RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 KRTAP3-3Q9BYR6 98 aa9.02□□□□□ -0.97
VMP1-210ENST00000589823 KRTAP3-2Q9BYR7 98 aa9.02□□□□□ -0.97
VMP1-210ENST00000589823 A0A087WTM6 91 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 TRAV12-1A0A0B4J245 112 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 LRCOL1A6NCL2 159 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 LECT2O14960 151 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 MALP21145 153 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 HERVK_113P63121 156 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
VMP1-210ENST00000589823 GEMIN7Q9H840 131 aaKnown RBP9.01□□□□□ -0.97
VMP1-210ENST00000589823 A0A0J9YXV3 536 aa9□□□□□ -0.97
VMP1-210ENST00000589823 TINCRA0A1B0GVN0 87 aa9□□□□□ -0.97
VMP1-210ENST00000589823 USP17L23D6RBM5 183 aa9□□□□□ -0.97
VMP1-210ENST00000589823 H0Y8G0 127 aa9□□□□□ -0.97
VMP1-210ENST00000589823 C14orf177Q52M58 125 aa9□□□□□ -0.97
VMP1-210ENST00000589823 C5orf38Q86SI9 138 aa9□□□□□ -0.97
VMP1-210ENST00000589823 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
VMP1-210ENST00000589823 IGHV3OR16-9A0A0B4J2B5 98 aa8.99□□□□□ -0.97
VMP1-210ENST00000589823 S100A2P29034 98 aa8.99□□□□□ -0.97
VMP1-210ENST00000589823 COX6A2Q02221 97 aa8.99□□□□□ -0.97
VMP1-210ENST00000589823 CHTOPQ9Y3Y2 248 aaKnown RBP8.99□□□□□ -0.97
VMP1-210ENST00000589823 IGHV1-58A0A0C4DH39 117 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 APOMO95445 188 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 WFDC2Q14508 124 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 HIST3H2BBQ8N257 126 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 LINC00469Q8N7U9 141 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 Q8N814 137 aa8.98□□□□□ -0.97
VMP1-210ENST00000589823 A0A087WZ39 114 aa8.97□□□□□ -0.97
VMP1-210ENST00000589823 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
VMP1-210ENST00000589823 SNRPEP62304 92 aaKnown RBP8.97□□□□□ -0.97
VMP1-210ENST00000589823 CHAC1Q9BUX1 264 aa8.97□□□□□ -0.97
VMP1-210ENST00000589823 F8VRH5 84 aa8.96□□□□□ -0.98
VMP1-210ENST00000589823 LINC01561Q8N1V8 128 aa8.96□□□□□ -0.98
VMP1-210ENST00000589823 C15orf56Q8N910 161 aa8.96□□□□□ -0.98
VMP1-210ENST00000589823 MRPL35Q9NZE8 188 aaKnown RBP8.96□□□□□ -0.98
VMP1-210ENST00000589823 CDKN2A-AS1Q9UH64 79 aa8.96□□□□□ -0.98
VMP1-210ENST00000589823 IGLV4-69A0A075B6H9 119 aa8.95□□□□□ -0.98
VMP1-210ENST00000589823 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
VMP1-210ENST00000589823 H3BRM9 83 aa8.95□□□□□ -0.98
VMP1-210ENST00000589823 ODF1Q14990 250 aa8.95□□□□□ -0.98
VMP1-210ENST00000589823 HIGD2BQ4VC39 106 aa8.95□□□□□ -0.98
VMP1-210ENST00000589823 TMA7Q9Y2S6 64 aaKnown RBP8.95□□□□□ -0.98
VMP1-210ENST00000589823 DNAH11Q96DT5 4516 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.94□□□□□ -0.98
VMP1-210ENST00000589823 IGHV3-64A0A075B6Q5 118 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 C5orf52A6NGY3 159 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 SYS1-DBNDD2H3BUS1 97 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 KRTDAPP60985 99 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 OR10D4PQ8NGN7 298 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
VMP1-210ENST00000589823 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
VMP1-210ENST00000589823 C11orf86A6NJI1 115 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 ZNF561-AS1K7EIQ3 104 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 ZNF22P17026 224 aaPredicted RBP8.93□□□□□ -0.98
VMP1-210ENST00000589823 TMEM170BQ5T4T1 132 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 PET117Q6UWS5 81 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 NTN5Q8WTR8 489 aaPredicted RBP8.93□□□□□ -0.98
VMP1-210ENST00000589823 ORAOV1Q8WV07 137 aa8.93□□□□□ -0.98
VMP1-210ENST00000589823 PKD1P98161 4303 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 A0A1B0GVY2 172 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 PLNP26678 52 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 SPAG11BQ08648 103 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 PMCHL2Q9BQD1 86 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 PGPEP1Q9NXJ5 209 aa8.92□□□□□ -0.98
VMP1-210ENST00000589823 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
VMP1-210ENST00000589823 IGLV5-52A0A0A0MRZ9 124 aa8.91□□□□□ -0.98
VMP1-210ENST00000589823 DPM2O94777 84 aa8.91□□□□□ -0.98
VMP1-210ENST00000589823 SPINK8P0C7L1 97 aa8.91□□□□□ -0.98
VMP1-210ENST00000589823 C20orf202A1L168 122 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 IGKCP01834 107 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 PRSS2P07478 247 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 TOMM7Q9P0U1 55 aa8.9□□□□□ -0.98
VMP1-210ENST00000589823 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.89□□□□□ -0.99
VMP1-210ENST00000589823 KRTAP10-2P60368 255 aa8.89□□□□□ -0.99
VMP1-210ENST00000589823 LINC01545Q5VT33 79 aa8.89□□□□□ -0.99
VMP1-210ENST00000589823 LINC00526Q96FQ7 95 aa8.89□□□□□ -0.99
VMP1-210ENST00000589823 FUSP35637 526 aaKnown RBP eCLIP8.88□□□□□ -0.99
VMP1-210ENST00000589823 CNBPP62633 177 aaKnown RBP8.88□□□□□ -0.99
VMP1-210ENST00000589823 C6orf226Q5I0X4 101 aa8.88□□□□□ -0.99
VMP1-210ENST00000589823 Q8IZM0 81 aa8.88□□□□□ -0.99
VMP1-210ENST00000589823 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
VMP1-210ENST00000589823 CAMK2N2Q96S95 79 aa8.88□□□□□ -0.99
VMP1-210ENST00000589823 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
VMP1-210ENST00000589823 F8WDY8 70 aa8.87□□□□□ -0.99
VMP1-210ENST00000589823 AKR1D1P51857 326 aa8.87□□□□□ -0.99
VMP1-210ENST00000589823 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
VMP1-210ENST00000589823 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
VMP1-210ENST00000589823 DNAH5Q8TE73 4624 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 IGLV5-39A0A0G2JS06 123 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 NDUFA1O15239 70 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 CKS1BP61024 79 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 HERVK_113P61574 105 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 KIAA0087Q14695 138 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 CARD19Q96LW7 228 aa8.86□□□□□ -0.99
VMP1-210ENST00000589823 C16orf90A8MZG2 172 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms