RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
ATG4D-211ENST00000589753 TINCRA0A1B0GVN0 87 aa10.06□□□□□ -0.8
ATG4D-211ENST00000589753 HERVK_113P63121 156 aa10.06□□□□□ -0.8
ATG4D-211ENST00000589753 COX6A2Q02221 97 aa10.06□□□□□ -0.8
ATG4D-211ENST00000589753 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
ATG4D-211ENST00000589753 IGLV4-69A0A075B6H9 119 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 SYS1-DBNDD2H3BUS1 97 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 COX7A2LO14548 114 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 C5orf38Q86SI9 138 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 RYR2Q92736 4967 aa10.05□□□□□ -0.8
ATG4D-211ENST00000589753 F8VRH5 84 aa10.04□□□□□ -0.8
ATG4D-211ENST00000589753 C3orf79P0CE67 100 aa10.04□□□□□ -0.8
ATG4D-211ENST00000589753 KRTDAPP60985 99 aa10.04□□□□□ -0.8
ATG4D-211ENST00000589753 ODF1Q14990 250 aa10.04□□□□□ -0.8
ATG4D-211ENST00000589753 CHAC1Q9BUX1 264 aa10.04□□□□□ -0.8
ATG4D-211ENST00000589753 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
ATG4D-211ENST00000589753 LRCOL1A6NCL2 159 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 MALP21145 153 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 TNP2Q05952 138 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 PET117Q6UWS5 81 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 LINC00336Q6ZUF6 198 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 SPATA12Q7Z6I5 190 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 CDKN2A-AS1Q9UH64 79 aa10.03□□□□□ -0.8
ATG4D-211ENST00000589753 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 A0A087WTM6 91 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 A0A087WZ39 114 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 USP17L23D6RBM5 183 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 LECT2O14960 151 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 LINC00469Q8N7U9 141 aa10.02□□□□□ -0.81
ATG4D-211ENST00000589753 C11orf86A6NJI1 115 aa10.01□□□□□ -0.81
ATG4D-211ENST00000589753 WFDC2Q14508 124 aa10.01□□□□□ -0.81
ATG4D-211ENST00000589753 CFAP161Q6P656 301 aa10.01□□□□□ -0.81
ATG4D-211ENST00000589753 IGHV1-58A0A0C4DH39 117 aa10□□□□□ -0.81
ATG4D-211ENST00000589753 APOMO95445 188 aa10□□□□□ -0.81
ATG4D-211ENST00000589753 ZNF22P17026 224 aaPredicted RBP10□□□□□ -0.81
ATG4D-211ENST00000589753 LINC01561Q8N1V8 128 aa10□□□□□ -0.81
ATG4D-211ENST00000589753 PMCHL2Q9BQD1 86 aa10□□□□□ -0.81
ATG4D-211ENST00000589753 H3BRM9 83 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 EREGO14944 169 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 DPM2O94777 84 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 PLNP26678 52 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 C14orf177Q52M58 125 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 LINC01545Q5VT33 79 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 C15orf56Q8N910 161 aa9.99□□□□□ -0.81
ATG4D-211ENST00000589753 C20orf202A1L168 122 aa9.98□□□□□ -0.81
ATG4D-211ENST00000589753 IGKCP01834 107 aa9.98□□□□□ -0.81
ATG4D-211ENST00000589753 IGHV3-64A0A075B6Q5 118 aa9.97□□□□□ -0.81
ATG4D-211ENST00000589753 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
ATG4D-211ENST00000589753 Q8N814 137 aa9.97□□□□□ -0.81
ATG4D-211ENST00000589753 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
ATG4D-211ENST00000589753 ORAOV1Q8WV07 137 aa9.97□□□□□ -0.81
ATG4D-211ENST00000589753 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.82
ATG4D-211ENST00000589753 hDV102S1A0JD36 115 aa9.96□□□□□ -0.82
ATG4D-211ENST00000589753 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
ATG4D-211ENST00000589753 SMIM1B2RUZ4 78 aa9.95□□□□□ -0.82
ATG4D-211ENST00000589753 ZNF561-AS1K7EIQ3 104 aa9.95□□□□□ -0.82
ATG4D-211ENST00000589753 TMEM223A0PJW6 202 aa9.94□□□□□ -0.82
ATG4D-211ENST00000589753 SPAG11BQ08648 103 aa9.94□□□□□ -0.82
ATG4D-211ENST00000589753 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.93□□□□□ -0.82
ATG4D-211ENST00000589753 AKR1D1P51857 326 aa9.93□□□□□ -0.82
ATG4D-211ENST00000589753 LINC00526Q96FQ7 95 aa9.93□□□□□ -0.82
ATG4D-211ENST00000589753 TOMM7Q9P0U1 55 aa9.93□□□□□ -0.82
ATG4D-211ENST00000589753 DNAH2Q9P225 4427 aa9.93□□□□□ -0.82
ATG4D-211ENST00000589753 PRSS2P07478 247 aa9.92□□□□□ -0.82
ATG4D-211ENST00000589753 Q8IZM0 81 aa9.92□□□□□ -0.82
ATG4D-211ENST00000589753 DNAH10Q8IVF4 4471 aa9.92□□□□□ -0.82
ATG4D-211ENST00000589753 IGLV5-39A0A0G2JS06 123 aa9.91□□□□□ -0.82
ATG4D-211ENST00000589753 HERVK_113P61574 105 aa9.91□□□□□ -0.82
ATG4D-211ENST00000589753 KIAA0087Q14695 138 aa9.91□□□□□ -0.82
ATG4D-211ENST00000589753 NTN5Q8WTR8 489 aaPredicted RBP9.91□□□□□ -0.82
ATG4D-211ENST00000589753 A0A1B0GVY2 172 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 SCGB1D1O95968 90 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 C6orf226Q5I0X4 101 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 COX7B2Q8TF08 81 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 C2orf48Q96LS8 159 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 FRAS1Q86XX4 4008 aa9.9□□□□□ -0.82
ATG4D-211ENST00000589753 F8WDY8 70 aa9.89□□□□□ -0.83
ATG4D-211ENST00000589753 SLPIP03973 132 aa9.89□□□□□ -0.83
ATG4D-211ENST00000589753 KRTAP10-2P60368 255 aa9.89□□□□□ -0.83
ATG4D-211ENST00000589753 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
ATG4D-211ENST00000589753 ATOH7Q8N100 152 aa9.89□□□□□ -0.83
ATG4D-211ENST00000589753 CAMK2N2Q96S95 79 aa9.89□□□□□ -0.83
ATG4D-211ENST00000589753 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
ATG4D-211ENST00000589753 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.88□□□□□ -0.83
ATG4D-211ENST00000589753 CKS1BP61024 79 aa9.88□□□□□ -0.83
ATG4D-211ENST00000589753 SYCNQ0VAF6 134 aa9.88□□□□□ -0.83
ATG4D-211ENST00000589753 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
ATG4D-211ENST00000589753 NDUFA1O15239 70 aa9.87□□□□□ -0.83
ATG4D-211ENST00000589753 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
ATG4D-211ENST00000589753 CDPF1Q6NVV7 123 aa9.87□□□□□ -0.83
ATG4D-211ENST00000589753 STPG4Q8N801 248 aa9.87□□□□□ -0.83
ATG4D-211ENST00000589753 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
ATG4D-211ENST00000589753 DNAH17Q9UFH2 4485 aa9.87□□□□□ -0.83
ATG4D-211ENST00000589753 LEPROTO15243 131 aa9.86□□□□□ -0.83
ATG4D-211ENST00000589753 CXCL5P42830 114 aa9.86□□□□□ -0.83
ATG4D-211ENST00000589753 JOSD1Q15040 202 aaPredicted RBP9.86□□□□□ -0.83
ATG4D-211ENST00000589753 C2orf82Q6UX34 121 aa9.86□□□□□ -0.83
ATG4D-211ENST00000589753 Q6ZRU5 148 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms