RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 C16orf90A8MZG2 172 aa5.28□□□□□ -1.56
SMAD4-204ENST00000586253 RPL39P62891 51 aaKnown RBP5.28□□□□□ -1.56
SMAD4-204ENST00000586253 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
SMAD4-204ENST00000586253 BAALCQ8WXS3 180 aa5.28□□□□□ -1.56
SMAD4-204ENST00000586253 CHCHD10Q8WYQ3 142 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-204ENST00000586253 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
SMAD4-204ENST00000586253 IGKV3OR2-268A0A0C4DH90 116 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 LINC00959A0A1B0GUT2 108 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 C1orf196B1AJZ1 125 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 PRYO14603 147 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 WFDC2Q14508 124 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 SS18Q15532 418 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 Q6ZUT4 128 aa5.27□□□□□ -1.57
SMAD4-204ENST00000586253 DNAH11Q96DT5 4516 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 USP17L23D6RBM5 183 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 LECT2O14960 151 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 CD164L2Q6UWJ8 174 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 FA2HQ7L5A8 372 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 C18orf32Q8TCD1 76 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 TOMM6Q96B49 74 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 TMEM141Q96I45 108 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 TIMM17AQ99595 171 aa5.26□□□□□ -1.57
SMAD4-204ENST00000586253 IGLV4-3A0A075B6K6 122 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 IGIPA6NJ69 53 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 COLCA2A8K830 154 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 LINC00614P0C842 121 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 XCL1P47992 114 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 RAB5BP61020 215 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 FOXI1Q12951 378 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 RNASE13Q5GAN3 156 aaKnown RBP5.25□□□□□ -1.57
SMAD4-204ENST00000586253 PAPPA-AS1Q5QFB9 102 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 Q6ZN92 141 aa5.25□□□□□ -1.57
SMAD4-204ENST00000586253 TRAV13-1A0A0B4J241 112 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 IFITM10A6NMD0 228 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 TEX43Q6ZNM6 134 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 ERASQ7Z444 233 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 AMELXQ99217 191 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 OPRPNQ99935 248 aaPredicted RBP5.24□□□□□ -1.57
SMAD4-204ENST00000586253 C2orf88Q9BSF0 95 aa5.24□□□□□ -1.57
SMAD4-204ENST00000586253 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.23□□□□□ -1.57
SMAD4-204ENST00000586253 TRGC2P03986 189 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 PRSS1P07477 247 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 C15orf56Q8N910 161 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 CHCHD1Q96BP2 118 aaKnown RBP5.23□□□□□ -1.57
SMAD4-204ENST00000586253 URB1-AS1Q96HZ7 61 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 SCGB3A1Q96QR1 104 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 VCX2Q9H322 139 aa5.23□□□□□ -1.57
SMAD4-204ENST00000586253 DNAH5Q8TE73 4624 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 GVQW2A0A096LPI5 108 aaPredicted RBP5.22□□□□□ -1.57
SMAD4-204ENST00000586253 IGHV1-58A0A0C4DH39 117 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 COX7A2LO14548 114 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 SCO1O75880 301 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 S100A1P23297 94 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.57
SMAD4-204ENST00000586253 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
SMAD4-204ENST00000586253 LINC00173Q6ZV60 143 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 FAM19A3Q7Z5A8 133 aa5.22□□□□□ -1.57
SMAD4-204ENST00000586253 A0A096LNJ9 63 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 IGHV3OR16-9A0A0B4J2B5 98 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 APOMO95445 188 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 HBDP02042 147 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 UBE2D1P51668 147 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 SEC11AP67812 179 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 LRP1BQ9NZR2 4599 aa5.21□□□□□ -1.58
SMAD4-204ENST00000586253 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-204ENST00000586253 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.2□□□□□ -1.58
SMAD4-204ENST00000586253 KRTAP10-1P60331 282 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 PDZD11Q5EBL8 140 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 LINC00242Q5T6M2 205 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 BAGE3Q86Y29 109 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 LINC01561Q8N1V8 128 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 C9orf163Q8N9P6 203 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 BIRC6Q9NR09 4857 aa5.2□□□□□ -1.58
SMAD4-204ENST00000586253 A0A087WZ39 114 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 ATP6V1G1O75348 118 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 ATP5LO75964 103 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 HERVK_113P63121 156 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 PMVKQ15126 192 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 HIGD2BQ4VC39 106 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 ZC2HC1BQ5TFG8 222 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 OR10D4PQ8NGN7 298 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 CST9LQ9H4G1 147 aa5.19□□□□□ -1.58
SMAD4-204ENST00000586253 DYNC1H1Q14204 4646 aaKnown RBP5.19□□□□□ -1.58
SMAD4-204ENST00000586253 IGHV3-64A0A075B6Q5 118 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 F8WDY8 70 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 HSBP1O75506 76 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 COX6A2Q02221 97 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 SERTAD4-AS1Q5TG53 156 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 Q6ZSA8 131 aa5.18□□□□□ -1.58
SMAD4-204ENST00000586253 GEMIN7Q9H840 131 aaKnown RBP5.18□□□□□ -1.58
SMAD4-204ENST00000586253 IGLV5-45A0A087WSX0 123 aa5.17□□□□□ -1.58
SMAD4-204ENST00000586253 TINCRA0A1B0GVN0 87 aa5.17□□□□□ -1.58
SMAD4-204ENST00000586253 C2orf48Q96LS8 159 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms