RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 MUC2Q02817 5179 aa10.73□□□□□ -0.69
RETREG3-210ENST00000590541 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
RETREG3-210ENST00000590541 APOMO95445 188 aa10.72□□□□□ -0.69
RETREG3-210ENST00000590541 RAB5AP20339 215 aa10.72□□□□□ -0.69
RETREG3-210ENST00000590541 MRPS36P82909 103 aaKnown RBP10.72□□□□□ -0.69
RETREG3-210ENST00000590541 Q6ZUT4 128 aa10.72□□□□□ -0.69
RETREG3-210ENST00000590541 PRELID3AQ96N28 172 aa10.72□□□□□ -0.69
RETREG3-210ENST00000590541 A0A096LNI7 61 aa10.71□□□□□ -0.69
RETREG3-210ENST00000590541 PRSS47A8MTI9 375 aa10.71□□□□□ -0.69
RETREG3-210ENST00000590541 CLLU1Q5K131 121 aa10.71□□□□□ -0.69
RETREG3-210ENST00000590541 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
RETREG3-210ENST00000590541 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
RETREG3-210ENST00000590541 C2orf48Q96LS8 159 aa10.7□□□□□ -0.7
RETREG3-210ENST00000590541 IGLV4-69A0A075B6H9 119 aa10.69□□□□□ -0.7
RETREG3-210ENST00000590541 F8WDY8 70 aa10.68□□□□□ -0.7
RETREG3-210ENST00000590541 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
RETREG3-210ENST00000590541 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
RETREG3-210ENST00000590541 PYGO1Q9Y3Y4 419 aa10.68□□□□□ -0.7
RETREG3-210ENST00000590541 LOC107984640A0A0U1RRK4 108 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 IFI27P40305 119 aaPredicted RBP10.67□□□□□ -0.7
RETREG3-210ENST00000590541 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 Q6ZRP5 223 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
RETREG3-210ENST00000590541 K7EMI3 77 aa10.66□□□□□ -0.7
RETREG3-210ENST00000590541 C5orf38Q86SI9 138 aa10.66□□□□□ -0.7
RETREG3-210ENST00000590541 IGHV3OR16-9A0A0B4J2B5 98 aa10.65□□□□□ -0.7
RETREG3-210ENST00000590541 IFITM10A6NMD0 228 aa10.65□□□□□ -0.7
RETREG3-210ENST00000590541 RNF151Q2KHN1 245 aa10.65□□□□□ -0.7
RETREG3-210ENST00000590541 FAM104AQ969W3 186 aa10.65□□□□□ -0.7
RETREG3-210ENST00000590541 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
RETREG3-210ENST00000590541 CTDSP1Q9GZU7 261 aa10.64□□□□□ -0.71
RETREG3-210ENST00000590541 NPSP0C0P6 89 aa10.63□□□□□ -0.71
RETREG3-210ENST00000590541 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
RETREG3-210ENST00000590541 ORMDL2Q53FV1 153 aa10.63□□□□□ -0.71
RETREG3-210ENST00000590541 Q8N8P6 123 aa10.63□□□□□ -0.71
RETREG3-210ENST00000590541 TMEM141Q96I45 108 aa10.63□□□□□ -0.71
RETREG3-210ENST00000590541 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
RETREG3-210ENST00000590541 TRAV9-1A0A075B6T8 112 aa10.62□□□□□ -0.71
RETREG3-210ENST00000590541 TGIF2-C20orf24A0A0A6YYL0 155 aa10.62□□□□□ -0.71
RETREG3-210ENST00000590541 G0S2P27469 103 aa10.62□□□□□ -0.71
RETREG3-210ENST00000590541 NXT2Q9NPJ8 142 aaKnown RBP10.62□□□□□ -0.71
RETREG3-210ENST00000590541 CYSLTR1Q9Y271 337 aa10.62□□□□□ -0.71
RETREG3-210ENST00000590541 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
RETREG3-210ENST00000590541 TMEM218A2RU14 115 aa10.61□□□□□ -0.71
RETREG3-210ENST00000590541 ORAOV1Q8WV07 137 aa10.61□□□□□ -0.71
RETREG3-210ENST00000590541 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 KRTAP9-6A0A140TA67 174 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 Q6ZN92 141 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 C2orf88Q9BSF0 95 aa10.6□□□□□ -0.71
RETREG3-210ENST00000590541 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
RETREG3-210ENST00000590541 A0A087WZ39 114 aa10.59□□□□□ -0.71
RETREG3-210ENST00000590541 NDUFA1O15239 70 aa10.59□□□□□ -0.71
RETREG3-210ENST00000590541 C2orf66Q6UXQ4 117 aa10.59□□□□□ -0.71
RETREG3-210ENST00000590541 SEC11CQ9BY50 192 aa10.59□□□□□ -0.71
RETREG3-210ENST00000590541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
RETREG3-210ENST00000590541 PAPPA-AS1Q5QFB9 102 aa10.58□□□□□ -0.72
RETREG3-210ENST00000590541 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
RETREG3-210ENST00000590541 LINC01561Q8N1V8 128 aa10.58□□□□□ -0.72
RETREG3-210ENST00000590541 FAT4Q6V0I7 4981 aa10.57□□□□□ -0.72
RETREG3-210ENST00000590541 ADCYAP1P18509 176 aa10.57□□□□□ -0.72
RETREG3-210ENST00000590541 IFITM2Q01629 132 aa10.57□□□□□ -0.72
RETREG3-210ENST00000590541 S100PP25815 95 aa10.56□□□□□ -0.72
RETREG3-210ENST00000590541 RPL18AQ02543 176 aaKnown RBP10.56□□□□□ -0.72
RETREG3-210ENST00000590541 AMELXQ99217 191 aa10.56□□□□□ -0.72
RETREG3-210ENST00000590541 VCX2Q9H322 139 aa10.56□□□□□ -0.72
RETREG3-210ENST00000590541 PSORS1C2Q9UIG4 136 aa10.56□□□□□ -0.72
RETREG3-210ENST00000590541 LINC01549A6NIU2 74 aa10.55□□□□□ -0.72
RETREG3-210ENST00000590541 TLX1NBP0CAT3 122 aa10.55□□□□□ -0.72
RETREG3-210ENST00000590541 UBE2D1P51668 147 aa10.55□□□□□ -0.72
RETREG3-210ENST00000590541 COX19Q49B96 90 aa10.55□□□□□ -0.72
RETREG3-210ENST00000590541 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
RETREG3-210ENST00000590541 A0A0U1RQV1 116 aa10.54□□□□□ -0.72
RETREG3-210ENST00000590541 SEC11AP67812 179 aa10.54□□□□□ -0.72
RETREG3-210ENST00000590541 A0A1W2PNN7 141 aa10.53□□□□□ -0.72
RETREG3-210ENST00000590541 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
RETREG3-210ENST00000590541 C9orf116Q5BN46 136 aaPredicted RBP10.53□□□□□ -0.72
RETREG3-210ENST00000590541 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
RETREG3-210ENST00000590541 FAM19A3Q7Z5A8 133 aa10.53□□□□□ -0.72
RETREG3-210ENST00000590541 GNB1LQ9BYB4 327 aa10.53□□□□□ -0.72
RETREG3-210ENST00000590541 TRBV30A0A0K0K1B3 111 aa10.52□□□□□ -0.73
RETREG3-210ENST00000590541 KIAA0087Q14695 138 aa10.52□□□□□ -0.73
RETREG3-210ENST00000590541 LINC00173Q6ZV60 143 aa10.52□□□□□ -0.73
RETREG3-210ENST00000590541 TIMM17AQ99595 171 aa10.52□□□□□ -0.73
RETREG3-210ENST00000590541 UNQ6190/PRO20217Q6UXQ8 127 aa10.51□□□□□ -0.73
RETREG3-210ENST00000590541 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
RETREG3-210ENST00000590541 MT-ND6P03923 174 aa10.5□□□□□ -0.73
RETREG3-210ENST00000590541 HERVK_113P63121 156 aa10.5□□□□□ -0.73
RETREG3-210ENST00000590541 C10orf25Q5T742 122 aa10.5□□□□□ -0.73
RETREG3-210ENST00000590541 COMMD7Q86VX2 200 aa10.5□□□□□ -0.73
RETREG3-210ENST00000590541 C6orf48Q9UBA6 75 aa10.5□□□□□ -0.73
RETREG3-210ENST00000590541 PRSS2P07478 247 aa10.49□□□□□ -0.73
RETREG3-210ENST00000590541 RHEBQ15382 184 aa10.49□□□□□ -0.73
RETREG3-210ENST00000590541 KIAA1644Q3SXP7 199 aa10.49□□□□□ -0.73
RETREG3-210ENST00000590541 C1orf137Q5JT78 98 aa10.49□□□□□ -0.73
RETREG3-210ENST00000590541 C10orf91Q5T1B1 145 aa10.49□□□□□ -0.73
RETREG3-210ENST00000590541 ERASQ7Z444 233 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms