RNA–Protein interactions for RNA: ENST00000587223.1

NPC1-206, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-206ENST00000587223 COLCA2A8K830 154 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 COX7A2LO14548 114 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 TRGC2P03986 189 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 ERASQ7Z444 233 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 TIMM17AQ99595 171 aa4.27□□□□□ -1.73
NPC1-206ENST00000587223 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.26□□□□□ -1.73
NPC1-206ENST00000587223 SCO1O75880 301 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 CDK2AP2O75956 126 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 APOMO95445 188 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 LINC01620Q4KN68 170 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 BAGE3Q86Y29 109 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 C9orf163Q8N9P6 203 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 AMELXQ99217 191 aa4.26□□□□□ -1.73
NPC1-206ENST00000587223 PKD1P98161 4303 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 GVQW2A0A096LPI5 108 aaPredicted RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 IGHV3OR16-9A0A0B4J2B5 98 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 HBDP02042 147 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 SLPIP03973 132 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 UBE2D1P51668 147 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 NDUFA6P56556 154 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 CNBPP62633 177 aaKnown RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 SEC11AP67812 179 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 COX6A2Q02221 97 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 LINC00242Q5T6M2 205 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
NPC1-206ENST00000587223 GEMIN7Q9H840 131 aaKnown RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 EPPK1P58107 5090 aaKnown RBP4.25□□□□□ -1.73
NPC1-206ENST00000587223 HSBP1O75506 76 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 ATP5LO75964 103 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 PLA2G1BP04054 148 aaKnown RBP4.24□□□□□ -1.73
NPC1-206ENST00000587223 S100A1P23297 94 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 XGP55808 180 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 PMVKQ15126 192 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 LINC00173Q6ZV60 143 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 DPH3Q96FX2 82 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 CST9LQ9H4G1 147 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 FAM30AQ9NZY2 134 aa4.24□□□□□ -1.73
NPC1-206ENST00000587223 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 IGHV3-64A0A075B6Q5 118 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 A0A087WZ39 114 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 A0A096LNJ9 63 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 A0A0J9YXV3 536 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 HERVK_113P63121 156 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 SYCNQ0VAF6 134 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 PDZD11Q5EBL8 140 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 SDIM1Q6ZPB5 146 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 FAM19A3Q7Z5A8 133 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 LINC01561Q8N1V8 128 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 OR10D4PQ8NGN7 298 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 ORAOV1Q8WV07 137 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 CAMK2N2Q96S95 79 aa4.23□□□□□ -1.73
NPC1-206ENST00000587223 SPAG11BQ08648 103 aa4.22□□□□□ -1.73
NPC1-206ENST00000587223 FAM19A2Q8N3H0 131 aa4.22□□□□□ -1.73
NPC1-206ENST00000587223 C2orf48Q96LS8 159 aa4.22□□□□□ -1.73
NPC1-206ENST00000587223 CARD19Q96LW7 228 aa4.22□□□□□ -1.73
NPC1-206ENST00000587223 PACRGQ96M98 296 aaPredicted RBP4.22□□□□□ -1.73
NPC1-206ENST00000587223 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
NPC1-206ENST00000587223 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 F8WDY8 70 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 ATP6V1G1O75348 118 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 SERF1AO75920 110 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.74
NPC1-206ENST00000587223 PRSS2P07478 247 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 HAMPP81172 84 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 Q6ZRU5 148 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 Q6ZSA8 131 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 LINC00469Q8N7U9 141 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 CHAC1Q9BUX1 264 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 TOMM7Q9P0U1 55 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 CDKN2A-AS1Q9UH64 79 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 PKIGQ9Y2B9 76 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 HECTD4Q9Y4D8 3996 aa4.21□□□□□ -1.74
NPC1-206ENST00000587223 H3BRM9 83 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 NDUFA1O15239 70 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 NUPR1O60356 82 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BKO60814 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 LEPROTL1O95214 131 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BJP06899 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BOP23527 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BBP33778 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BDP58876 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 CKS1BP61024 79 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BCP62807 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST2H2BEQ16778 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 C6orf226Q5I0X4 101 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BHQ93079 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BNQ99877 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 HIST1H2BMQ99879 126 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.2□□□□□ -1.74
NPC1-206ENST00000587223 PKHD1P08F94 4074 aa4.2□□□□□ -1.74
NPC1-206ENST00000587223 DYNC1H1Q14204 4646 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms