RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 LINC01545Q5VT33 79 aa15.18■□□□□ 0.02
ACTN4-210ENST00000588618 CHAC1Q9BUX1 264 aa15.18■□□□□ 0.02
ACTN4-210ENST00000588618 TINCRA0A1B0GVN0 87 aa15.17■□□□□ 0.02
ACTN4-210ENST00000588618 PLNP26678 52 aa15.17■□□□□ 0.02
ACTN4-210ENST00000588618 COX11Q9Y6N1 276 aa15.17■□□□□ 0.02
ACTN4-210ENST00000588618 LCE6AA0A183 80 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 DPM2O94777 84 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 SCGB1D1O95968 90 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 IGLC3P0DOY3 106 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 CD164L2Q6UWJ8 174 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 FAM19A3Q7Z5A8 133 aa15.16■□□□□ 0.02
ACTN4-210ENST00000588618 KMT2CQ8NEZ4 4911 aaKnown RBP15.15■□□□□ 0.02
ACTN4-210ENST00000588618 NFE4Q86UQ8 179 aa15.15■□□□□ 0.02
ACTN4-210ENST00000588618 TM2D2Q9BX73 214 aa15.15■□□□□ 0.02
ACTN4-210ENST00000588618 COX6A2Q02221 97 aa15.14■□□□□ 0.01
ACTN4-210ENST00000588618 LINC00469Q8N7U9 141 aa15.14■□□□□ 0.01
ACTN4-210ENST00000588618 GAGE12HA6NDE8 117 aa15.14■□□□□ 0.01
ACTN4-210ENST00000588618 IGKCP01834 107 aa15.14■□□□□ 0.01
ACTN4-210ENST00000588618 Q6ZR54 194 aa15.14■□□□□ 0.01
ACTN4-210ENST00000588618 C11orf86A6NJI1 115 aa15.13■□□□□ 0.01
ACTN4-210ENST00000588618 PYY3Q5JQD4 70 aa15.13■□□□□ 0.01
ACTN4-210ENST00000588618 TMEM170BQ5T4T1 132 aa15.13■□□□□ 0.01
ACTN4-210ENST00000588618 PSCAO43653 123 aa15.12■□□□□ 0.01
ACTN4-210ENST00000588618 JOSD1Q15040 202 aaPredicted RBP15.12■□□□□ 0.01
ACTN4-210ENST00000588618 H3BRM9 83 aa15.11■□□□□ 0.01
ACTN4-210ENST00000588618 COX7A2LO14548 114 aa15.11■□□□□ 0.01
ACTN4-210ENST00000588618 IGHV3OR16-9A0A0B4J2B5 98 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 MALP21145 153 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 FOXI1Q12951 378 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 KRTAP26-1Q6PEX3 210 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 C5orf38Q86SI9 138 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 ATOH7Q8N100 152 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 C6orf223Q8N319 242 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 CDKN2A-AS1Q9UH64 79 aa15.1■□□□□ 0.01
ACTN4-210ENST00000588618 ZNF22P17026 224 aaPredicted RBP15.09■□□□□ 0.01
ACTN4-210ENST00000588618 C1orf134Q5TEV5 83 aa15.09■□□□□ 0.01
ACTN4-210ENST00000588618 CDPF1Q6NVV7 123 aa15.09■□□□□ 0.01
ACTN4-210ENST00000588618 IGLV5-45A0A087WSX0 123 aa15.07■□□□□ 0
ACTN4-210ENST00000588618 DNAH17Q9UFH2 4485 aa15.07■□□□□ 0
ACTN4-210ENST00000588618 A0A087WZ39 114 aa15.06■□□□□ 0
ACTN4-210ENST00000588618 HERVK_113P61574 105 aa15.05■□□□□ -0
ACTN4-210ENST00000588618 RYR2Q92736 4967 aa15.05■□□□□ -0
ACTN4-210ENST00000588618 FRAS1Q86XX4 4008 aa15.05■□□□□ -0
ACTN4-210ENST00000588618 APOMO95445 188 aa15.04■□□□□ -0
ACTN4-210ENST00000588618 MAJINQ3KP22 176 aa15.03■□□□□ -0
ACTN4-210ENST00000588618 HSBP1L1C9JCN9 74 aa15.03■□□□□ -0
ACTN4-210ENST00000588618 SPINK8P0C7L1 97 aa15.03■□□□□ -0
ACTN4-210ENST00000588618 CFAP161Q6P656 301 aa15.02□□□□□ -0.01
ACTN4-210ENST00000588618 LINC01561Q8N1V8 128 aa15.02□□□□□ -0.01
ACTN4-210ENST00000588618 MAPKAPK5-AS1Q8N8E1 139 aa15.01□□□□□ -0.01
ACTN4-210ENST00000588618 IGHV3-64A0A075B6Q5 118 aa15□□□□□ -0.01
ACTN4-210ENST00000588618 hDV102S1A0JD36 115 aa15□□□□□ -0.01
ACTN4-210ENST00000588618 TMEM223A0PJW6 202 aa15□□□□□ -0.01
ACTN4-210ENST00000588618 STPG4Q8N801 248 aa15□□□□□ -0.01
ACTN4-210ENST00000588618 Q6ZRN7 208 aaPredicted RBP15□□□□□ -0.01
ACTN4-210ENST00000588618 IGHV1-58A0A0C4DH39 117 aa14.99□□□□□ -0.01
ACTN4-210ENST00000588618 SMIM1B2RUZ4 78 aa14.99□□□□□ -0.01
ACTN4-210ENST00000588618 ORAOV1Q8WV07 137 aa14.98□□□□□ -0.01
ACTN4-210ENST00000588618 PRSS2P07478 247 aa14.97□□□□□ -0.01
ACTN4-210ENST00000588618 TOMM7Q9P0U1 55 aa14.97□□□□□ -0.01
ACTN4-210ENST00000588618 USP17L23D6RBM5 183 aa14.96□□□□□ -0.01
ACTN4-210ENST00000588618 LECT2O14960 151 aa14.96□□□□□ -0.01
ACTN4-210ENST00000588618 ANKRD39Q53RE8 183 aa14.96□□□□□ -0.01
ACTN4-210ENST00000588618 FAT2Q9NYQ8 4349 aa14.96□□□□□ -0.02
ACTN4-210ENST00000588618 ZNF561-AS1K7EIQ3 104 aa14.95□□□□□ -0.02
ACTN4-210ENST00000588618 VAMP8Q9BV40 100 aa14.95□□□□□ -0.02
ACTN4-210ENST00000588618 SMIM6P0DI80 62 aa14.94□□□□□ -0.02
ACTN4-210ENST00000588618 SPAG11BQ08648 103 aa14.94□□□□□ -0.02
ACTN4-210ENST00000588618 IGLV5-39A0A0G2JS06 123 aa14.93□□□□□ -0.02
ACTN4-210ENST00000588618 E9PLD3 99 aa14.93□□□□□ -0.02
ACTN4-210ENST00000588618 HIGD2BQ4VC39 106 aa14.93□□□□□ -0.02
ACTN4-210ENST00000588618 C14orf177Q52M58 125 aa14.93□□□□□ -0.02
ACTN4-210ENST00000588618 C15orf56Q8N910 161 aa14.93□□□□□ -0.02
ACTN4-210ENST00000588618 IGKV2D-26A0A0A0MRZ7 120 aa14.92□□□□□ -0.02
ACTN4-210ENST00000588618 C6orf226Q5I0X4 101 aa14.92□□□□□ -0.02
ACTN4-210ENST00000588618 COX7B2Q8TF08 81 aa14.92□□□□□ -0.02
ACTN4-210ENST00000588618 S100A12P80511 92 aa14.92□□□□□ -0.02
ACTN4-210ENST00000588618 PLEKHB2Q96CS7 222 aa14.92□□□□□ -0.02
ACTN4-210ENST00000588618 LEPROTO15243 131 aa14.91□□□□□ -0.02
ACTN4-210ENST00000588618 WFDC2Q14508 124 aa14.91□□□□□ -0.02
ACTN4-210ENST00000588618 Q8IZM0 81 aa14.91□□□□□ -0.02
ACTN4-210ENST00000588618 PAM16Q9Y3D7 125 aa14.91□□□□□ -0.02
ACTN4-210ENST00000588618 GVQW2A0A096LPI5 108 aaPredicted RBP14.9□□□□□ -0.02
ACTN4-210ENST00000588618 LGALS3P17931 250 aaKnown RBP14.9□□□□□ -0.02
ACTN4-210ENST00000588618 NMUP48645 174 aa14.9□□□□□ -0.02
ACTN4-210ENST00000588618 TSPEAR-AS2P59090 65 aa14.9□□□□□ -0.02
ACTN4-210ENST00000588618 DNAH11Q96DT5 4516 aa14.9□□□□□ -0.02
ACTN4-210ENST00000588618 RYR3Q15413 4870 aa14.9□□□□□ -0.02
ACTN4-210ENST00000588618 CKS1BP61024 79 aa14.89□□□□□ -0.03
ACTN4-210ENST00000588618 J3QQQ9 107 aa14.89□□□□□ -0.03
ACTN4-210ENST00000588618 LRCOL1A6NCL2 159 aa14.88□□□□□ -0.03
ACTN4-210ENST00000588618 EREGO14944 169 aa14.88□□□□□ -0.03
ACTN4-210ENST00000588618 RTL8CO15255 209 aa14.88□□□□□ -0.03
ACTN4-210ENST00000588618 SPATA45Q537H7 98 aa14.87□□□□□ -0.03
ACTN4-210ENST00000588618 LINC00526Q96FQ7 95 aa14.87□□□□□ -0.03
ACTN4-210ENST00000588618 A0A087WTM6 91 aa14.86□□□□□ -0.03
ACTN4-210ENST00000588618 CXCL5P42830 114 aa14.86□□□□□ -0.03
ACTN4-210ENST00000588618 KIAA0087Q14695 138 aa14.86□□□□□ -0.03
ACTN4-210ENST00000588618 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
ACTN4-210ENST00000588618 CAMK2N2Q96S95 79 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms