RNA–Protein interactions for RNA: ENST00000588236.1

SPIRE1-212, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2

Gene SPIRE1, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-212ENST00000588236 LINC00477Q96M19 166 aa2.03□□□□□ -2.08
SPIRE1-212ENST00000588236 C18orf15Q96N68 181 aa2.03□□□□□ -2.08
SPIRE1-212ENST00000588236 DAZ1Q9NQZ3 744 aaKnown RBP2.03□□□□□ -2.08
SPIRE1-212ENST00000588236 PEF1Q9UBV8 284 aaKnown RBP2.03□□□□□ -2.08
SPIRE1-212ENST00000588236 IGKV3-7A0A075B6H7 116 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 IGKV2D-26A0A0A0MRZ7 120 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV25A0A0B4J276 109 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV21A0A0B4J279 112 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 HSBP1L1C9JCN9 74 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 RTL8CO15255 209 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 CCL25O15444 150 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 SMIM17P0DL12 118 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 RNASE4P34096 147 aaKnown RBP2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 KRTAP13-3Q3SY46 172 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 SPANXN1Q5VSR9 72 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 AMTNQ6UX39 209 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 BOD1L2Q8IYS8 172 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 OR9G4Q8NGQ1 327 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 OR2K2Q8NGT1 345 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 ORAOV1Q8WV07 137 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 RPL39LQ96EH5 51 aaKnown RBP2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 MRAP2Q96G30 205 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 SMIM2Q9BVW6 85 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 NXT2Q9NPJ8 142 aaKnown RBP2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 VPREB3Q9UKI3 123 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 HHLA3Q9XRX5 114 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 UFC1Q9Y3C8 167 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 CMYA5Q8N3K9 4069 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 HERC1Q15751 4861 aa2.02□□□□□ -2.09
SPIRE1-212ENST00000588236 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 A0A087WX48 190 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV12-3A0A0B4J271 114 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 A0A0J9YX75 114 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 TMEM223A0PJW6 202 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 C7orf71A4D174 169 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 A8MTW9 85 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 M0R381 172 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 LGALS9O00182 355 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 BPY2O14599 106 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 SIVA1O15304 175 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 LGALS1P09382 135 aaKnown RBP2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 ASIPP42127 132 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 SYNJ2BPP57105 145 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 TCTAP57738 103 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 RBMY1FQ15415 496 aaKnown RBP2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 TMEM97Q5BJF2 176 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 PSMG4Q5JS54 123 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 MORN3Q6PF18 240 aaPredicted RBP2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 SMIM15Q7Z3B0 74 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 Q8N2B8 174 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 ODF3Q96PU9 254 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 C20orf78Q9BR46 151 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 DPH3P1Q9H4G8 78 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 PHLDA3Q9Y5J5 127 aa2.01□□□□□ -2.09
SPIRE1-212ENST00000588236 COL7A1Q02388 2944 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV12-2A0A075B6T6 113 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV12-1A0A0B4J245 112 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV8-6A0A0B4J262 113 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 DPM2O94777 84 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 IGKCP01834 107 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 CRYGDP07320 174 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 MGPP08493 103 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 CD7P09564 240 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TLX1NBP0CAT3 122 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 HLA-DRB4P13762 266 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 S100A4P26447 101 aaKnown RBP2□□□□□ -2.09
SPIRE1-212ENST00000588236 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
SPIRE1-212ENST00000588236 HSD52Q0P140 79 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 SPINK13Q1W4C9 94 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 DEFB136Q30KP8 78 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 KPRPQ5T749 579 aaPredicted RBP2□□□□□ -2.09
SPIRE1-212ENST00000588236 SAMD13Q5VXD3 122 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 NEGR1Q7Z3B1 354 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 MRPL55Q7Z7F7 128 aaKnown RBP2□□□□□ -2.09
SPIRE1-212ENST00000588236 BAALCQ8WXS3 180 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TOMM6Q96B49 74 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 UBE2E2Q96LR5 201 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 AP1S3Q96PC3 154 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TIMM17AQ99595 171 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 RETNQ9HD89 108 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 HIGD1BQ9P298 99 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 HLA-DRB4X5D2U9 266 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 SORL1Q92673 2214 aa2□□□□□ -2.09
SPIRE1-212ENST00000588236 TRBV25-1A0A075B6N4 114 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 TRAV2A0A0B4J234 112 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 TRBV6-5A0A0K0K1A5 114 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 A0A0U1RQV1 116 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 IGIPA6NJ69 53 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 KNCNA6PVL3 124 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 F8VRH5 84 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 H3BMM0 161 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 H3BRM9 83 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 H7C1H1 209 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 K7EMI3 77 aa1.99□□□□□ -2.09
SPIRE1-212ENST00000588236 K7EP13 123 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms