ -0.5
CROCCP3-205ENST00000591316 LINC01545Q5VT33 79 aa11.9□□□□□ -0.5
CROCCP3-205ENST00000591316 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
CROCCP3-205ENST00000591316 C2orf82Q6UX34 121 aa11.89□□□□□ -0.51
CROCCP3-205ENST00000591316 Q6ZRU5 148 aa11.89□□□□□ -0.51
CROCCP3-205ENST00000591316 TMEM223A0PJW6 202 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 UNQ6190/PRO20217Q6UXQ8 127 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 COX7B2Q8TF08 81 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 CARD19Q96LW7 228 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 CKS1BP61024 79 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
CROCCP3-205ENST00000591316 Q8IZM0 81 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms