RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 OPRPNQ99935 248 aaPredicted RBP11.74□□□□□ -0.53
VAT1-208ENST00000590924 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
VAT1-208ENST00000590924 Q6ZN92 141 aa11.73□□□□□ -0.53
VAT1-208ENST00000590924 HBDP02042 147 aa11.72□□□□□ -0.53
VAT1-208ENST00000590924 TEX43Q6ZNM6 134 aa11.72□□□□□ -0.53
VAT1-208ENST00000590924 AMELXQ99217 191 aa11.72□□□□□ -0.53
VAT1-208ENST00000590924 VCX2Q9H322 139 aa11.72□□□□□ -0.53
VAT1-208ENST00000590924 A0A096LNJ9 63 aa11.71□□□□□ -0.53
VAT1-208ENST00000590924 RNASE13Q5GAN3 156 aaKnown RBP11.71□□□□□ -0.53
VAT1-208ENST00000590924 CD164L2Q6UWJ8 174 aa11.71□□□□□ -0.53
VAT1-208ENST00000590924 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
VAT1-208ENST00000590924 TRAV13-1A0A0B4J241 112 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 IFITM10A6NMD0 228 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 C14orf177Q52M58 125 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 PDZD11Q5EBL8 140 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 C2orf88Q9BSF0 95 aa11.7□□□□□ -0.54
VAT1-208ENST00000590924 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BKO60814 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HSBP1O75506 76 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BJP06899 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BOP23527 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BBP33778 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BDP58876 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BCP62807 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST2H2BEQ16778 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.69□□□□□ -0.54
VAT1-208ENST00000590924 SCXQ7RTU7 201 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BHQ93079 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BNQ99877 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 HIST1H2BMQ99879 126 aa11.69□□□□□ -0.54
VAT1-208ENST00000590924 ATP5LO75964 103 aa11.68□□□□□ -0.54
VAT1-208ENST00000590924 XCL1P47992 114 aa11.68□□□□□ -0.54
VAT1-208ENST00000590924 FOXI1Q12951 378 aa11.68□□□□□ -0.54
VAT1-208ENST00000590924 LINC00173Q6ZV60 143 aa11.68□□□□□ -0.54
VAT1-208ENST00000590924 SERF1AO75920 110 aa11.67□□□□□ -0.54
VAT1-208ENST00000590924 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
VAT1-208ENST00000590924 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
VAT1-208ENST00000590924 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
VAT1-208ENST00000590924 J3QL48 77 aa11.66□□□□□ -0.54
VAT1-208ENST00000590924 UBE2D1P51668 147 aa11.66□□□□□ -0.54
VAT1-208ENST00000590924 SEC11AP67812 179 aa11.66□□□□□ -0.54
VAT1-208ENST00000590924 PMCHL1Q16048 86 aa11.66□□□□□ -0.54
VAT1-208ENST00000590924 LINC00310P59036 64 aa11.65□□□□□ -0.54
VAT1-208ENST00000590924 CHAC1Q9BUX1 264 aa11.65□□□□□ -0.54
VAT1-208ENST00000590924 IGHV3OR16-9A0A0B4J2B5 98 aa11.64□□□□□ -0.55
VAT1-208ENST00000590924 PMVKQ15126 192 aa11.64□□□□□ -0.55
VAT1-208ENST00000590924 LINC00242Q5T6M2 205 aa11.64□□□□□ -0.55
VAT1-208ENST00000590924 CST9LQ9H4G1 147 aa11.64□□□□□ -0.55
VAT1-208ENST00000590924 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
VAT1-208ENST00000590924 COX7A2LO14548 114 aa11.63□□□□□ -0.55
VAT1-208ENST00000590924 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
VAT1-208ENST00000590924 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
VAT1-208ENST00000590924 NUPR1O60356 82 aa11.62□□□□□ -0.55
VAT1-208ENST00000590924 ZC2HC1BQ5TFG8 222 aa11.62□□□□□ -0.55
VAT1-208ENST00000590924 FAM19A2Q8N3H0 131 aa11.62□□□□□ -0.55
VAT1-208ENST00000590924 LINC01561Q8N1V8 128 aa11.61□□□□□ -0.55
VAT1-208ENST00000590924 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
VAT1-208ENST00000590924 APOMO95445 188 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 PRSS1P07477 247 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 MALP21145 153 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 KRTAP10-4P60372 401 aaPredicted RBP11.6□□□□□ -0.55
VAT1-208ENST00000590924 HERVK_113P63121 156 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 IFI27L1Q96BM0 104 aa11.6□□□□□ -0.55
VAT1-208ENST00000590924 A0A087WZ39 114 aa11.59□□□□□ -0.55
VAT1-208ENST00000590924 TINCRA0A1B0GVN0 87 aa11.59□□□□□ -0.55
VAT1-208ENST00000590924 LEPROTL1O95214 131 aa11.59□□□□□ -0.55
VAT1-208ENST00000590924 COX6A2Q02221 97 aa11.59□□□□□ -0.55
VAT1-208ENST00000590924 C5orf38Q86SI9 138 aa11.59□□□□□ -0.55
VAT1-208ENST00000590924 GVQW2A0A096LPI5 108 aaPredicted RBP11.58□□□□□ -0.56
VAT1-208ENST00000590924 PACRGQ96M98 296 aaPredicted RBP11.58□□□□□ -0.56
VAT1-208ENST00000590924 GEMIN7Q9H840 131 aaKnown RBP11.58□□□□□ -0.56
VAT1-208ENST00000590924 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
VAT1-208ENST00000590924 TRAV12-1A0A0B4J245 112 aa11.57□□□□□ -0.56
VAT1-208ENST00000590924 A0A0J9YXV3 536 aa11.57□□□□□ -0.56
VAT1-208ENST00000590924 hDV102S1A0JD36 115 aa11.57□□□□□ -0.56
VAT1-208ENST00000590924 NDUFA6P56556 154 aa11.57□□□□□ -0.56
VAT1-208ENST00000590924 CNBPP62633 177 aaKnown RBP11.56□□□□□ -0.56
VAT1-208ENST00000590924 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
VAT1-208ENST00000590924 IGHV3-64A0A075B6Q5 118 aa11.55□□□□□ -0.56
VAT1-208ENST00000590924 IGLV5-45A0A087WSX0 123 aa11.55□□□□□ -0.56
VAT1-208ENST00000590924 ZNF561-AS1K7EIQ3 104 aa11.54□□□□□ -0.56
VAT1-208ENST00000590924 IGLC3P0DOY3 106 aa11.54□□□□□ -0.56
VAT1-208ENST00000590924 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
VAT1-208ENST00000590924 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.53□□□□□ -0.56
VAT1-208ENST00000590924 F8WDY8 70 aa11.53□□□□□ -0.56
VAT1-208ENST00000590924 C9orf163Q8N9P6 203 aa11.53□□□□□ -0.56
VAT1-208ENST00000590924 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
VAT1-208ENST00000590924 PKHD1L1Q86WI1 4243 aa11.52□□□□□ -0.56
VAT1-208ENST00000590924 FABP4P15090 132 aa11.52□□□□□ -0.57
VAT1-208ENST00000590924 HIGD2BQ4VC39 106 aa11.52□□□□□ -0.57
VAT1-208ENST00000590924 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
VAT1-208ENST00000590924 CHTOPQ9Y3Y2 248 aaKnown RBP11.52□□□□□ -0.57
VAT1-208ENST00000590924 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
VAT1-208ENST00000590924 OXTP01178 125 aa11.51□□□□□ -0.57
VAT1-208ENST00000590924 LINC00469Q8N7U9 141 aa11.51□□□□□ -0.57
VAT1-208ENST00000590924 H3BRM9 83 aa11.5□□□□□ -0.57
VAT1-208ENST00000590924 SLPIP03973 132 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms