RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 CHTF8P0CG12 524 aa12.91□□□□□ -0.34
VAT1-203ENST00000587062 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
VAT1-203ENST00000587062 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
VAT1-203ENST00000587062 C2orf88Q9BSF0 95 aa12.91□□□□□ -0.34
VAT1-203ENST00000587062 DNAH8Q96JB1 4490 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 F8WDY8 70 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 TEX43Q6ZNM6 134 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
VAT1-203ENST00000587062 PLAC8Q9NZF1 115 aa12.9□□□□□ -0.34
VAT1-203ENST00000587062 FAT1Q14517 4588 aa12.89□□□□□ -0.35
VAT1-203ENST00000587062 NPSP0C0P6 89 aa12.89□□□□□ -0.35
VAT1-203ENST00000587062 PAPPA-AS1Q5QFB9 102 aa12.89□□□□□ -0.35
VAT1-203ENST00000587062 C2orf66Q6UXQ4 117 aa12.89□□□□□ -0.35
VAT1-203ENST00000587062 LOC107984640A0A0U1RRK4 108 aa12.88□□□□□ -0.35
VAT1-203ENST00000587062 SPAG11BQ08648 103 aa12.88□□□□□ -0.35
VAT1-203ENST00000587062 RHEBQ15382 184 aa12.88□□□□□ -0.35
VAT1-203ENST00000587062 STPG4Q8N801 248 aa12.88□□□□□ -0.35
VAT1-203ENST00000587062 GNB1LQ9BYB4 327 aa12.88□□□□□ -0.35
VAT1-203ENST00000587062 SRRM2Q9UQ35 2752 aaKnown RBP12.88□□□□□ -0.35
VAT1-203ENST00000587062 VCX2Q9H322 139 aa12.87□□□□□ -0.35
VAT1-203ENST00000587062 IGLV4-3A0A075B6K6 122 aa12.86□□□□□ -0.35
VAT1-203ENST00000587062 A0A096LNI7 61 aa12.86□□□□□ -0.35
VAT1-203ENST00000587062 IGHV3OR16-9A0A0B4J2B5 98 aa12.86□□□□□ -0.35
VAT1-203ENST00000587062 ORAOV1Q8WV07 137 aa12.86□□□□□ -0.35
VAT1-203ENST00000587062 RPS10P5Q9NQ39 176 aa12.86□□□□□ -0.35
VAT1-203ENST00000587062 LINC01549A6NIU2 74 aa12.85□□□□□ -0.35
VAT1-203ENST00000587062 MT-ND6P03923 174 aa12.85□□□□□ -0.35
VAT1-203ENST00000587062 Q6ZRU5 148 aa12.85□□□□□ -0.35
VAT1-203ENST00000587062 KRTAP29-1A8MX34 341 aaPredicted RBP12.84□□□□□ -0.35
VAT1-203ENST00000587062 NDUFA5Q16718 116 aa12.84□□□□□ -0.35
VAT1-203ENST00000587062 KIAA1644Q3SXP7 199 aa12.84□□□□□ -0.35
VAT1-203ENST00000587062 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
VAT1-203ENST00000587062 FAM104AQ969W3 186 aa12.84□□□□□ -0.35
VAT1-203ENST00000587062 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
VAT1-203ENST00000587062 FLG2Q5D862 2391 aaPredicted RBP12.83□□□□□ -0.36
VAT1-203ENST00000587062 KRTAP10-4P60372 401 aaPredicted RBP12.83□□□□□ -0.36
VAT1-203ENST00000587062 SEC11AP67812 179 aa12.83□□□□□ -0.36
VAT1-203ENST00000587062 RNF151Q2KHN1 245 aa12.83□□□□□ -0.36
VAT1-203ENST00000587062 VPS13BQ7Z7G8 4022 aa12.82□□□□□ -0.36
VAT1-203ENST00000587062 NDUFA1O15239 70 aa12.82□□□□□ -0.36
VAT1-203ENST00000587062 OXTP01178 125 aa12.82□□□□□ -0.36
VAT1-203ENST00000587062 GAGE2BQ13066 116 aa12.82□□□□□ -0.36
VAT1-203ENST00000587062 A0A087WZ39 114 aa12.81□□□□□ -0.36
VAT1-203ENST00000587062 PTTG1IPP53801 180 aa12.81□□□□□ -0.36
VAT1-203ENST00000587062 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
VAT1-203ENST00000587062 FABP9Q0Z7S8 132 aa12.8□□□□□ -0.36
VAT1-203ENST00000587062 LINC01561Q8N1V8 128 aa12.8□□□□□ -0.36
VAT1-203ENST00000587062 MRPL35Q9NZE8 188 aaKnown RBP12.8□□□□□ -0.36
VAT1-203ENST00000587062 UBE2D1P51668 147 aa12.79□□□□□ -0.36
VAT1-203ENST00000587062 RPL18AQ02543 176 aaKnown RBP12.79□□□□□ -0.36
VAT1-203ENST00000587062 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
VAT1-203ENST00000587062 AMELXQ99217 191 aa12.79□□□□□ -0.36
VAT1-203ENST00000587062 TIMM17AQ99595 171 aa12.79□□□□□ -0.36
VAT1-203ENST00000587062 SMCO4Q9NRQ5 59 aa12.79□□□□□ -0.36
VAT1-203ENST00000587062 IGIPA6NJ69 53 aa12.78□□□□□ -0.36
VAT1-203ENST00000587062 MRPL18Q9H0U6 180 aaKnown RBP12.78□□□□□ -0.36
VAT1-203ENST00000587062 SNAPINO95295 136 aa12.77□□□□□ -0.37
VAT1-203ENST00000587062 PRSS2P07478 247 aa12.77□□□□□ -0.37
VAT1-203ENST00000587062 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
VAT1-203ENST00000587062 ERASQ7Z444 233 aa12.77□□□□□ -0.37
VAT1-203ENST00000587062 SCGB3A1Q96QR1 104 aa12.77□□□□□ -0.37
VAT1-203ENST00000587062 ALKBH7Q9BT30 221 aaPredicted RBP12.77□□□□□ -0.37
VAT1-203ENST00000587062 DMBT1Q9UGM3 2413 aaPredicted RBP12.77□□□□□ -0.37
VAT1-203ENST00000587062 APOC3P02656 99 aa12.76□□□□□ -0.37
VAT1-203ENST00000587062 HERVK_113P63121 156 aa12.76□□□□□ -0.37
VAT1-203ENST00000587062 SVBPQ8N300 66 aa12.76□□□□□ -0.37
VAT1-203ENST00000587062 GEMIN7Q9H840 131 aaKnown RBP12.76□□□□□ -0.37
VAT1-203ENST00000587062 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.75□□□□□ -0.37
VAT1-203ENST00000587062 PACRGQ96M98 296 aaPredicted RBP12.75□□□□□ -0.37
VAT1-203ENST00000587062 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
VAT1-203ENST00000587062 LINC00173Q6ZV60 143 aa12.73□□□□□ -0.37
VAT1-203ENST00000587062 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
VAT1-203ENST00000587062 A0A0J9YXV3 536 aa12.72□□□□□ -0.37
VAT1-203ENST00000587062 TRBV30A0A0K0K1B3 111 aa12.72□□□□□ -0.37
VAT1-203ENST00000587062 CKS1BP61024 79 aa12.72□□□□□ -0.37
VAT1-203ENST00000587062 UNQ6190/PRO20217Q6UXQ8 127 aa12.72□□□□□ -0.37
VAT1-203ENST00000587062 LINC01546A6NGU7 62 aa12.71□□□□□ -0.37
VAT1-203ENST00000587062 C6orf226Q5I0X4 101 aa12.71□□□□□ -0.37
VAT1-203ENST00000587062 ZC2HC1BQ5TFG8 222 aa12.71□□□□□ -0.37
VAT1-203ENST00000587062 Q6ZRP5 223 aa12.71□□□□□ -0.37
VAT1-203ENST00000587062 TLX1NBP0CAT3 122 aa12.7□□□□□ -0.38
VAT1-203ENST00000587062 TOMM7Q9P0U1 55 aa12.7□□□□□ -0.38
VAT1-203ENST00000587062 HNRNPA3P51991 378 aaKnown RBP12.69□□□□□ -0.38
VAT1-203ENST00000587062 PRR3P79522 188 aaKnown RBP12.69□□□□□ -0.38
VAT1-203ENST00000587062 KIAA0087Q14695 138 aa12.69□□□□□ -0.38
VAT1-203ENST00000587062 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
VAT1-203ENST00000587062 C6orf48Q9UBA6 75 aa12.68□□□□□ -0.38
VAT1-203ENST00000587062 RAB5BP61020 215 aa12.67□□□□□ -0.38
VAT1-203ENST00000587062 C10orf25Q5T742 122 aa12.67□□□□□ -0.38
VAT1-203ENST00000587062 Q8IZM0 81 aa12.67□□□□□ -0.38
VAT1-203ENST00000587062 GAGE2EQ4V326 116 aa12.66□□□□□ -0.38
VAT1-203ENST00000587062 LINC00469Q8N7U9 141 aa12.66□□□□□ -0.38
VAT1-203ENST00000587062 GAGE2DQ9UEU5 116 aa12.66□□□□□ -0.38
VAT1-203ENST00000587062 TINCRA0A1B0GVN0 87 aa12.65□□□□□ -0.38
VAT1-203ENST00000587062 A0A1W2PNN7 141 aa12.65□□□□□ -0.38
VAT1-203ENST00000587062 LINC00614P0C842 121 aa12.65□□□□□ -0.38
VAT1-203ENST00000587062 CXCL5P42830 114 aa12.65□□□□□ -0.38
VAT1-203ENST00000587062 PMVKQ15126 192 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms