RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 SCGB3A1Q96QR1 104 aa12.15□□□□□ -0.46
ATG4D-203ENST00000585752 VCX2Q9H322 139 aa12.15□□□□□ -0.46
ATG4D-203ENST00000585752 NPSP0C0P6 89 aa12.14□□□□□ -0.47
ATG4D-203ENST00000585752 LINC00614P0C842 121 aa12.14□□□□□ -0.47
ATG4D-203ENST00000585752 FOXI1Q12951 378 aa12.14□□□□□ -0.47
ATG4D-203ENST00000585752 FAT1Q14517 4588 aa12.14□□□□□ -0.47
ATG4D-203ENST00000585752 LINC01546A6NGU7 62 aa12.13□□□□□ -0.47
ATG4D-203ENST00000585752 COX7A2LO14548 114 aa12.13□□□□□ -0.47
ATG4D-203ENST00000585752 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
ATG4D-203ENST00000585752 SRRM2Q9UQ35 2752 aaKnown RBP12.12□□□□□ -0.47
ATG4D-203ENST00000585752 TRGC2P03986 189 aa12.12□□□□□ -0.47
ATG4D-203ENST00000585752 ERASQ7Z444 233 aa12.12□□□□□ -0.47
ATG4D-203ENST00000585752 TIMM17AQ99595 171 aa12.12□□□□□ -0.47
ATG4D-203ENST00000585752 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
ATG4D-203ENST00000585752 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
ATG4D-203ENST00000585752 SCO1O75880 301 aa12.11□□□□□ -0.47
ATG4D-203ENST00000585752 C9orf163Q8N9P6 203 aa12.11□□□□□ -0.47
ATG4D-203ENST00000585752 DPH3Q96FX2 82 aa12.11□□□□□ -0.47
ATG4D-203ENST00000585752 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
ATG4D-203ENST00000585752 COLCA2A8K830 154 aa12.1□□□□□ -0.47
ATG4D-203ENST00000585752 APOMO95445 188 aa12.1□□□□□ -0.47
ATG4D-203ENST00000585752 HIGD2BQ4VC39 106 aa12.1□□□□□ -0.47
ATG4D-203ENST00000585752 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
ATG4D-203ENST00000585752 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 HBDP02042 147 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 S100A1P23297 94 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 C5orf38Q86SI9 138 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 C15orf56Q8N910 161 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
ATG4D-203ENST00000585752 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.07□□□□□ -0.48
ATG4D-203ENST00000585752 CHCHD1Q96BP2 118 aaKnown RBP12.07□□□□□ -0.48
ATG4D-203ENST00000585752 AMELXQ99217 191 aa12.07□□□□□ -0.48
ATG4D-203ENST00000585752 IGHV3-64A0A075B6Q5 118 aa12.06□□□□□ -0.48
ATG4D-203ENST00000585752 SEC11AP67812 179 aa12.06□□□□□ -0.48
ATG4D-203ENST00000585752 PMCHL1Q16048 86 aa12.06□□□□□ -0.48
ATG4D-203ENST00000585752 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-203ENST00000585752 UBE2D1P51668 147 aa12.05□□□□□ -0.48
ATG4D-203ENST00000585752 CNBPP62633 177 aaKnown RBP12.05□□□□□ -0.48
ATG4D-203ENST00000585752 ZC2HC1BQ5TFG8 222 aa12.05□□□□□ -0.48
ATG4D-203ENST00000585752 FLG2Q5D862 2391 aaPredicted RBP12.05□□□□□ -0.48
ATG4D-203ENST00000585752 HSBP1O75506 76 aa12.04□□□□□ -0.48
ATG4D-203ENST00000585752 NDUFA6P56556 154 aa12.04□□□□□ -0.48
ATG4D-203ENST00000585752 RPL37AP61513 92 aaKnown RBP12.04□□□□□ -0.48
ATG4D-203ENST00000585752 LINC00173Q6ZV60 143 aa12.04□□□□□ -0.48
ATG4D-203ENST00000585752 URB1-AS1Q96HZ7 61 aa12.04□□□□□ -0.48
ATG4D-203ENST00000585752 GEMIN7Q9H840 131 aaKnown RBP12.04□□□□□ -0.48
ATG4D-203ENST00000585752 ATP5LO75964 103 aa12.03□□□□□ -0.48
ATG4D-203ENST00000585752 LINC00242Q5T6M2 205 aa12.03□□□□□ -0.48
ATG4D-203ENST00000585752 IGHV3OR16-9A0A0B4J2B5 98 aa12.02□□□□□ -0.49
ATG4D-203ENST00000585752 ATP6V1G1O75348 118 aa12.02□□□□□ -0.49
ATG4D-203ENST00000585752 HERVK_113P63121 156 aa12.02□□□□□ -0.49
ATG4D-203ENST00000585752 PMVKQ15126 192 aa12.02□□□□□ -0.49
ATG4D-203ENST00000585752 SDIM1Q6ZPB5 146 aa12.02□□□□□ -0.49
ATG4D-203ENST00000585752 SPAG11BQ08648 103 aa12.01□□□□□ -0.49
ATG4D-203ENST00000585752 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
ATG4D-203ENST00000585752 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
ATG4D-203ENST00000585752 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.01□□□□□ -0.49
ATG4D-203ENST00000585752 DMBT1Q9UGM3 2413 aaPredicted RBP12.01□□□□□ -0.49
ATG4D-203ENST00000585752 PACRGQ96M98 296 aaPredicted RBP12□□□□□ -0.49
ATG4D-203ENST00000585752 A0A087WZ39 114 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 A0A096LNJ9 63 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 KRTAP29-1A8MX34 341 aaPredicted RBP11.99□□□□□ -0.49
ATG4D-203ENST00000585752 COX6A2Q02221 97 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 LINC00526Q96FQ7 95 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 CST9LQ9H4G1 147 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
ATG4D-203ENST00000585752 IGLV4-69A0A075B6H9 119 aa11.98□□□□□ -0.49
ATG4D-203ENST00000585752 PDZD11Q5EBL8 140 aa11.98□□□□□ -0.49
ATG4D-203ENST00000585752 A0A0J9YXV3 536 aa11.97□□□□□ -0.49
ATG4D-203ENST00000585752 SERF1AO75920 110 aa11.97□□□□□ -0.49
ATG4D-203ENST00000585752 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
ATG4D-203ENST00000585752 FAM19A3Q7Z5A8 133 aa11.97□□□□□ -0.49
ATG4D-203ENST00000585752 LINC00469Q8N7U9 141 aa11.97□□□□□ -0.49
ATG4D-203ENST00000585752 TINCRA0A1B0GVN0 87 aa11.96□□□□□ -0.49
ATG4D-203ENST00000585752 SLPIP03973 132 aa11.96□□□□□ -0.49
ATG4D-203ENST00000585752 PRSS2P07478 247 aa11.96□□□□□ -0.49
ATG4D-203ENST00000585752 LINC01561Q8N1V8 128 aa11.96□□□□□ -0.49
ATG4D-203ENST00000585752 FAM19A2Q8N3H0 131 aa11.96□□□□□ -0.49
ATG4D-203ENST00000585752 C2orf48Q96LS8 159 aa11.95□□□□□ -0.5
ATG4D-203ENST00000585752 OXTP01178 125 aa11.94□□□□□ -0.5
ATG4D-203ENST00000585752 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
ATG4D-203ENST00000585752 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
ATG4D-203ENST00000585752 MYCBP2O75592 4640 aa11.94□□□□□ -0.5
ATG4D-203ENST00000585752 HERC1Q15751 4861 aa11.94□□□□□ -0.5
ATG4D-203ENST00000585752 F8WDY8 70 aa11.93□□□□□ -0.5
ATG4D-203ENST00000585752 H3BRM9 83 aa11.93□□□□□ -0.5
ATG4D-203ENST00000585752 NDUFA1O15239 70 aa11.93□□□□□ -0.5
ATG4D-203ENST00000585752 CDKN2A-AS1Q9UH64 79 aa11.93□□□□□ -0.5
ATG4D-203ENST00000585752 A0A087WYN8 130 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 PANO1I0J062 215 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 MAJINQ3KP22 176 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 C7orf33Q8WU49 177 aa11.92□□□□□ -0.5
ATG4D-203ENST00000585752 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BKO60814 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BJP06899 126 aa11.91□□□□□ -0.5
ATG4D-203ENST00000585752 HIST1H2BOP23527 126 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms