RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 C20orf78Q9BR46 151 aa8.62□□□□□ -1.03
ERCC1-205ENST00000587888 MRPL35Q9NZE8 188 aaKnown RBP8.62□□□□□ -1.03
ERCC1-205ENST00000587888 NDUFA1O15239 70 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 TNFRSF6BO95407 300 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 ADIRFQ15847 76 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 FAM74A3Q4VXF1 159 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 KRTAP11-1Q8IUC1 163 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 DIRC1Q969H9 104 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
ERCC1-205ENST00000587888 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
ERCC1-205ENST00000587888 IGHV3OR16-9A0A0B4J2B5 98 aa8.6□□□□□ -1.03
ERCC1-205ENST00000587888 SMIM27A0A1W2PRY6 76 aa8.6□□□□□ -1.03
ERCC1-205ENST00000587888 TCAPO15273 167 aa8.6□□□□□ -1.03
ERCC1-205ENST00000587888 FAM19A5Q7Z5A7 132 aaPredicted RBP8.6□□□□□ -1.03
ERCC1-205ENST00000587888 IFITM10A6NMD0 228 aa8.59□□□□□ -1.03
ERCC1-205ENST00000587888 F8WDY8 70 aa8.59□□□□□ -1.03
ERCC1-205ENST00000587888 SMIM2Q9BVW6 85 aa8.59□□□□□ -1.03
ERCC1-205ENST00000587888 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
ERCC1-205ENST00000587888 D6R8Y8 96 aa8.58□□□□□ -1.04
ERCC1-205ENST00000587888 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
ERCC1-205ENST00000587888 HBBP68871 147 aa8.58□□□□□ -1.04
ERCC1-205ENST00000587888 C6orf48Q9UBA6 75 aa8.58□□□□□ -1.04
ERCC1-205ENST00000587888 A0A1B0GW15 77 aa8.57□□□□□ -1.04
ERCC1-205ENST00000587888 C9JQL5 133 aa8.57□□□□□ -1.04
ERCC1-205ENST00000587888 H0Y9J4 135 aa8.57□□□□□ -1.04
ERCC1-205ENST00000587888 NPYP01303 97 aa8.57□□□□□ -1.04
ERCC1-205ENST00000587888 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
ERCC1-205ENST00000587888 MRPL54Q6P161 138 aaKnown RBP8.57□□□□□ -1.04
ERCC1-205ENST00000587888 NAT8Q9UHE5 227 aa8.57□□□□□ -1.04
ERCC1-205ENST00000587888 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
ERCC1-205ENST00000587888 F8W036 122 aa8.56□□□□□ -1.04
ERCC1-205ENST00000587888 TLX1NBP0CAT3 122 aa8.56□□□□□ -1.04
ERCC1-205ENST00000587888 UBE2BP63146 152 aa8.56□□□□□ -1.04
ERCC1-205ENST00000587888 RAB5AP20339 215 aa8.55□□□□□ -1.04
ERCC1-205ENST00000587888 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
ERCC1-205ENST00000587888 KRTAP7-1Q8IUC3 87 aa8.55□□□□□ -1.04
ERCC1-205ENST00000587888 SMDT1Q9H4I9 107 aa8.55□□□□□ -1.04
ERCC1-205ENST00000587888 S100A8P05109 93 aa8.54□□□□□ -1.04
ERCC1-205ENST00000587888 KIAA0087Q14695 138 aa8.54□□□□□ -1.04
ERCC1-205ENST00000587888 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
ERCC1-205ENST00000587888 M0QXV9 152 aa8.53□□□□□ -1.04
ERCC1-205ENST00000587888 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
ERCC1-205ENST00000587888 PEA15Q15121 130 aa8.53□□□□□ -1.04
ERCC1-205ENST00000587888 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
ERCC1-205ENST00000587888 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
ERCC1-205ENST00000587888 A0A1B0GXF2 115 aa8.52□□□□□ -1.05
ERCC1-205ENST00000587888 PPBPP02775 128 aa8.52□□□□□ -1.05
ERCC1-205ENST00000587888 UBE2D1P51668 147 aa8.52□□□□□ -1.05
ERCC1-205ENST00000587888 TMEM136Q6ZRR5 245 aa8.52□□□□□ -1.05
ERCC1-205ENST00000587888 IGLV4-3A0A075B6K6 122 aa8.51□□□□□ -1.05
ERCC1-205ENST00000587888 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
ERCC1-205ENST00000587888 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
ERCC1-205ENST00000587888 PACRGQ96M98 296 aaPredicted RBP8.51□□□□□ -1.05
ERCC1-205ENST00000587888 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
ERCC1-205ENST00000587888 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 PRR4Q16378 134 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 ZC2HC1BQ5TFG8 222 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 TMEM141Q96I45 108 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
ERCC1-205ENST00000587888 TEX43Q6ZNM6 134 aa8.49□□□□□ -1.05
ERCC1-205ENST00000587888 TOMM7Q9P0U1 55 aa8.48□□□□□ -1.05
ERCC1-205ENST00000587888 PRSS2P07478 247 aa8.47□□□□□ -1.05
ERCC1-205ENST00000587888 CKS1BP61024 79 aa8.47□□□□□ -1.05
ERCC1-205ENST00000587888 LINC00469Q8N7U9 141 aa8.47□□□□□ -1.05
ERCC1-205ENST00000587888 C2orf88Q9BSF0 95 aa8.47□□□□□ -1.05
ERCC1-205ENST00000587888 RPL13AP40429 203 aaKnown RBP8.46□□□□□ -1.06
ERCC1-205ENST00000587888 C6orf226Q5I0X4 101 aa8.46□□□□□ -1.06
ERCC1-205ENST00000587888 VCX2Q9H322 139 aa8.46□□□□□ -1.06
ERCC1-205ENST00000587888 LPAP08519 4548 aa8.46□□□□□ -1.06
ERCC1-205ENST00000587888 PRSS47A8MTI9 375 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 C2orf66Q6UXQ4 117 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 Q6ZN92 141 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 LINC01561Q8N1V8 128 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 MAP1LC3AQ9H492 121 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 C22orf24Q9Y442 160 aa8.45□□□□□ -1.06
ERCC1-205ENST00000587888 ZNF861PO60384 105 aa8.44□□□□□ -1.06
ERCC1-205ENST00000587888 TSPAN13O95857 204 aa8.44□□□□□ -1.06
ERCC1-205ENST00000587888 ATP5L2Q7Z4Y8 100 aa8.44□□□□□ -1.06
ERCC1-205ENST00000587888 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
ERCC1-205ENST00000587888 CYSLTR1Q9Y271 337 aa8.44□□□□□ -1.06
ERCC1-205ENST00000587888 LINC00173Q6ZV60 143 aa8.43□□□□□ -1.06
ERCC1-205ENST00000587888 Q8N8P6 123 aa8.43□□□□□ -1.06
ERCC1-205ENST00000587888 AMELXQ99217 191 aa8.43□□□□□ -1.06
ERCC1-205ENST00000587888 ALKBH7Q9BT30 221 aaPredicted RBP8.43□□□□□ -1.06
ERCC1-205ENST00000587888 CARHSP1Q9Y2V2 147 aaKnown RBP8.43□□□□□ -1.06
ERCC1-205ENST00000587888 A0A1B0GVG6 124 aa8.42□□□□□ -1.06
ERCC1-205ENST00000587888 LBHQ53QV2 105 aaPredicted RBP8.42□□□□□ -1.06
ERCC1-205ENST00000587888 CTDSP1Q9GZU7 261 aa8.42□□□□□ -1.06
ERCC1-205ENST00000587888 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
ERCC1-205ENST00000587888 Q8IZM0 81 aa8.41□□□□□ -1.06
ERCC1-205ENST00000587888 IGIPA6NJ69 53 aa8.4□□□□□ -1.06
ERCC1-205ENST00000587888 NUPR1O60356 82 aa8.4□□□□□ -1.06
ERCC1-205ENST00000587888 ORMDL2Q53FV1 153 aa8.4□□□□□ -1.06
ERCC1-205ENST00000587888 CDKN2A-AS1Q9UH64 79 aa8.4□□□□□ -1.06
ERCC1-205ENST00000587888 HERVK_113P63121 156 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms