RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 SMDT1Q9H4I9 107 aa9.1□□□□□ -0.95
ACTN4-211ENST00000589528 C6orf48Q9UBA6 75 aa9.1□□□□□ -0.95
ACTN4-211ENST00000589528 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
ACTN4-211ENST00000589528 RIGQ13278 110 aa9.09□□□□□ -0.95
ACTN4-211ENST00000589528 TGIF2-C20orf24A0A0A6YYL0 155 aa9.08□□□□□ -0.96
ACTN4-211ENST00000589528 IGHV3OR16-9A0A0B4J2B5 98 aa9.08□□□□□ -0.96
ACTN4-211ENST00000589528 IFITM10A6NMD0 228 aa9.08□□□□□ -0.96
ACTN4-211ENST00000589528 NRACQ8N912 160 aa9.08□□□□□ -0.96
ACTN4-211ENST00000589528 TCAPO15273 167 aa9.07□□□□□ -0.96
ACTN4-211ENST00000589528 RPL39P62891 51 aaKnown RBP9.07□□□□□ -0.96
ACTN4-211ENST00000589528 HBBP68871 147 aa9.07□□□□□ -0.96
ACTN4-211ENST00000589528 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
ACTN4-211ENST00000589528 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
ACTN4-211ENST00000589528 PACRGQ96M98 296 aaPredicted RBP9.06□□□□□ -0.96
ACTN4-211ENST00000589528 SMIM7Q9BQ49 75 aa9.06□□□□□ -0.96
ACTN4-211ENST00000589528 TRBV30A0A0K0K1B3 111 aa9.05□□□□□ -0.96
ACTN4-211ENST00000589528 KRTAP9-6A0A140TA67 174 aa9.05□□□□□ -0.96
ACTN4-211ENST00000589528 NDUFC2-KCTD14E9PQ53 114 aa9.05□□□□□ -0.96
ACTN4-211ENST00000589528 ZNF861PO60384 105 aa9.05□□□□□ -0.96
ACTN4-211ENST00000589528 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
ACTN4-211ENST00000589528 FAT4Q6V0I7 4981 aa9.04□□□□□ -0.96
ACTN4-211ENST00000589528 LINC01551Q86U37 167 aa9.04□□□□□ -0.96
ACTN4-211ENST00000589528 C20orf78Q9BR46 151 aa9.04□□□□□ -0.96
ACTN4-211ENST00000589528 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
ACTN4-211ENST00000589528 CKS2P33552 79 aa9.03□□□□□ -0.96
ACTN4-211ENST00000589528 BLOC1S1P78537 153 aa9.03□□□□□ -0.96
ACTN4-211ENST00000589528 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
ACTN4-211ENST00000589528 MRPL51Q4U2R6 128 aaKnown RBP9.03□□□□□ -0.96
ACTN4-211ENST00000589528 LINC00862A6NCI5 91 aa9.02□□□□□ -0.97
ACTN4-211ENST00000589528 NUPR1O60356 82 aa9.02□□□□□ -0.97
ACTN4-211ENST00000589528 C9orf129Q5T035 196 aaKnown RBP9.02□□□□□ -0.97
ACTN4-211ENST00000589528 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
ACTN4-211ENST00000589528 FAM104BQ5XKR9 115 aa9.02□□□□□ -0.97
ACTN4-211ENST00000589528 C2orf82Q6UX34 121 aa9.02□□□□□ -0.97
ACTN4-211ENST00000589528 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
ACTN4-211ENST00000589528 EIF5A2Q9GZV4 153 aaKnown RBP9.02□□□□□ -0.97
ACTN4-211ENST00000589528 ZNF727A8MUV8 499 aa9.01□□□□□ -0.97
ACTN4-211ENST00000589528 SMIM2Q9BVW6 85 aa9.01□□□□□ -0.97
ACTN4-211ENST00000589528 NAT8BQ9UHF3 227 aa9.01□□□□□ -0.97
ACTN4-211ENST00000589528 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
ACTN4-211ENST00000589528 CRYGAP11844 174 aa9□□□□□ -0.97
ACTN4-211ENST00000589528 IFI27P40305 119 aaPredicted RBP9□□□□□ -0.97
ACTN4-211ENST00000589528 RPL32P62910 135 aaKnown RBP9□□□□□ -0.97
ACTN4-211ENST00000589528 KIAA0087Q14695 138 aa9□□□□□ -0.97
ACTN4-211ENST00000589528 FAM104AQ969W3 186 aa9□□□□□ -0.97
ACTN4-211ENST00000589528 V9GYV3 84 aa9□□□□□ -0.97
ACTN4-211ENST00000589528 TNFRSF6BO95407 300 aa8.99□□□□□ -0.97
ACTN4-211ENST00000589528 PRSS2P07478 247 aa8.99□□□□□ -0.97
ACTN4-211ENST00000589528 RPL28P46779 137 aaKnown RBP8.99□□□□□ -0.97
ACTN4-211ENST00000589528 LBHQ53QV2 105 aaPredicted RBP8.99□□□□□ -0.97
ACTN4-211ENST00000589528 CTDSP1Q9GZU7 261 aa8.99□□□□□ -0.97
ACTN4-211ENST00000589528 RAB5AP20339 215 aa8.98□□□□□ -0.97
ACTN4-211ENST00000589528 ALKAL2Q6UX46 152 aa8.98□□□□□ -0.97
ACTN4-211ENST00000589528 LINC00469Q8N7U9 141 aa8.98□□□□□ -0.97
ACTN4-211ENST00000589528 C22orf24Q9Y442 160 aa8.98□□□□□ -0.97
ACTN4-211ENST00000589528 A0A087X002 238 aa8.97□□□□□ -0.97
ACTN4-211ENST00000589528 D6R8Y8 96 aa8.97□□□□□ -0.97
ACTN4-211ENST00000589528 CKS1BP61024 79 aa8.97□□□□□ -0.97
ACTN4-211ENST00000589528 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
ACTN4-211ENST00000589528 TOMM7Q9P0U1 55 aa8.97□□□□□ -0.97
ACTN4-211ENST00000589528 A0A1B0GW15 77 aa8.96□□□□□ -0.98
ACTN4-211ENST00000589528 FAM74A3Q4VXF1 159 aa8.96□□□□□ -0.98
ACTN4-211ENST00000589528 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
ACTN4-211ENST00000589528 CDIP1Q9H305 208 aa8.96□□□□□ -0.98
ACTN4-211ENST00000589528 F8W036 122 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 TEX43Q6ZNM6 134 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 TCTE3Q8IZS6 198 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 RETNLBQ9BQ08 111 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 C2orf88Q9BSF0 95 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 XAGE1AQ9HD64 81 aa8.95□□□□□ -0.98
ACTN4-211ENST00000589528 NPYP01303 97 aa8.94□□□□□ -0.98
ACTN4-211ENST00000589528 S100A8P05109 93 aa8.94□□□□□ -0.98
ACTN4-211ENST00000589528 C6orf226Q5I0X4 101 aa8.94□□□□□ -0.98
ACTN4-211ENST00000589528 IGLV4-3A0A075B6K6 122 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 BCE1O60756 84 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 ADIRFQ15847 76 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 Q6ZN92 141 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 MRPL55Q7Z7F7 128 aaKnown RBP8.93□□□□□ -0.98
ACTN4-211ENST00000589528 LINC01561Q8N1V8 128 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 PYGO1Q9Y3Y4 419 aa8.93□□□□□ -0.98
ACTN4-211ENST00000589528 MRPL54Q6P161 138 aaKnown RBP8.92□□□□□ -0.98
ACTN4-211ENST00000589528 SMIM27A0A1W2PRY6 76 aa8.91□□□□□ -0.98
ACTN4-211ENST00000589528 PPBPP02775 128 aa8.91□□□□□ -0.98
ACTN4-211ENST00000589528 SRP19P09132 144 aaKnown RBP8.91□□□□□ -0.98
ACTN4-211ENST00000589528 ALKBH7Q9BT30 221 aaPredicted RBP8.91□□□□□ -0.98
ACTN4-211ENST00000589528 ANAPC11Q9NYG5 84 aa8.91□□□□□ -0.98
ACTN4-211ENST00000589528 TP73-AS1Q9UF72 201 aa8.91□□□□□ -0.98
ACTN4-211ENST00000589528 RPL23P62829 140 aaKnown RBP8.9□□□□□ -0.98
ACTN4-211ENST00000589528 Q8IZM0 81 aa8.9□□□□□ -0.98
ACTN4-211ENST00000589528 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
ACTN4-211ENST00000589528 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
ACTN4-211ENST00000589528 UBE2AP49459 152 aa8.89□□□□□ -0.99
ACTN4-211ENST00000589528 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
ACTN4-211ENST00000589528 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
ACTN4-211ENST00000589528 TPRXLQ17RH7 258 aa8.88□□□□□ -0.99
ACTN4-211ENST00000589528 PRELID3AQ96N28 172 aa8.88□□□□□ -0.99
ACTN4-211ENST00000589528 VCX2Q9H322 139 aa8.88□□□□□ -0.99
ACTN4-211ENST00000589528 IGLV7-46A0A075B6I9 117 aa8.87□□□□□ -0.99
ACTN4-211ENST00000589528 F8VRH5 84 aa8.87□□□□□ -0.99
ACTN4-211ENST00000589528 TMEM136Q6ZRR5 245 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms