RNA–Protein interactions for RNA: ENST00000588904.1

LINC01535-203, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 3

Gene LINC01535, Length 257 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-203ENST00000588904 CREBBPQ92793 2442 aa-0.54□□□□□ -2.5
LINC01535-203ENST00000588904 CNOT1A5YKK6 2376 aaKnown RBP-0.54□□□□□ -2.5
LINC01535-203ENST00000588904 CFTRP13569 1480 aa-0.54□□□□□ -2.5
LINC01535-203ENST00000588904 CHD8Q9HCK8 2581 aa-0.54□□□□□ -2.5
LINC01535-203ENST00000588904 NSD3Q9BZ95 1437 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 LRRC37A2A6NM11 1700 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 KIF21AQ7Z4S6 1674 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 SVEP1Q4LDE5 3571 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 LINC00959A0A1B0GUT2 108 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 SPINK4O60575 86 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 APOC2P02655 101 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 C5orf38Q86SI9 138 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 DEFB123Q8N688 67 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 TMEM263Q8WUH6 116 aaKnown RBP-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 NXT2Q9NPJ8 142 aaKnown RBP-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 FOCADQ5VW36 1801 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 GRIN2AQ12879 1464 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 PXDNQ92626 1479 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 WDR7Q9Y4E6 1490 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 PRKDCP78527 4128 aaKnown RBP-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 COL6A3P12111 3177 aa-0.55□□□□□ -2.5
LINC01535-203ENST00000588904 FAT1Q14517 4588 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 FLNBO75369 2602 aaKnown RBP-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 ATRQ13535 2644 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 M0R2T5 61 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 IFNGP01579 166 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 COMMD6Q7Z4G1 85 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 FAM223AQ8IWN6 122 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 SPRR4Q96PI1 79 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 DNAJC13O75165 2243 aa-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 CPSF1Q10570 1443 aaKnown RBP-0.56□□□□□ -2.5
LINC01535-203ENST00000588904 ABCA13Q86UQ4 5058 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 BICRAQ9NZM4 1560 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 LOC285095A0A1B0GVY8 99 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 SSSCA1O60232 199 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 MGPP08493 103 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 AKAIN1P0CW23 69 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 KRTAP19-8Q3LI54 63 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 C8orf59Q8N0T1 100 aaPredicted RBP-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 MYOZ3Q8TDC0 251 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 LINC01600Q96MT4 127 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 DPH3P1Q9H4G8 78 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 FAIMQ9NVQ4 179 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 SPTA1P02549 2419 aa-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 EP300Q09472 2414 aaPredicted RBP-0.57□□□□□ -2.5
LINC01535-203ENST00000588904 SONP18583 2426 aaKnown RBP-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 SHANK2Q9UPX8 1470 aa-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 CPSF4LA6NMK7 179 aaKnown RBP-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 SNAPC5O75971 98 aa-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 GNG11P61952 73 aa-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 MANBALQ9NQG1 85 aa-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 CDC42SE2Q9NRR3 84 aa-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 PAIP2BQ9ULR5 123 aaKnown RBP-0.58□□□□□ -2.5
LINC01535-203ENST00000588904 TRBV7-4A0A0J9YYF1 115 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 K7EP13 123 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 BTG2P78543 158 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 KRTAP6-2Q3LI66 62 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 C9orf153Q5TBE3 101 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 TSC22D3Q99576 134 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 MYOM3Q5VTT5 1437 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 PHLPP1O60346 1717 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 ARHGEF12Q9NZN5 1544 aa-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 RIMS1Q86UR5 1692 aaKnown RBP-0.59□□□□□ -2.5
LINC01535-203ENST00000588904 SETXQ7Z333 2677 aaKnown RBP-0.6□□□□□ -2.5
LINC01535-203ENST00000588904 MBD5Q9P267 1494 aa-0.6□□□□□ -2.5
LINC01535-203ENST00000588904 SYS1-DBNDD2H3BUS1 97 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 FGF7P21781 194 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 PP6455Q8WZ26 134 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 UQCR10Q9UDW1 63 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 KDM5AP29375 1690 aaKnown RBP-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 ROBO1Q9Y6N7 1651 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 HMGXB3Q12766 1538 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 NF1P21359 2839 aa-0.6□□□□□ -2.51
LINC01535-203ENST00000588904 LAMA5O15230 3695 aa-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 MT4P47944 62 aa-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 Q0VG73 95 aa-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 ROCK2O75116 1388 aaKnown RBP-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 GAPVD1Q14C86 1478 aa-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 STAB2Q8WWQ8 2551 aa-0.61□□□□□ -2.51
LINC01535-203ENST00000588904 HECTD1Q9ULT8 2610 aa-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 MAP1AP78559 2803 aaPredicted RBP-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 FAM223BA6NKX1 122 aa-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 TRAPPC2P0DI81 140 aa-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 TRAPPC2BP0DI82 140 aa-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 FLGP20930 4061 aaPredicted RBP-0.62□□□□□ -2.51
LINC01535-203ENST00000588904 FMN2Q9NZ56 1722 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 TCHHQ07283 1943 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 UBE2L5PA0A1B0GUS4 154 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 A0A1B0GV90 55 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 A0A1B0GWA3 101 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 FAM24AA6NFZ4 105 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 SEC11AP67812 179 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 UBE2L3P68036 154 aaKnown RBP-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 WHAMMP3Q1A5X7 153 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 H1FX-AS1Q4G0G2 97 aa-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 DSPP15924 2871 aaKnown RBP-0.63□□□□□ -2.51
LINC01535-203ENST00000588904 NBEAL1Q6ZS30 2694 aa-0.64□□□□□ -2.51
LINC01535-203ENST00000588904 TET3O43151 1660 aa-0.64□□□□□ -2.51
LINC01535-203ENST00000588904 COX8AP10176 69 aa-0.64□□□□□ -2.51
LINC01535-203ENST00000588904 SNCAP37840 140 aa-0.64□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms