RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 LRCOL1A6NCL2 159 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 A6NED7 52 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 C19orf84I3L1E1 186 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 LECT2O14960 151 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 MGPP08493 103 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
LINC01538-201ENST00000588074 FBXL19-AS1Q494R0 122 aa3.85□□□□□ -1.79
LINC01538-201ENST00000588074 ZFHX3Q15911 3703 aa3.84□□□□□ -1.79
LINC01538-201ENST00000588074 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
LINC01538-201ENST00000588074 HAMPP81172 84 aa3.84□□□□□ -1.79
LINC01538-201ENST00000588074 ARFGEF3Q5TH69 2177 aa3.84□□□□□ -1.79
LINC01538-201ENST00000588074 LINC00574Q9H8X3 128 aa3.84□□□□□ -1.79
LINC01538-201ENST00000588074 IGHV3-15A0A0B4J1V0 119 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 CGB3P0DN86 165 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 CGB7P0DN87 165 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 SCXQ7RTU7 201 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 Q8N9P0 234 aaPredicted RBP3.84□□□□□ -1.8
LINC01538-201ENST00000588074 C20orf203Q8NBC4 194 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 Q8NBF4 154 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 PRR15LQ9BU68 103 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 ZNF706Q9Y5V0 76 aaPredicted RBP3.84□□□□□ -1.8
LINC01538-201ENST00000588074 F5P12259 2224 aa3.84□□□□□ -1.8
LINC01538-201ENST00000588074 LY6HO94772 140 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 IGKV1-17P01599 117 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 PRB4P10163 310 aaPredicted RBP3.83□□□□□ -1.8
LINC01538-201ENST00000588074 Q6ZQT0 140 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 TMEM105Q8N8V8 129 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 HIGD2AQ9BW72 106 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 LENEPQ9Y5L5 61 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 CASC2Q6XLA1 102 aa3.83□□□□□ -1.8
LINC01538-201ENST00000588074 NDUFB1O75438 58 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 SMIM11BQ8TCY0 68 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 ZCCHC13Q8WW36 166 aaKnown RBP3.82□□□□□ -1.8
LINC01538-201ENST00000588074 LEAP2Q969E1 77 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 Q9BRP9 147 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 MED13Q9UHV7 2174 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 FRYLO94915 3013 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 H3BQ85 93 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 I3L2K1 104 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 RPL36AP83881 106 aaKnown RBP3.82□□□□□ -1.8
LINC01538-201ENST00000588074 C9orf47Q6ZRZ4 202 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 FDCSPQ8NFU4 85 aa3.82□□□□□ -1.8
LINC01538-201ENST00000588074 RPL27AP46776 148 aaKnown RBP3.81□□□□□ -1.8
LINC01538-201ENST00000588074 C10orf55Q5SWW7 151 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 ZDBF2Q9HCK1 2354 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 LAMA1P25391 3075 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 IGLV2-23P01705 113 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 LINC00315P59091 139 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 EGFEM1PQ0D2K5 195 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
LINC01538-201ENST00000588074 BDP1A6H8Y1 2624 aa3.81□□□□□ -1.8
LINC01538-201ENST00000588074 TECTAO75443 2155 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 MRPS21P82921 87 aaKnown RBP3.8□□□□□ -1.8
LINC01538-201ENST00000588074 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 CSNK1G2-AS1Q8NCQ2 148 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 CELA1Q9UNI1 258 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 RTTNQ86VV8 2226 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 SDK1Q7Z5N4 2213 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 FSHBP01225 129 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 DEFB114Q30KQ6 69 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 Q6ZTI0 123 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 PI4KAP42356 2102 aa3.8□□□□□ -1.8
LINC01538-201ENST00000588074 KLK9Q9UKQ9 250 aa3.79□□□□□ -1.8
LINC01538-201ENST00000588074 LY6G6DO95868 133 aa3.79□□□□□ -1.8
LINC01538-201ENST00000588074 KRTAP10-2P60368 255 aa3.79□□□□□ -1.8
LINC01538-201ENST00000588074 ZGRF1Q86YA3 2104 aa3.79□□□□□ -1.8
LINC01538-201ENST00000588074 RETNLBQ9BQ08 111 aa3.79□□□□□ -1.8
LINC01538-201ENST00000588074 IGKV2-28A0A075B6P5 120 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 IGKV3D-15A0A087WSY6 115 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 IGHV3-21A0A0B4J1V1 117 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 IGHV3-35A0A0C4DH35 117 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 IGKV2D-28P01615 120 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 Q8N814 137 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 CUL9Q8IWT3 2517 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 NCOR1O75376 2440 aa3.78□□□□□ -1.8
LINC01538-201ENST00000588074 SLPIP03973 132 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 MRGPRG-AS1Q2M3A8 158 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 KRTAP15-1Q3LI76 137 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 NTM-AS1Q6ZSK4 140 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 SPANXA2-OT1Q8N9U9 137 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.81
LINC01538-201ENST00000588074 WDFY3Q8IZQ1 3526 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 ASPMQ8IZT6 3477 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 WDR87Q6ZQQ6 2873 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 IGHV7-81A0A0B4J1V7 117 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 PINLYPA6NC86 204 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 K7EIM0 57 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 MRPL33O75394 65 aaKnown RBP3.77□□□□□ -1.81
LINC01538-201ENST00000588074 CHTF8P0CG12 524 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 B9D2Q9BPU9 175 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 CELSR3Q9NYQ7 3312 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 PRR14LQ5THK1 2151 aa3.77□□□□□ -1.81
LINC01538-201ENST00000588074 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
LINC01538-201ENST00000588074 SRRM5B3KS81 715 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
LINC01538-201ENST00000588074 NANOS2P60321 138 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms