RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 TMEM241Q24JQ0 296 aa8.39□□□□□ -1.07
CXXC1-208ENST00000587170 KIR2DL4Q99706 377 aa8.39□□□□□ -1.07
CXXC1-208ENST00000587170 SMKR1H3BMG3 65 aa8.37□□□□□ -1.07
CXXC1-208ENST00000587170 PPP1R2P9O14990 202 aa8.37□□□□□ -1.07
CXXC1-208ENST00000587170 UNQ6190/PRO20217Q6UXQ8 127 aa8.37□□□□□ -1.07
CXXC1-208ENST00000587170 TMEM18Q96B42 140 aa8.37□□□□□ -1.07
CXXC1-208ENST00000587170 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
CXXC1-208ENST00000587170 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
CXXC1-208ENST00000587170 KIAA0087Q14695 138 aa8.36□□□□□ -1.07
CXXC1-208ENST00000587170 UBE2BP63146 152 aa8.35□□□□□ -1.07
CXXC1-208ENST00000587170 SPANXA1Q9NS26 97 aa8.35□□□□□ -1.07
CXXC1-208ENST00000587170 TRBV24-1A0A075B6N3 115 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 TCAPO15273 167 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 ZNF861PO60384 105 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
CXXC1-208ENST00000587170 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
CXXC1-208ENST00000587170 LINC01551Q86U37 167 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 SLC51BQ86UW2 128 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 C20orf78Q9BR46 151 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
CXXC1-208ENST00000587170 OSTCQ9NRP0 149 aa8.33□□□□□ -1.08
CXXC1-208ENST00000587170 RIGQ13278 110 aa8.32□□□□□ -1.08
CXXC1-208ENST00000587170 A0A087X002 238 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 IFITM10A6NMD0 228 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 NUPR1O60356 82 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 HBBP68871 147 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
CXXC1-208ENST00000587170 FAM104BQ5XKR9 115 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 V9GYV3 84 aa8.31□□□□□ -1.08
CXXC1-208ENST00000587170 TGIF2-C20orf24A0A0A6YYL0 155 aa8.3□□□□□ -1.08
CXXC1-208ENST00000587170 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
CXXC1-208ENST00000587170 SMIM7Q9BQ49 75 aa8.3□□□□□ -1.08
CXXC1-208ENST00000587170 SMIM2Q9BVW6 85 aa8.3□□□□□ -1.08
CXXC1-208ENST00000587170 TSPAN13O95857 204 aa8.29□□□□□ -1.08
CXXC1-208ENST00000587170 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
CXXC1-208ENST00000587170 TNFRSF6BO95407 300 aa8.27□□□□□ -1.09
CXXC1-208ENST00000587170 LINC00242Q5T6M2 205 aa8.27□□□□□ -1.09
CXXC1-208ENST00000587170 TCTE3Q8IZS6 198 aa8.27□□□□□ -1.09
CXXC1-208ENST00000587170 LINC01561Q8N1V8 128 aa8.27□□□□□ -1.09
CXXC1-208ENST00000587170 NAT8BQ9UHF3 227 aa8.27□□□□□ -1.09
CXXC1-208ENST00000587170 CEBPGP53567 150 aa8.26□□□□□ -1.09
CXXC1-208ENST00000587170 BLOC1S1P78537 153 aa8.26□□□□□ -1.09
CXXC1-208ENST00000587170 TPRXLQ17RH7 258 aa8.26□□□□□ -1.09
CXXC1-208ENST00000587170 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
CXXC1-208ENST00000587170 A0A1B0GW15 77 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 CRYGAP11844 174 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 CKS2P33552 79 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 FAM74A3Q4VXF1 159 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 PACRGQ96M98 296 aaPredicted RBP8.25□□□□□ -1.09
CXXC1-208ENST00000587170 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
CXXC1-208ENST00000587170 ZNF727A8MUV8 499 aa8.24□□□□□ -1.09
CXXC1-208ENST00000587170 RPL28P46779 137 aaKnown RBP8.24□□□□□ -1.09
CXXC1-208ENST00000587170 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
CXXC1-208ENST00000587170 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
CXXC1-208ENST00000587170 IGLV4-3A0A075B6K6 122 aa8.23□□□□□ -1.09
CXXC1-208ENST00000587170 SMIM27A0A1W2PRY6 76 aa8.23□□□□□ -1.09
CXXC1-208ENST00000587170 BCE1O60756 84 aa8.23□□□□□ -1.09
CXXC1-208ENST00000587170 NPYP01303 97 aa8.23□□□□□ -1.09
CXXC1-208ENST00000587170 IFI27P40305 119 aaPredicted RBP8.23□□□□□ -1.09
CXXC1-208ENST00000587170 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
CXXC1-208ENST00000587170 D6R8Y8 96 aa8.22□□□□□ -1.09
CXXC1-208ENST00000587170 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
CXXC1-208ENST00000587170 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
CXXC1-208ENST00000587170 SRP19P09132 144 aaKnown RBP8.21□□□□□ -1.1
CXXC1-208ENST00000587170 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.1
CXXC1-208ENST00000587170 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.1
CXXC1-208ENST00000587170 PPBPP02775 128 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 CTAG1AP78358 180 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 MRPL55Q7Z7F7 128 aaKnown RBP8.2□□□□□ -1.1
CXXC1-208ENST00000587170 Q8IZM0 81 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
CXXC1-208ENST00000587170 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
CXXC1-208ENST00000587170 A0A1B0GXF2 115 aa8.19□□□□□ -1.1
CXXC1-208ENST00000587170 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
CXXC1-208ENST00000587170 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
CXXC1-208ENST00000587170 TEX43Q6ZNM6 134 aa8.19□□□□□ -1.1
CXXC1-208ENST00000587170 FAM19A3Q7Z5A8 133 aa8.19□□□□□ -1.1
CXXC1-208ENST00000587170 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
CXXC1-208ENST00000587170 CKS1BP61024 79 aa8.18□□□□□ -1.1
CXXC1-208ENST00000587170 Q6ZN92 141 aa8.18□□□□□ -1.1
CXXC1-208ENST00000587170 LINC00304Q8N9R0 145 aa8.18□□□□□ -1.1
CXXC1-208ENST00000587170 AMELXQ99217 191 aa8.18□□□□□ -1.1
CXXC1-208ENST00000587170 CDIP1Q9H305 208 aa8.18□□□□□ -1.1
CXXC1-208ENST00000587170 F8W036 122 aa8.17□□□□□ -1.1
CXXC1-208ENST00000587170 S100A8P05109 93 aa8.17□□□□□ -1.1
CXXC1-208ENST00000587170 PRSS2P07478 247 aa8.17□□□□□ -1.1
CXXC1-208ENST00000587170 C2orf88Q9BSF0 95 aa8.17□□□□□ -1.1
CXXC1-208ENST00000587170 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
CXXC1-208ENST00000587170 F8VRH5 84 aa8.16□□□□□ -1.1
CXXC1-208ENST00000587170 NPSP0C0P6 89 aa8.16□□□□□ -1.1
CXXC1-208ENST00000587170 RAB5AP20339 215 aa8.16□□□□□ -1.1
CXXC1-208ENST00000587170 ANAPC11Q9NYG5 84 aa8.16□□□□□ -1.1
CXXC1-208ENST00000587170 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
CXXC1-208ENST00000587170 ADIRFQ15847 76 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms