RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LECT2O14960 151 aa12.89□□□□□ -0.35
CIRBP-220ENST00000588917 LINC00242Q5T6M2 205 aa12.89□□□□□ -0.35
CIRBP-220ENST00000588917 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
CIRBP-220ENST00000588917 FAM19A2Q8N3H0 131 aa12.89□□□□□ -0.35
CIRBP-220ENST00000588917 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
CIRBP-220ENST00000588917 MALP21145 153 aa12.88□□□□□ -0.35
CIRBP-220ENST00000588917 CDPF1Q6NVV7 123 aa12.88□□□□□ -0.35
CIRBP-220ENST00000588917 SPATA12Q7Z6I5 190 aa12.88□□□□□ -0.35
CIRBP-220ENST00000588917 RYR1P21817 5038 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 IGHV3OR16-9A0A0B4J2B5 98 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 IGHV1-58A0A0C4DH39 117 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 APOMO95445 188 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 PRSS1P07477 247 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 LINC00310P59036 64 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 HERVK_113P63121 156 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 ZC2HC1BQ5TFG8 222 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
CIRBP-220ENST00000588917 NUPR1O60356 82 aa12.86□□□□□ -0.35
CIRBP-220ENST00000588917 NDUFA6P56556 154 aa12.86□□□□□ -0.35
CIRBP-220ENST00000588917 WFDC2Q14508 124 aa12.86□□□□□ -0.35
CIRBP-220ENST00000588917 COA6Q5JTJ3 125 aaKnown RBP12.86□□□□□ -0.35
CIRBP-220ENST00000588917 GEMIN7Q9H840 131 aaKnown RBP12.86□□□□□ -0.35
CIRBP-220ENST00000588917 HSPB8Q9UJY1 196 aa12.86□□□□□ -0.35
CIRBP-220ENST00000588917 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
CIRBP-220ENST00000588917 PKD1P98161 4303 aa12.85□□□□□ -0.35
CIRBP-220ENST00000588917 TINCRA0A1B0GVN0 87 aa12.84□□□□□ -0.35
CIRBP-220ENST00000588917 LINC01561Q8N1V8 128 aa12.84□□□□□ -0.35
CIRBP-220ENST00000588917 A0A087WZ39 114 aa12.83□□□□□ -0.36
CIRBP-220ENST00000588917 hDV102S1A0JD36 115 aa12.83□□□□□ -0.36
CIRBP-220ENST00000588917 PACRGQ96M98 296 aaPredicted RBP12.83□□□□□ -0.36
CIRBP-220ENST00000588917 IGLV5-52A0A0A0MRZ9 124 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 A0A0J9YXV3 536 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 ZNF561-AS1K7EIQ3 104 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 KRTAP10-2P60368 255 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 COX6A2Q02221 97 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 C15orf56Q8N910 161 aa12.82□□□□□ -0.36
CIRBP-220ENST00000588917 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.81□□□□□ -0.36
CIRBP-220ENST00000588917 GVQW2A0A096LPI5 108 aaPredicted RBP12.81□□□□□ -0.36
CIRBP-220ENST00000588917 TRAV12-1A0A0B4J245 112 aa12.81□□□□□ -0.36
CIRBP-220ENST00000588917 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
CIRBP-220ENST00000588917 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.8□□□□□ -0.36
CIRBP-220ENST00000588917 FABP4P15090 132 aa12.8□□□□□ -0.36
CIRBP-220ENST00000588917 OR10D4PQ8NGN7 298 aa12.8□□□□□ -0.36
CIRBP-220ENST00000588917 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
CIRBP-220ENST00000588917 C16orf90A8MZG2 172 aa12.79□□□□□ -0.36
CIRBP-220ENST00000588917 CHTOPQ9Y3Y2 248 aaKnown RBP12.79□□□□□ -0.36
CIRBP-220ENST00000588917 IGLC3P0DOY3 106 aa12.78□□□□□ -0.36
CIRBP-220ENST00000588917 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
CIRBP-220ENST00000588917 MAP1LC3CQ9BXW4 147 aa12.78□□□□□ -0.36
CIRBP-220ENST00000588917 DYNC1H1Q14204 4646 aaKnown RBP12.77□□□□□ -0.36
CIRBP-220ENST00000588917 F8WDY8 70 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 H3BRM9 83 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 S100A6P06703 90 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 GCSHP23434 173 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 LINC00469Q8N7U9 141 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 CDKN2A-AS1Q9UH64 79 aa12.77□□□□□ -0.37
CIRBP-220ENST00000588917 IGLV5-45A0A087WSX0 123 aa12.76□□□□□ -0.37
CIRBP-220ENST00000588917 ORAOV1Q8WV07 137 aa12.75□□□□□ -0.37
CIRBP-220ENST00000588917 C2orf48Q96LS8 159 aa12.75□□□□□ -0.37
CIRBP-220ENST00000588917 CHAC1Q9BUX1 264 aa12.75□□□□□ -0.37
CIRBP-220ENST00000588917 F8VRH5 84 aa12.74□□□□□ -0.37
CIRBP-220ENST00000588917 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
CIRBP-220ENST00000588917 SPAG11BQ08648 103 aa12.73□□□□□ -0.37
CIRBP-220ENST00000588917 C9orf163Q8N9P6 203 aa12.73□□□□□ -0.37
CIRBP-220ENST00000588917 ABCA13Q86UQ4 5058 aa12.72□□□□□ -0.37
CIRBP-220ENST00000588917 PRSS2P07478 247 aa12.72□□□□□ -0.37
CIRBP-220ENST00000588917 H0Y8G0 127 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 FUSP35637 526 aaKnown RBP eCLIP12.71□□□□□ -0.37
CIRBP-220ENST00000588917 SYCNQ0VAF6 134 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 CAMK2N2Q96S95 79 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 MRPL35Q9NZE8 188 aaKnown RBP12.71□□□□□ -0.37
CIRBP-220ENST00000588917 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.37
CIRBP-220ENST00000588917 SLPIP03973 132 aa12.7□□□□□ -0.38
CIRBP-220ENST00000588917 S100A2P29034 98 aa12.7□□□□□ -0.38
CIRBP-220ENST00000588917 ODF1Q14990 250 aa12.7□□□□□ -0.38
CIRBP-220ENST00000588917 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
CIRBP-220ENST00000588917 ZNF22P17026 224 aaPredicted RBP12.69□□□□□ -0.38
CIRBP-220ENST00000588917 PLNP26678 52 aa12.69□□□□□ -0.38
CIRBP-220ENST00000588917 Q8IZM0 81 aa12.69□□□□□ -0.38
CIRBP-220ENST00000588917 LINC00526Q96FQ7 95 aa12.69□□□□□ -0.38
CIRBP-220ENST00000588917 C11orf86A6NJI1 115 aa12.68□□□□□ -0.38
CIRBP-220ENST00000588917 SMIM1B2RUZ4 78 aa12.68□□□□□ -0.38
CIRBP-220ENST00000588917 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
CIRBP-220ENST00000588917 NDUFA1O15239 70 aa12.68□□□□□ -0.38
CIRBP-220ENST00000588917 CARD19Q96LW7 228 aa12.68□□□□□ -0.38
CIRBP-220ENST00000588917 CKS1BP61024 79 aa12.67□□□□□ -0.38
CIRBP-220ENST00000588917 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
CIRBP-220ENST00000588917 RNF151Q2KHN1 245 aa12.67□□□□□ -0.38
CIRBP-220ENST00000588917 PET117Q6UWS5 81 aa12.67□□□□□ -0.38
CIRBP-220ENST00000588917 TOMM7Q9P0U1 55 aa12.67□□□□□ -0.38
CIRBP-220ENST00000588917 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
CIRBP-220ENST00000588917 DPM2O94777 84 aa12.66□□□□□ -0.38
CIRBP-220ENST00000588917 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
CIRBP-220ENST00000588917 CXCL5P42830 114 aa12.65□□□□□ -0.38
CIRBP-220ENST00000588917 KRTAP10-1P60331 282 aa12.65□□□□□ -0.38
CIRBP-220ENST00000588917 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms