RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 KRTAP17-1Q9BYP8 105 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
SDF2-208ENST00000589788 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
SDF2-208ENST00000589788 H7C423 109 aa6.83□□□□□ -1.32
SDF2-208ENST00000589788 HSBP1O75506 76 aa6.83□□□□□ -1.32
SDF2-208ENST00000589788 FCER1GP30273 86 aa6.83□□□□□ -1.32
SDF2-208ENST00000589788 C14orf177Q52M58 125 aa6.83□□□□□ -1.32
SDF2-208ENST00000589788 PKHD1P08F94 4074 aa6.83□□□□□ -1.32
SDF2-208ENST00000589788 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
SDF2-208ENST00000589788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.82□□□□□ -1.32
SDF2-208ENST00000589788 TRAV8-4A0A0B4J246 113 aa6.82□□□□□ -1.32
SDF2-208ENST00000589788 IGKV2-29A2NJV5 120 aaPredicted RBP6.82□□□□□ -1.32
SDF2-208ENST00000589788 NUPR1O60356 82 aa6.82□□□□□ -1.32
SDF2-208ENST00000589788 FGF6P10767 208 aa6.82□□□□□ -1.32
SDF2-208ENST00000589788 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
SDF2-208ENST00000589788 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
SDF2-208ENST00000589788 C5orf52A6NGY3 159 aa6.81□□□□□ -1.32
SDF2-208ENST00000589788 G0S2P27469 103 aa6.81□□□□□ -1.32
SDF2-208ENST00000589788 TMEM101Q96IK0 257 aa6.81□□□□□ -1.32
SDF2-208ENST00000589788 A0A096LNJ9 63 aa6.8□□□□□ -1.32
SDF2-208ENST00000589788 LINC01549A6NIU2 74 aa6.8□□□□□ -1.32
SDF2-208ENST00000589788 USP17L23D6RBM5 183 aa6.8□□□□□ -1.32
SDF2-208ENST00000589788 HBDP02042 147 aa6.8□□□□□ -1.32
SDF2-208ENST00000589788 ZNF25P17030 456 aaPredicted RBP6.8□□□□□ -1.32
SDF2-208ENST00000589788 SNRPEP62304 92 aaKnown RBP6.8□□□□□ -1.32
SDF2-208ENST00000589788 KIAA1109Q2LD37 5005 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 SMAGPQ0VAQ4 97 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 PMCHL1Q16048 86 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 C2orf66Q6UXQ4 117 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 FAM19A2Q8N3H0 131 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 OR5A1Q8NGJ0 315 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 TOMM6Q96B49 74 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 PACRGQ96M98 296 aaPredicted RBP6.79□□□□□ -1.32
SDF2-208ENST00000589788 CYSLTR1Q9Y271 337 aa6.79□□□□□ -1.32
SDF2-208ENST00000589788 PDZD11Q5EBL8 140 aa6.78□□□□□ -1.32
SDF2-208ENST00000589788 KRTAP26-1Q6PEX3 210 aa6.78□□□□□ -1.32
SDF2-208ENST00000589788 DNAH11Q96DT5 4516 aa6.78□□□□□ -1.32
SDF2-208ENST00000589788 S100A2P29034 98 aa6.77□□□□□ -1.32
SDF2-208ENST00000589788 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.32
SDF2-208ENST00000589788 MRPL52Q86TS9 123 aaKnown RBP6.77□□□□□ -1.32
SDF2-208ENST00000589788 LEPROTL1O95214 131 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 PRSS1P07477 247 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 XGP55808 180 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 LINC01620Q4KN68 170 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 ERASQ7Z444 233 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 CHCHD10Q8WYQ3 142 aaPredicted RBP6.76□□□□□ -1.33
SDF2-208ENST00000589788 HIST1H2BLQ99880 126 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 SPANXA1Q9NS26 97 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 UBE2D4Q9Y2X8 147 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 hDV102S1A0JD36 115 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 IGIPA6NJ69 53 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 IFITM10A6NMD0 228 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 ZNF664Q8N3J9 261 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 TIMM17AQ99595 171 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 HSPB8Q9UJY1 196 aa6.76□□□□□ -1.33
SDF2-208ENST00000589788 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
SDF2-208ENST00000589788 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 ATP5LO75964 103 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 FABP4P15090 132 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 SS18Q15532 418 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 TMEM141Q96I45 108 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 SCGB3A1Q96QR1 104 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 CDC42SE2Q9NRR3 84 aa6.75□□□□□ -1.33
SDF2-208ENST00000589788 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
SDF2-208ENST00000589788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.74□□□□□ -1.33
SDF2-208ENST00000589788 XCL1P47992 114 aa6.74□□□□□ -1.33
SDF2-208ENST00000589788 HAMPP81172 84 aa6.74□□□□□ -1.33
SDF2-208ENST00000589788 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
SDF2-208ENST00000589788 LINC00173Q6ZV60 143 aa6.74□□□□□ -1.33
SDF2-208ENST00000589788 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
SDF2-208ENST00000589788 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 EPM2AB3EWF7 344 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 CCL25O15444 150 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 PAPPA-AS1Q5QFB9 102 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
SDF2-208ENST00000589788 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
SDF2-208ENST00000589788 SMR3BP02814 79 aaPredicted RBP6.72□□□□□ -1.33
SDF2-208ENST00000589788 RNASE13Q5GAN3 156 aaKnown RBP6.72□□□□□ -1.33
SDF2-208ENST00000589788 Q6ZN92 141 aa6.72□□□□□ -1.33
SDF2-208ENST00000589788 Q6ZSA8 131 aa6.72□□□□□ -1.33
SDF2-208ENST00000589788 Q6ZUT4 128 aa6.72□□□□□ -1.33
SDF2-208ENST00000589788 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
SDF2-208ENST00000589788 TRAV13-1A0A0B4J241 112 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 CNBPP62633 177 aaKnown RBP6.71□□□□□ -1.34
SDF2-208ENST00000589788 HIGD2BQ4VC39 106 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 CD164L2Q6UWJ8 174 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 C15orf56Q8N910 161 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 AMELXQ99217 191 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.34
SDF2-208ENST00000589788 HERC2O95714 4834 aa6.71□□□□□ -1.34
SDF2-208ENST00000589788 TRAV12-1A0A0B4J245 112 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 GAGE10A6NGK3 116 aa6.7□□□□□ -1.34
SDF2-208ENST00000589788 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms