RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 CARD19Q96LW7 228 aa13.18□□□□□ -0.3
CIRBP-209ENST00000586555 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
CIRBP-209ENST00000586555 SYCNQ0VAF6 134 aa13.17□□□□□ -0.3
CIRBP-209ENST00000586555 C2orf66Q6UXQ4 117 aa13.17□□□□□ -0.3
CIRBP-209ENST00000586555 Q6ZN92 141 aa13.17□□□□□ -0.3
CIRBP-209ENST00000586555 TMEM141Q96I45 108 aa13.17□□□□□ -0.3
CIRBP-209ENST00000586555 KRTAP10-4P60372 401 aaPredicted RBP13.16□□□□□ -0.3
CIRBP-209ENST00000586555 NDUFA5Q16718 116 aa13.16□□□□□ -0.3
CIRBP-209ENST00000586555 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
CIRBP-209ENST00000586555 FAM104AQ969W3 186 aa13.16□□□□□ -0.3
CIRBP-209ENST00000586555 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 PANO1I0J062 215 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 MT-ND6P03923 174 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 PRSS3P2Q8NHM4 247 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 SPACA4Q8TDM5 124 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 LINC00526Q96FQ7 95 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 C2orf88Q9BSF0 95 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 LINC00474Q9P2X8 69 aa13.15□□□□□ -0.3
CIRBP-209ENST00000586555 IGLV4-3A0A075B6K6 122 aa13.14□□□□□ -0.31
CIRBP-209ENST00000586555 TGIF2-C20orf24A0A0A6YYL0 155 aa13.14□□□□□ -0.31
CIRBP-209ENST00000586555 J3QL48 77 aa13.14□□□□□ -0.31
CIRBP-209ENST00000586555 NPSP0C0P6 89 aa13.14□□□□□ -0.31
CIRBP-209ENST00000586555 OR10D4PQ8NGN7 298 aa13.14□□□□□ -0.31
CIRBP-209ENST00000586555 A0A087WYN8 130 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 CHTF8P0CG12 524 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 RPL37AP61513 92 aaKnown RBP13.13□□□□□ -0.31
CIRBP-209ENST00000586555 PAPPA-AS1Q5QFB9 102 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 C2orf48Q96LS8 159 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 CAMK2N2Q96S95 79 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 VCX2Q9H322 139 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 PKHD1L1Q86WI1 4243 aa13.13□□□□□ -0.31
CIRBP-209ENST00000586555 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
CIRBP-209ENST00000586555 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
CIRBP-209ENST00000586555 SNAPINO95295 136 aa13.12□□□□□ -0.31
CIRBP-209ENST00000586555 APOC3P02656 99 aa13.12□□□□□ -0.31
CIRBP-209ENST00000586555 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
CIRBP-209ENST00000586555 SVBPQ8N300 66 aa13.11□□□□□ -0.31
CIRBP-209ENST00000586555 LINC01549A6NIU2 74 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 F8WDY8 70 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 SPAG11BQ08648 103 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 FABP9Q0Z7S8 132 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 ORAOV1Q8WV07 137 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 ALKBH7Q9BT30 221 aaPredicted RBP13.1□□□□□ -0.31
CIRBP-209ENST00000586555 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
CIRBP-209ENST00000586555 PLAC8Q9NZF1 115 aa13.1□□□□□ -0.31
CIRBP-209ENST00000586555 A0A096LNI7 61 aa13.08□□□□□ -0.32
CIRBP-209ENST00000586555 LOC107984640A0A0U1RRK4 108 aa13.08□□□□□ -0.32
CIRBP-209ENST00000586555 LINC00242Q5T6M2 205 aa13.08□□□□□ -0.32
CIRBP-209ENST00000586555 Q6ZRU5 148 aa13.08□□□□□ -0.32
CIRBP-209ENST00000586555 IGIPA6NJ69 53 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 STPG4Q8N801 248 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 C7orf33Q8WU49 177 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 AMELXQ99217 191 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 TIMM17AQ99595 171 aa13.07□□□□□ -0.32
CIRBP-209ENST00000586555 A0A087WZ39 114 aa13.06□□□□□ -0.32
CIRBP-209ENST00000586555 UBE2D1P51668 147 aa13.06□□□□□ -0.32
CIRBP-209ENST00000586555 SEC11AP67812 179 aa13.06□□□□□ -0.32
CIRBP-209ENST00000586555 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
CIRBP-209ENST00000586555 HMCN2Q8NDA2 5059 aa13.05□□□□□ -0.32
CIRBP-209ENST00000586555 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
CIRBP-209ENST00000586555 FA2HQ7L5A8 372 aa13.05□□□□□ -0.32
CIRBP-209ENST00000586555 ERASQ7Z444 233 aa13.05□□□□□ -0.32
CIRBP-209ENST00000586555 NDUFA1O15239 70 aa13.04□□□□□ -0.32
CIRBP-209ENST00000586555 LINC01561Q8N1V8 128 aa13.04□□□□□ -0.32
CIRBP-209ENST00000586555 SCGB3A1Q96QR1 104 aa13.04□□□□□ -0.32
CIRBP-209ENST00000586555 TRAPPC1Q9Y5R8 145 aa13.04□□□□□ -0.32
CIRBP-209ENST00000586555 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
CIRBP-209ENST00000586555 GAGE2BQ13066 116 aa13.03□□□□□ -0.32
CIRBP-209ENST00000586555 PTTG1IPP53801 180 aa13.02□□□□□ -0.33
CIRBP-209ENST00000586555 LINC00173Q6ZV60 143 aa13.02□□□□□ -0.33
CIRBP-209ENST00000586555 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
CIRBP-209ENST00000586555 HERVK_113P63121 156 aa13.01□□□□□ -0.33
CIRBP-209ENST00000586555 ZC2HC1BQ5TFG8 222 aa13.01□□□□□ -0.33
CIRBP-209ENST00000586555 FAM19A3Q7Z5A8 133 aa13.01□□□□□ -0.33
CIRBP-209ENST00000586555 OXTP01178 125 aa13□□□□□ -0.33
CIRBP-209ENST00000586555 RPL18AQ02543 176 aaKnown RBP13□□□□□ -0.33
CIRBP-209ENST00000586555 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
CIRBP-209ENST00000586555 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-209ENST00000586555 PRSS2P07478 247 aa12.98□□□□□ -0.33
CIRBP-209ENST00000586555 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-209ENST00000586555 A0A0J9YXV3 536 aa12.96□□□□□ -0.33
CIRBP-209ENST00000586555 UNQ6190/PRO20217Q6UXQ8 127 aa12.96□□□□□ -0.33
CIRBP-209ENST00000586555 LINC00614P0C842 121 aa12.95□□□□□ -0.34
CIRBP-209ENST00000586555 RAB5BP61020 215 aa12.95□□□□□ -0.34
CIRBP-209ENST00000586555 KIAA0087Q14695 138 aa12.95□□□□□ -0.34
CIRBP-209ENST00000586555 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
CIRBP-209ENST00000586555 TRBV30A0A0K0K1B3 111 aa12.94□□□□□ -0.34
CIRBP-209ENST00000586555 CKS1BP61024 79 aa12.94□□□□□ -0.34
CIRBP-209ENST00000586555 C6orf226Q5I0X4 101 aa12.94□□□□□ -0.34
CIRBP-209ENST00000586555 C18orf32Q8TCD1 76 aa12.94□□□□□ -0.34
CIRBP-209ENST00000586555 TOMM7Q9P0U1 55 aa12.94□□□□□ -0.34
CIRBP-209ENST00000586555 TLX1NBP0CAT3 122 aa12.93□□□□□ -0.34
CIRBP-209ENST00000586555 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
CIRBP-209ENST00000586555 C10orf25Q5T742 122 aa12.93□□□□□ -0.34
CIRBP-209ENST00000586555 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
CIRBP-209ENST00000586555 CDKN2A-AS1Q9UH64 79 aa12.93□□□□□ -0.34
CIRBP-209ENST00000586555 TINCRA0A1B0GVN0 87 aa12.92□□□□□ -0.34
CIRBP-209ENST00000586555 PMVKQ15126 192 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms