RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 TMEM101Q96IK0 257 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 TMEM243Q9BU79 118 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 CHCHD7Q9BUK0 85 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 CST9LQ9H4G1 147 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 HHLA3Q9XRX5 114 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 UBE2D4Q9Y2X8 147 aa5.42□□□□□ -1.54
VMP1-204ENST00000587259 IGLV4-3A0A075B6K6 122 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 TRAV26-1A0A087WT03 109 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 GAGE12JA6NER3 117 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 C11orf86A6NJI1 115 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 E9PLD3 99 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 LINC00694P0DN24 101 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 NMUP48645 174 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 GAGE1Q13065 139 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 GAGE4Q13068 117 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 GAGE5Q13069 117 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 GAGE13Q4V321 117 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 AMMECR1LQ6DCA0 310 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 AMELXQ99217 191 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
VMP1-204ENST00000587259 FUSP35637 526 aaKnown RBP eCLIP5.4□□□□□ -1.54
VMP1-204ENST00000587259 ANKRD39Q53RE8 183 aa5.4□□□□□ -1.54
VMP1-204ENST00000587259 STPG4Q8N801 248 aa5.4□□□□□ -1.54
VMP1-204ENST00000587259 CHAC1Q9BUX1 264 aa5.4□□□□□ -1.54
VMP1-204ENST00000587259 HIGD1BQ9P298 99 aa5.4□□□□□ -1.54
VMP1-204ENST00000587259 IGLV4-69A0A075B6H9 119 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 TRBV6-8A0A0A6YYG3 113 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 IGHV3-38A0A0C4DH36 116 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 H3BRM9 83 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 CDK2AP2O75956 126 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 Q8N1X5 172 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 OR5A1Q8NGJ0 315 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 ATP6V0E2Q8NHE4 81 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 HERC1Q15751 4861 aa5.39□□□□□ -1.55
VMP1-204ENST00000587259 APOBP04114 4563 aaKnown RBP5.39□□□□□ -1.55
VMP1-204ENST00000587259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.38□□□□□ -1.55
VMP1-204ENST00000587259 NBDYA0A0U1RRE5 68 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 IGKV2-29A2NJV5 120 aaPredicted RBP5.38□□□□□ -1.55
VMP1-204ENST00000587259 H3BNG1 76 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 FGF6P10767 208 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 GYPEP15421 78 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 HERVK_113P63121 156 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 CTAG1AP78358 180 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 HSD52Q0P140 79 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 MRPL23Q16540 153 aaKnown RBP5.38□□□□□ -1.55
VMP1-204ENST00000587259 COL5A1-AS1Q5SY13 56 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 TMEM170BQ5T4T1 132 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 PLEKHB2Q96CS7 222 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 KRTAP1-5Q9BYS1 174 aa5.38□□□□□ -1.55
VMP1-204ENST00000587259 GEMIN7Q9H840 131 aaKnown RBP5.38□□□□□ -1.55
VMP1-204ENST00000587259 H3BS24 57 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 CCL25O15444 150 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 TIRAPP58753 221 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 TAL2Q16559 108 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 Q6ZUT4 128 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 FAM19A3Q7Z5A8 133 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 C6orf223Q8N319 242 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 SNHG12Q9BXW3 62 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 LINC00588Q9Y4M8 146 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 ICOSQ9Y6W8 199 aa5.37□□□□□ -1.55
VMP1-204ENST00000587259 MYMXA0A1B0GTQ4 84 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 F5H768 121 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 LEPROTO15243 131 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 LGALS3P17931 250 aaKnown RBP5.36□□□□□ -1.55
VMP1-204ENST00000587259 UBE2D1P51668 147 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 NTM-AS1Q6ZSK4 140 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 CHCHD5Q9BSY4 110 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 KRTAP4-2Q9BYR5 136 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 Q9UF83 564 aa5.36□□□□□ -1.55
VMP1-204ENST00000587259 DNAH5Q8TE73 4624 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 IGLV5-45A0A087WSX0 123 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 IGKV2D-26A0A0A0MRZ7 120 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 TRAV8-6A0A0B4J262 113 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 LOC100131303A0A0U1RQF7 123 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 A0A1B0GUV1 79 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 TMEM223A0PJW6 202 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 A6NDN8 102 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 ZNF22P17026 224 aaPredicted RBP5.35□□□□□ -1.55
VMP1-204ENST00000587259 PCP2Q8IVA1 136 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 DEFB104AQ8WTQ1 72 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 CDC42SE2Q9NRR3 84 aa5.35□□□□□ -1.55
VMP1-204ENST00000587259 A0A0J9YXV3 536 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 ZNF815PA8K554 130 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 J3QQQ9 107 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 GCSHP23434 173 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 BATFQ16520 125 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 SFTA2Q6UW10 78 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 SCGB1D4Q6XE38 83 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 C2orf91Q6ZV80 131 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 LINC00469Q8N7U9 141 aa5.34□□□□□ -1.55
VMP1-204ENST00000587259 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
VMP1-204ENST00000587259 IGHV1-58A0A0C4DH39 117 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 A0A0J9YY99 117 aa5.33□□□□□ -1.56
VMP1-204ENST00000587259 HINT1P49773 126 aaPredicted RBP5.33□□□□□ -1.56
VMP1-204ENST00000587259 MPV17L2Q567V2 206 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms